BP919348 |
Clone id |
YMU001_000124_A09 |
Library |
YMU01 |
Length |
411 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000124_A09. |
Accession |
BP919348 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL128Contig1 |
Sequence |
GCCGGAAATGAAGTGCAAGGAGCAAAAAAATAGGACGAACTCACATCTCATATCTTGAAG GGAATGACCTTAGCAATAATCTCCTCACTTAGATCTTGGACTTCCTTGTCGAGGCTCTTC AAAGTCTCCTGCTTCTGCACCTCTAGGTTTGCAATAGCTTCTGCAAGCTCTTTCTCTATT CTTTCGCGTGGTTCCTGAAGCTTGGCATCAAGCTTTGCTGCCGTCTCCCTCTTCATCTTG TTGAGCTCCGCCGTGGTCTCTGCACGTGCGGCCTTGAGGATCGCCTCAGCCTGCTCTTGC AGCTTCTTGATCTCGTCGGAATTGTCGCGCACACTCATAAGCTTCTGCCTGATGGCTTCA TCTCTGTCATCCATAACCTTGGCCACAGGCTTAAACCATATGTTGTCCAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P31853 |
Definition |
sp|P31853|ATPX_SPIOL ATP synthase B' chain, chloroplastic OS=Spinacia oleracea |
Align length |
117 |
Score (bit) |
127.0 |
E-value |
2.0e-29 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP919348|Adiantum capillus-veneris mRNA, clone: YMU001_000124_A09. (411 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|P31853|ATPX_SPIOL ATP synthase B' chain, chloroplastic OS=Spi... 127 2e-29 sp|P48085|ATPX_CYAPA ATP synthase B' chain, cyanelle OS=Cyanopho... 71 2e-12 sp|Q05367|ATPX_SYNP1 ATP synthase B' chain OS=Synechococcus sp. ... 69 7e-12 sp|Q1XDP2|ATPX_PORYE ATP synthase B' chain, chloroplastic OS=Por... 67 2e-11 sp|P51245|ATPX_PORPU ATP synthase B' chain, chloroplastic OS=Por... 67 2e-11 sp|P08446|ATPX_SYNP6 ATP synthase B' chain OS=Synechococcus sp. ... 60 3e-09 sp|O78478|ATPX_GUITH ATP synthase B' chain, chloroplastic OS=Gui... 60 4e-09 sp|P21904|ATPF_PROMO ATP synthase B chain, sodium ion specific O... 59 6e-09 sp|P27183|ATPX_SYNY3 ATP synthase B' chain OS=Synechocystis sp. ... 58 1e-08 sp|Q9TM29|ATPX_CYACA ATP synthase B' chain, chloroplastic OS=Cya... 57 4e-08 sp|Q02852|ATPX_ANTSP ATP synthase B' chain, chloroplastic OS=Ant... 55 8e-08 sp|P20601|ATPF_BACME ATP synthase B chain OS=Bacillus megaterium... 55 8e-08 sp|Q5SHB3|CNPD_THET8 2',3'-cyclic-nucleotide 2'-phosphodiesteras... 45 1e-04 sp|Q72HM1|CNPD_THET2 2',3'-cyclic-nucleotide 2'-phosphodiesteras... 45 1e-04 sp|P26681|ATPF_ENTHR ATP synthase B chain OS=Enterococcus hirae ... 44 2e-04 sp|O29104|VATE_ARCFU V-type ATP synthase subunit E OS=Archaeoglo... 44 3e-04 sp|Q5TZA2|CROCC_HUMAN Rootletin OS=Homo sapiens GN=CROCC PE=1 SV=1 43 4e-04 sp|A2AJI0|MA7D1_MOUSE MAP7 domain-containing protein 1 OS=Mus mu... 42 7e-04 sp|Q80UF4|SDCG8_MOUSE Serologically defined colon cancer antigen... 