BP919354
Clone id YMU001_000124_B03
Library
Length 548
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000124_B03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
AGTCCCATGATTACCAAATTATCTTCATCTTTAAGATTTGGCCTCAACCTTGACAAAGTG
CTTCAAGGTTACACACATATTTTCATTTTCATGGATAAATTGTAGAGATTGGAGCTATGG
TGGGTGCAAGCGTAGCAGAGACATGGATAAGGTAGGAGAGGAGAAGTAGAGGAGTCCACA
TAAAAAAAGAGAGTTTGAGTAGGGTTTATTTGTCCTTGTATAGGCTTAATACACCTAGAG
GATGCTCACATTGAAGCCCAAGTGTGGCCTAGACCCACCAACAACTGCCCCCTTAAGCAA
GACTTGGGACAATCACTCTACAACAAATGGGTATTACAATGACAATCTGCCCCCTTCAAC
AACAATGGGTGGACATAACACGACTGGCCAACAATCAACACGGCCATTGCAACCGCAAAT
GAACATAGGATAGACATAAATTGGATTGATTGACATGCTAACACGGCTATCTTGACAACA
ATGCCTCTTTCATAACAAAGTTTTTAGGATGATAACAATGGGTTCACAACATAGGATGAG
GTGACAAG
■■Homology search results ■■ -
sp_hit_id Q7XYM4
Definition sp|Q7XYM4|UCRIA_BIGNA Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Bigelowiella natans
Align length 42
Score (bit) 31.6
E-value 2.6
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919354|Adiantum capillus-veneris mRNA, clone:
YMU001_000124_B03.
(548 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q7XYM4|UCRIA_BIGNA Cytochrome b6-f complex iron-sulfur subuni... 32 2.6

>sp|Q7XYM4|UCRIA_BIGNA Cytochrome b6-f complex iron-sulfur subunit,
chloroplastic OS=Bigelowiella natans GN=petC PE=2 SV=1
Length = 252

Score = 31.6 bits (70), Expect = 2.6
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +1

Query: 205 FICPCIGLIHLEDAHIEAQVWPRPTNNCPLKQDLGQSLYNKW 330
F CPC G + D H+ PRP ++ D G+ L + W
Sbjct: 197 FKCPCHGSQYAPDGHVVRGPAPRPLQLAHVEDDNGKILLSPW 238


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919354|Adiantum capillus-veneris mRNA, clone:
YMU001_000124_B03.
(548 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******