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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP919355
Clone id YMU001_000124_B04
Library
Length 341
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000124_B04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
TGATTTTGCACCTGATTTCTTTATCAGAGAGCTGAGGAGAAGACTAGAATAGTAGATCAA
GCTGCAACATGCTTGGACATAGCGCTACTAAGAGAGAAAAATGCCCCACGTCTATCCGGC
ATATCTCGCAGTCCAAGGAAAGTAACTACCAGATCTTAATATCCACATTAAAAGAGCCAA
TAACTCCCACAGACACACTCTAGAAAGGGCAAATTTTGCACACATATATACACAATAATC
CGAGTGCAGAATGCTAGGTATACTTTACATCAGGGTTTCTTGCCAACCTATACAGCATAC
TTCCATCCACTCCGGTAATTACCTCCTGCATTAAGCTTATC
■■Homology search results ■■ -
sp_hit_id P17556
Definition sp|P17556|DHA_BACSH Alanine dehydrogenase OS=Bacillus sphaericus
Align length 61
Score (bit) 33.1
E-value 0.44
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919355|Adiantum capillus-veneris mRNA, clone:
YMU001_000124_B04.
         (341 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P17556|DHA_BACSH Alanine dehydrogenase OS=Bacillus sphaericus...    33   0.44 
sp|Q635P1|MTNB_BACCZ Methylthioribulose-1-phosphate dehydratase ...    29   6.4  
sp|Q6HEC7|MTNB_BACHK Methylthioribulose-1-phosphate dehydratase ...    29   8.3  
sp|Q731R0|MTNB_BACC1 Methylthioribulose-1-phosphate dehydratase ...    29   8.3  
sp|Q81MJ0|MTNB_BACAN Methylthioribulose-1-phosphate dehydratase ...    29   8.3  
sp|A0RI44|MTNB_BACAH Methylthioribulose-1-phosphate dehydratase ...    29   8.3  

>sp|P17556|DHA_BACSH Alanine dehydrogenase OS=Bacillus sphaericus
           GN=ald PE=1 SV=1
          Length = 372

 Score = 33.1 bits (74), Expect = 0.44
 Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
 Frame = +3

Query: 72  LGHSATKREKCPTSIRHISQSKESNYQILISTLKEPITPT-DTL*KGQILHTYIHNNPSA 248
           +G S T  E       +    KE+  Q +I  +KEP+    D   +GQIL TY+H  P A
Sbjct: 42  IGSSFTDAEYVAAGAAYRCIGKEAWAQEMILKVKEPVASEYDYFYEGQILFTYLHLAPRA 101

Query: 249 E 251
           E
Sbjct: 102 E 102


>sp|Q635P1|MTNB_BACCZ Methylthioribulose-1-phosphate dehydratase
           OS=Bacillus cereus (strain ZK / E33L) GN=mtnB PE=3 SV=1
          Length = 212

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
 Frame = +3

Query: 153 ILISTLKEPITPTDTL*KGQ-ILHTYIHNNPSAEC*VYF---TSGFLANLYS 296
           +L+  L  P+  T+     + ILHT+I+NN +A C ++     +  + NLYS
Sbjct: 60  LLVDHLGVPVLETELRPSAETILHTHIYNNTNAGCVLHIHTTDNNVITNLYS 111


>sp|Q6HEC7|MTNB_BACHK Methylthioribulose-1-phosphate dehydratase
           OS=Bacillus thuringiensis subsp. konkukian GN=mtnB PE=3
           SV=1
          Length = 212

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
 Frame = +3

Query: 153 ILISTLKEPITPTDTL*KGQ-ILHTYIHNNPSAEC*VYF---TSGFLANLYS 296
           +L+  L  P+  T+     + ILHT+I+NN +A C ++     +  + NLYS
Sbjct: 60  LLVDHLGVPVLETELRPSAETILHTHIYNNTNAGCVLHVHTTDNNVITNLYS 111


>sp|Q731R0|MTNB_BACC1 Methylthioribulose-1-phosphate dehydratase
           OS=Bacillus cereus (strain ATCC 10987) GN=mtnB PE=3 SV=1
          Length = 212

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
 Frame = +3

Query: 153 ILISTLKEPITPTDTL*KGQ-ILHTYIHNNPSAEC*VYF---TSGFLANLYS 296
           +L+  L  P+  T+     + ILHT+I+NN +A C ++     +  + NLYS
Sbjct: 60  LLVDHLGVPVLETELRPSAETILHTHIYNNTNAGCVLHVHTTDNNVITNLYS 111


>sp|Q81MJ0|MTNB_BACAN Methylthioribulose-1-phosphate dehydratase
           OS=Bacillus anthracis GN=mtnB PE=3 SV=1
          Length = 212

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
 Frame = +3

Query: 153 ILISTLKEPITPTDTL*KGQ-ILHTYIHNNPSAEC*VYF---TSGFLANLYS 296
           +L+  L  P+  T+     + ILHT+I+NN +A C ++     +  + NLYS
Sbjct: 60  LLVDHLGVPVLETELRPSAETILHTHIYNNTNAGCVLHVHTTDNNVITNLYS 111


>sp|A0RI44|MTNB_BACAH Methylthioribulose-1-phosphate dehydratase
           OS=Bacillus thuringiensis (strain Al Hakam) GN=mtnB PE=3
           SV=1
          Length = 212