41 0.002 sp|Q8CJ40|CROCC_MOUSE Rootletin OS=Mus musculus GN=Crocc PE=1 SV=1 40 0.003 sp|Q49Z54|ATPF_STAS1 ATP synthase B chain OS=Staphylococcus sapr... 40 0.003 sp|Q9UPV0|CE164_HUMAN Centrosomal protein of 164 kDa OS=Homo sap... 40 0.004 sp|P57120|ATPF_BUCAI ATP synthase B chain OS=Buchnera aphidicola... 40 0.004 sp|O27351|DNAK_METTH Chaperone protein dnaK OS=Methanobacterium ... 40 0.005 sp|Q62209|SYCP1_MOUSE Synaptonemal complex protein 1 OS=Mus musc... 39 0.006 sp|Q15149|PLEC1_HUMAN Plectin-1 OS=Homo sapiens GN=PLEC1 PE=1 SV=3 39 0.006 sp|Q9JI55|PLEC1_CRIGR Plectin-1 (Fragment) OS=Cricetulus griseus... 39 0.006 sp|O51876|ATPF_BUCAP ATP synthase B chain OS=Buchnera aphidicola... 39 0.006 sp|Q48329|VATE_HALVO V-type ATP synthase subunit E OS=Halobacter... 39 0.008 sp|Q03410|SYCP1_RAT Synaptonemal complex protein 1 OS=Rattus nor... 39 0.008
>sp|P31853|ATPX_SPIOL ATP synthase B' chain, chloroplastic OS=Spinacia oleracea GN=ATPG PE=1 SV=2 Length = 222
Score = 127 bits (318), Expect = 2e-29 Identities = 59/117 (50%), Positives = 91/117 (77%) Frame = -2
Query: 410 LDNIWFKPVAKVMDDRDEAIRQKLMSVRDNSDEIKKLQEQAEAILKAARAETTAELNKMK 231 LD I++ P+ MD RD +I+++L V+D S E+K+L+EQA A+++AARAE +A LNKMK Sbjct: 104 LDKIYYTPLGDFMDKRDASIKEQLSGVKDTSSEVKQLEEQANAVMRAARAEISAALNKMK 163
Query: 230 RETAAKLDAKLQEPRERIEKELAEAIANLEVQKQETLKSLDKEVQDLSEEIIAKVIP 60 +ET +++AKL E R++IE EL EA+ +LE QK++T+KSLD ++ LS++I+ KV+P Sbjct: 164 KETQLEVEAKLAEGRKKIEVELQEALGSLEQQKEDTIKSLDSQISALSDDIVKKVLP 220
>sp|P48085|ATPX_CYAPA ATP synthase B' chain, cyanelle OS=Cyanophora paradoxa GN=atpG PE=3 SV=1 Length = 164
Score = 70.9 bits (172), Expect = 2e-12 Identities = 39/120 (32%), Positives = 66/120 (55%) Frame = -2
Query: 410 LDNIWFKPVAKVMDDRDEAIRQKLMSVRDNSDEIKKLQEQAEAILKAARAETTAELNKMK 231 L+ +++KP+ K++D+R E I+ + +L Q E + AR + N + Sbjct: 42 LNAVFYKPLIKILDERKEYIQSNFNEAEKCLAQAAELTTQYETKITDARQNASKLTNTTR 101
Query: 230 RETAAKLDAKLQEPRERIEKELAEAIANLEVQKQETLKSLDKEVQDLSEEIIAKVIPFKI 51 E + KL+E +++ + ELA A LE+QK E LKSL+ EVQ LS +I+ K++ +I Sbjct: 102 SEIQRFVSEKLEEAQKKADSELASATNKLELQKDEALKSLESEVQTLSTKILEKLLGIQI 161
>sp|Q05367|ATPX_SYNP1 ATP synthase B' chain OS=Synechococcus sp. (strain PCC 6716) GN=atpG PE=3 SV=1 Length = 159
Score = 68.9 bits (167), Expect = 7e-12 Identities = 35/116 (30%), Positives = 67/116 (57%) Frame = -2
