BP919363
Clone id YMU001_000124_C03
Library
Length 424
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000124_C03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
AGACAATTTGCGATAATTGTTGTTATGATGCAAATACGAACGTGGTTCGTATCAGAAAGA
AGCTATCGAAAATTTGTTGAGATGATGGCTACACCGCCAAGTGACAACAGCATGAGGGCA
TTCTTCGTGAATGGCACTTTGATGAAGGGTTTACAGAAGGCAGAAAAGCAGTAACACTTA
GTATATACATGGCTAGACTGCCATGGATTGTTTGGCATGCACAGCACTTGCGCAGAGTCA
CATGTTGCATGCCGTGCGGTTGTTGAGATTAGTCTGCATGGACATCATCGCGAAACCAGG
CCTTTGTTTTGTCGAGAAGAGGGGAAGAAGAGGAAACACTGGCAAAGAGGTCGCCTTCGG
GCGCCCAGATGCCAGTTTCCGGATGTGGGGCCCACCAGGTGGTCGTCTTTGTCAGACTCT
TCAT
■■Homology search results ■■ -
sp_hit_id Q8IX90
Definition sp|Q8IX90|CM003_HUMAN Uncharacterized protein C13orf3 OS=Homo sapiens
Align length 52
Score (bit) 31.6
E-value 1.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919363|Adiantum capillus-veneris mRNA, clone:
YMU001_000124_C03.
(424 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q8IX90|CM003_HUMAN Uncharacterized protein C13orf3 OS=Homo sa... 32 1.3
sp|Q9FLN4|RK27_ARATH 50S ribosomal protein L27, chloroplastic OS... 30 3.0
sp|Q3A825|NUOCD_PELCD NADH-quinone oxidoreductase subunit C/D OS... 30 3.0
sp|P14679|TYRO_HUMAN Tyrosinase OS=Homo sapiens GN=TYR PE=1 SV=3 30 5.0
sp|Q9BDE0|TYRO_GORGO Tyrosinase OS=Gorilla gorilla gorilla GN=TY... 30 5.0
sp|P30155|RK27_TOBAC 50S ribosomal protein L27, chloroplastic OS... 30 5.2
sp|P55026|TYRO_TRISI Tyrosinase (Fragment) OS=Trionyx sinensis G... 29 8.6
sp|P24188|YCEA_ECOLI UPF0176 protein yceA OS=Escherichia coli (s... 29 8.8

>sp|Q8IX90|CM003_HUMAN Uncharacterized protein C13orf3 OS=Homo
sapiens GN=C13orf3 PE=1 SV=2
Length = 412

Score = 31.6 bits (70), Expect = 1.3
Identities = 19/52 (36%), Positives = 27/52 (51%)
Frame = -3

Query: 200 QSSHVYTKCYCFSAFCKPFIKVPFTKNALMLLSLGGVAIISTNFR*LLSDTN 45
+S YT FC P +K+P TKN+ +A++STN+ LS TN
Sbjct: 275 KSDAEYTNSPLVPTFCTPGLKIPSTKNS--------IALVSTNYP--LSKTN 316


>sp|Q9FLN4|RK27_ARATH 50S ribosomal protein L27, chloroplastic
OS=Arabidopsis thaliana GN=RPL27 PE=1 SV=1
Length = 198

Score = 30.4 bits (67), Expect = 3.0
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2

Query: 281 DIIAKPGLCFVEKRGRRGNTGKEVAFGRPDASFRM 385
D +AKPG V +RG + + GK V G+ F +
Sbjct: 85 DQVAKPGAIIVRQRGTKFHAGKNVGIGKDHTIFSL 119


>sp|Q3A825|NUOCD_PELCD NADH-quinone oxidoreductase subunit C/D
OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1)
GN=nuoC PE=3 SV=1
Length = 794

Score = 30.4 bits (67), Expect = 3.0
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = -1

Query: 385 HPETGIWAPEGDLFASVSSSSPLLDKTKAWFRDDVHAD 272
H G+W P A +S++PLL++ + F DDV +
Sbjct: 206 HRAAGMWGPPQPKIAFSASTAPLLEQLRERFGDDVRQE 243


>sp|P14679|TYRO_HUMAN Tyrosinase OS=Homo sapiens GN=TYR PE=1 SV=3
Length = 529

Score = 29.6 bits (65), Expect = 5.0
Identities = 16/55 (29%), Positives = 24/55 (43%)
Frame = +3

Query: 219 AQHLRRVTCCMPCGC*D*SAWTSSRNQAFVLSRRGEEEETLAKRSPSGAQMPVSG 383
+++L CC P W+ R+ LS RG + L +P G Q P +G
Sbjct: 27 SKNLMEKECCPP--------WSGDRSPCGQLSGRGSCQNILLSNAPLGPQFPFTG 73


>sp|Q9BDE0|TYRO_GORGO Tyrosinase OS=Gorilla gorilla gorilla GN=TYR
PE=3 SV=2
Length = 529