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
 Frame = +3

Query: 153 ILISTLKEPITPTDTL*KGQ-ILHTYIHNNPSAEC*VYF---TSGFLANLYS 296
           +L+  L  P+  T+     + ILHT+I+NN +A C ++     +  + NLYS
Sbjct: 60  LLVDHLGVPVLETELRPSAETILHTHIYNNTNAGCVLHVHTTDNNVITNLYS 111
tr_hit_id A3I934
Definition tr|A3I934|A3I934_9BACI Alanine dehydrogenase OS=Bacillus sp. B14905
Align length 61
Score (bit) 34.3
E-value 3.2
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919355|Adiantum capillus-veneris mRNA, clone:
YMU001_000124_B04.
         (341 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A3I934|A3I934_9BACI Alanine dehydrogenase OS=Bacillus sp. B14...    34   3.2  
tr|Q4WBN5|Q4WBN5_ASPFU C6 transcription factor, putative OS=Aspe...    33   5.5  
tr|B0Y9B0|B0Y9B0_ASPFC C6 transcription factor, putative OS=Aspe...    33   5.5  
tr|B1HX25|B1HX25_LYSSC Alanine dehydrogenase OS=Lysinibacillus s...    33   9.3  
tr|B6KUP9|B6KUP9_TOXGO Putative uncharacterized protein OS=Toxop...    33   9.3  

>tr|A3I934|A3I934_9BACI Alanine dehydrogenase OS=Bacillus sp. B14905
           GN=BB14905_12380 PE=4 SV=1
          Length = 371

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
 Frame = +3

Query: 72  LGHSATKREKCPTSIRHISQSKESNYQILISTLKEPITPT-DTL*KGQILHTYIHNNPSA 248
           LG S T  +        +  +KE+  Q +I  +KEP+    D   +GQIL TY+H  P  
Sbjct: 41  LGSSFTDADYIAAGAHIVQTAKEAWSQEMIMKVKEPVASEYDYFYEGQILFTYLHLAPEV 100

Query: 249 E 251
           E
Sbjct: 101 E 101


>tr|Q4WBN5|Q4WBN5_ASPFU C6 transcription factor, putative
           OS=Aspergillus fumigatus GN=AFUA_8G07360 PE=4 SV=2
          Length = 724

 Score = 33.5 bits (75), Expect = 5.5
 Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 4/89 (4%)
 Frame = +3

Query: 51  SRSSCNMLGHSATKREKCPTSIRHISQSKESNYQILISTLKEPITPTDTL*KGQIL---- 218
           S SS  ++GH  T REK     R  S++ E+ + ++ +      +P+ T+   Q+     
Sbjct: 201 SSSSAALIGHLQTTREKDRAGERLDSRAPEAGFSLISTLHNSSFSPSCTVGSAQLAPLQD 260

Query: 219 HTYIHNNPSAEC*VYFTSGFLANLYSILP 305
           H Y   +  A     F +G+  N++ I P
Sbjct: 261 HNYYFEHAHA-----FINGYFENIHFIHP 284


>tr|B0Y9B0|B0Y9B0_ASPFC C6 transcription factor, putative
           OS=Aspergillus fumigatus (strain CEA10 / CBS 144.89 /
           FGSC A1163) GN=AFUB_080380 PE=4 SV=1
          Length = 724

 Score = 33.5 bits (75), Expect = 5.5
 Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 4/89 (4%)
 Frame = +3

Query: 51  SRSSCNMLGHSATKREKCPTSIRHISQSKESNYQILISTLKEPITPTDTL*KGQIL---- 218
           S SS  ++GH  T REK     R  S++ E+ + ++ +      +P+ T+   Q+     
Sbjct: 201 SSSSAALIGHLQTTREKDRAGERLDSRAPEAGFSLISTLHNSSFSPSCTVGSAQLAPLQD 260

Query: 219 HTYIHNNPSAEC*VYFTSGFLANLYSILP 305
           H Y   +  A     F +G+  N++ I P
Sbjct: 261 HNYYFEHAHA-----FINGYFENIHFIHP 284


>tr|B1HX25|B1HX25_LYSSC Alanine dehydrogenase OS=Lysinibacillus
           sphaericus (strain C3-41) GN=Bsph_4140 PE=4 SV=1
          Length = 339

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
 Frame = +3

Query: 72  LGHSATKREKCPTSIRHISQSKESNYQILISTLKEPITPT-DTL*KGQILHTYIHNNPSA 248
           LG S T  +        ++ +KE+  Q +I  +KEP+    +   +GQIL TY+H  P  
Sbjct: 9   LGSSFTDADYIAAGAHIVNTAKEAWSQEMIMKVKEPVASEYNYFYEGQILFTYLHLAPEV 68

Query: 249 E 251
           E
Sbjct: 69  E 69


>tr|B6KUP9|B6KUP9_TOXGO Putative uncharacterized protein
           OS=Toxoplasma gondii ME49 GN=TGME49_020480 PE=4 SV=1
          Length = 841

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 14/36 (38%), Positives = 23/36 (63%)
 Frame = +1

Query: 34  EEKTRIVDQAATCLDIALLREKNAPRLSGISRSPRK 141
           EE+TR++D  A+ L  A L +  APR + +S +P +
Sbjct: 224 EEETRLLDMLASALSTAELHQSQAPRRAPVSEAPAR 259