Query: 410 LDNIWFKPVAKVMDDRDEAIRQKLMSVRDNSDEIKKLQEQAEAILKAARAETTAELNKMK 231 L+ + +KP+ + +D+RDE IR L ++ + +L Q E L R E A + + + Sbjct: 43 LNALLYKPLGQALDNRDEYIRTNLQQAKERLQQATELANQYEQELAYTRREAQAIIEEAR 102
Query: 230 RETAAKLDAKLQEPRERIEKELAEAIANLEVQKQETLKSLDKEVQDLSEEIIAKVI 63 E A++ ++ ++ EL +A A ++ QKQ TL++L+ +V LSE+++AK++ Sbjct: 103 AEAQKIATAEIAAAQQALQAELMKAQAEIDQQKQATLQALEGQVSSLSEQLLAKLL 158
>sp|Q1XDP2|ATPX_PORYE ATP synthase B' chain, chloroplastic OS=Porphyra yezoensis GN=atpG PE=3 SV=1 Length = 156
Score = 67.4 bits (163), Expect = 2e-11 Identities = 38/116 (32%), Positives = 65/116 (56%) Frame = -2
Query: 410 LDNIWFKPVAKVMDDRDEAIRQKLMSVRDNSDEIKKLQEQAEAILKAARAETTAELNKMK 231 L+ I++KPV KV+D+RDE IR L + + +L + E L AR ++ + Sbjct: 37 LNTIFYKPVTKVLDERDEYIRTTLTTASSMLVKADELAAKYEEDLSEARRNAQLKIASSQ 96
Query: 230 RETAAKLDAKLQEPRERIEKELAEAIANLEVQKQETLKSLDKEVQDLSEEIIAKVI 63 +E + +++ + EK +AEA L VQK+E LK+L+ +V LS++I K++ Sbjct: 97 KEAQNIVSEDIKKAQLNAEKLIAEASKQLNVQKEEALKTLENQVDTLSDQIKVKLL 152
>sp|P51245|ATPX_PORPU ATP synthase B' chain, chloroplastic OS=Porphyra purpurea GN=atpG PE=3 SV=1 Length = 158
Score = 67.4 bits (163), Expect = 2e-11 Identities = 35/116 (30%), Positives = 67/116 (57%) Frame = -2
Query: 410 LDNIWFKPVAKVMDDRDEAIRQKLMSVRDNSDEIKKLQEQAEAILKAARAETTAELNKMK 231 L+ I++KPV K++D+RDE IR L + + +L + E L AR + A++ + Sbjct: 37 LNTIFYKPVTKILDERDEYIRTTLTTASSMLVKADELAAKYEEDLSKARRDAQAKIAASQ 96
Query: 230 RETAAKLDAKLQEPRERIEKELAEAIANLEVQKQETLKSLDKEVQDLSEEIIAKVI 63 ++ + + +++ + EK + EA L +QK+E LK+L+ +V LS++I K++ Sbjct: 97 KDAQSIVSEDIKKAQMNAEKLITEASKQLNIQKEEALKTLEDQVDTLSDQIKTKLL 152
>sp|P08446|ATPX_SYNP6 ATP synthase B' chain OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=atpG PE=3 SV=1 Length = 158
Score = 60.1 bits (144), Expect = 3e-09 Identities = 33/116 (28%), Positives = 62/116 (53%) Frame = -2
Query: 410 LDNIWFKPVAKVMDDRDEAIRQKLMSVRDNSDEIKKLQEQAEAILKAARAETTAELNKMK 231 L+ +++KP KV+DDRD+ +R + E+K L Q E L A R ++ A + + + Sbjct: 40 LNAVFYKPFGKVLDDRDQFVRGGRQDAKARLAEVKALTAQYEQELAATRKQSQALIAEAQ 99
Query: 230 RETAAKLDAKLQEPRERIEKELAEAIANLEVQKQETLKSLDKEVQDLSEEIIAKVI 63 E +L E + + + +A ++ QK L++LD++V LS +I+ K++ Sbjct: 100 TEAGRIAAQQLAEAQREAQAQREQAQQEIDQQKAVALQALDQQVDALSHQILDKLL 155
>sp|O78478|ATPX_GUITH ATP synthase B' chain, chloroplastic OS=Guillardia theta GN=atpG PE=3 SV=1 Length = 163
Score = 59.7 bits (143), Expect = 4e-09 Identities = 33/116 (28%), Positives = 67/116 (57%) Frame = -2
Query: 410 LDNIWFKPVAKVMDDRDEAIRQKLMSVRDNSDEIKKLQEQAEAILKAARAETTAELNKMK 231 L+ +++ PVAKV+D+R+E IR+ L D + + + +Q E L R E ++ + Sbjct: 42 LNAVFYNPVAKVLDEREEYIRKNLTQASDILAKAEAITKQYEKDLAQERREAQLIISVAQ 101
Query: 230 RETAAKLDAKLQEPRERIEKELAEAIANLEVQKQETLKSLDKEVQDLSEEIIAKVI 63 +E + ++++ ++ E + EA + L QKQ+ L +L+ +V L+E+I +K++ Sbjct: 102 KEAQDIVALEIKQAQKDTELLVNEATSQLNSQKQKALSALEDQVNTLTEQIKSKLL 157
>sp|P21904|ATPF_PROMO ATP synthase B chain, sodium ion specific OS=Propionigenium modestum GN=atpF PE=1 SV=2 Length = 168
Score = 59.3 bits (142), Expect = 6e-09 Identities = 34/114 (29%), Positives = 59/114 (51%) Frame = -2
Query: 392 KPVAKVMDDRDEAIRQKLMSVRDNSDEIKKLQEQAEAILKAARAETTAELNKMKRETAAK 213 KP+AKV+D R E I L + + K +A+ I+K+A+ E L + +++ + Sbjct: 35 KPIAKVLDARKEKIANDLKQAEIDKEMAAKANGEAQGIVKSAKTEANEMLLRAEKKADER 94
Query: 212 LDAKLQEPRERIEKELAEAIANLEVQKQETLKSLDKEVQDLSEEIIAKVIPFKI 51 + L+E + EK L A +E K++ K L EV DL+ ++ K+I K+ Sbjct: 95 KETILKEANTQREKMLKSAEVEIEKMKEQARKELQLEVTDLAVKLAEKMINEKV 148
>sp|P27183|ATPX_SYNY3 ATP synthase B' chain OS=Synechocystis sp. (strain PCC 6803) GN=atpG PE=3 SV=1 Length = 143
Score = 58.2 bits (139), Expect = 1e-08 Identities = 32/116 (27%), Positives = 62/116 (53%) Frame = -2
Query: 410 LDNIWFKPVAKVMDDRDEAIRQKLMSVRDNSDEIKKLQEQAEAILKAARAETTAELNKMK 231 L+ I++KP+ KV+D+R + IR R+ + K + ++ E + AR ++ A + + Sbjct: 22 LNAIFYKPMNKVLDERADYIRTNEEDARERLAKAKAITQEYEQQITDARRQSQAVIADAQ 81
Query: 230 RETAAKLDAKLQEPRERIEKELAEAIANLEVQKQETLKSLDKEVQDLSEEIIAKVI 63 E K+ E + +++ A +E Q+Q L SL++EV LS +I+ K++ Sbjct: 82 AEARRLAAEKIAEAQRESQRQKETAAQEIEAQRQSALSSLEQEVAALSNQILHKLL 137
>sp|Q9TM29|ATPX_CYACA ATP synthase B' chain, chloroplastic OS=Cyanidium caldarium GN=atpG PE=3 SV=1 Length = 157
Score = 56.6 bits (135), Expect = 4e-08 Identities = 30/116 (25%), Positives = 69/116 (59%) Frame = -2
Query: 410 LDNIWFKPVAKVMDDRDEAIRQKLMSVRDNSDEIKKLQEQAEAILKAARAETTAELNKMK 231 LD ++KP+ KV+ DR+ I + L S S++ K+ + E ++ ++ E+ ++ +K Sbjct: 38 LDITFYKPINKVLKDRENYILKTLESATQISEKTKETLARYEEVILKSKKESQQLIDSIK 97
Query: 230 RETAAKLDAKLQEPRERIEKELAEAIANLEVQKQETLKSLDKEVQDLSEEIIAKVI 63 +T + +L + + + ++++I L +K++TLK L+++ ++LS++I K+I Sbjct: 98 TKTEHDIVNELIQTQNSTREFISKSIKELYRKKEQTLKVLEEDTENLSDKIYLKLI 153
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9T949 |
Definition |
tr|A9T949|A9T949_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
120 |
Score (bit) |
174.0 |
E-value |
2.0e-42 |
Report |
|