Score = 29.6 bits (65), Expect = 5.0
Identities = 16/55 (29%), Positives = 24/55 (43%)
Frame = +3

Query: 219 AQHLRRVTCCMPCGC*D*SAWTSSRNQAFVLSRRGEEEETLAKRSPSGAQMPVSG 383
+++L CC P W+ R+ LS RG + L +P G Q P +G
Sbjct: 27 SKNLMEKECCPP--------WSGDRSPCGQLSGRGSCQNILLSNAPLGPQFPFTG 73


>sp|P30155|RK27_TOBAC 50S ribosomal protein L27, chloroplastic
OS=Nicotiana tabacum GN=RPL27 PE=1 SV=1
Length = 179

Score = 29.6 bits (65), Expect = 5.2
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2

Query: 281 DIIAKPGLCFVEKRGRRGNTGKEVAFGRPDASFRM 385
D +AKPG V +RG + + GK V G+ F +
Sbjct: 78 DQVAKPGSIIVRQRGTKFHPGKNVGLGKDHTIFSL 112


>sp|P55026|TYRO_TRISI Tyrosinase (Fragment) OS=Trionyx sinensis
GN=TYR PE=3 SV=1
Length = 273

Score = 28.9 bits (63), Expect = 8.6
Identities = 17/55 (30%), Positives = 23/55 (41%)
Frame = +3

Query: 219 AQHLRRVTCCMPCGC*D*SAWTSSRNQAFVLSRRGEEEETLAKRSPSGAQMPVSG 383
++ L R CC W + LS RG +E L R+P G Q P +G
Sbjct: 27 SESLLRKECC--------PLWAGDGSPCGELSGRGSCQEILLSRAPLGPQFPFTG 73


>sp|P24188|YCEA_ECOLI UPF0176 protein yceA OS=Escherichia coli
(strain K12) GN=yceA PE=2 SV=2
Length = 350

Score = 28.9 bits (63), Expect = 8.8
Identities = 22/64 (34%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
Frame = +1

Query: 199 CHGLFGMHSTCAESHVACRAVV--EISLHGHHRETRPLFCREEGKKRKHWQRGRLRAPRC 372
CH LF CAE + C + + E S + R RE G K + RGRL C
Sbjct: 285 CHLLFIQCPVCAEKYKGCCSEICCEESALPPEEQRRRRAGRENGNKIFNKSRGRLNTTLC 344

Query: 373 QFPD 384
PD
Sbjct: 345 -IPD 347


tr_hit_id A9NLF9
Definition tr|A9NLF9|A9NLF9_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 47
Score (bit) 37.4
E-value 0.37
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919363|Adiantum capillus-veneris mRNA, clone:
YMU001_000124_C03.
(424 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9NLF9|A9NLF9_PICSI Putative uncharacterized protein OS=Picea... 37 0.37
tr|A9P9U6|A9P9U6_POPTR Putative uncharacterized protein OS=Popul... 35 1.4
tr|A9SBR0|A9SBR0_PHYPA Predicted protein OS=Physcomitrella paten... 35 1.8
tr|A7T461|A7T461_NEMVE Predicted protein OS=Nematostella vectens... 33 5.4
tr|A4FAA2|A4FAA2_SACEN Secreted alpha-amylase OS=Saccharopolyspo... 33 9.1
tr|Q4E4T9|Q4E4T9_TRYCR Protein kinase, putative OS=Trypanosoma c... 33 9.1
tr|A4RNY1|A4RNY1_MAGGR Putative uncharacterized protein OS=Magna... 33 9.1

>tr|A9NLF9|A9NLF9_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=4 SV=1
Length = 113

Score = 37.4 bits (85), Expect = 0.37
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 7/47 (14%)
Frame = -1

Query: 409 KTTTWWAPHPETGIWAPE-------GDLFASVSSSSPLLDKTKAWFR 290
K+ WW PHP+TG++ P GD S +S + + +AWFR
Sbjct: 56 KSEKWWLPHPKTGVFGPAEEQGWAGGDRHHSRENSDESVLEQQAWFR 102


>tr|A9P9U6|A9P9U6_POPTR Putative uncharacterized protein OS=Populus
trichocarpa PE=2 SV=1
Length = 127

Score = 35.4 bits (80), Expect = 1.4
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 10/63 (15%)
Frame = -1

Query: 412 TKTTTWWAPHPETGIWAPEGDLFASVSS----------SSPLLDKTKAWFRDDVHAD*SQ 263
T++ +WAPHP TG++ P + S S P+L++ KAWFR D +
Sbjct: 64 TQSDKYWAPHPRTGVFGPATEQHLSEISGDSASVGDGGQDPVLEE-KAWFRPTSLED-LE 121

Query: 262 QPH 254
+PH
Sbjct: 122 KPH 124


>tr|A9SBR0|A9SBR0_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_77207 PE=4 SV=1
Length = 294

Score = 35.0 bits (79), Expect = 1.8
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -1

Query: 412 TKTTTWWAPHPETGIWAPEG 353
TK WW P P TG W PEG
Sbjct: 225 TKQVKWWRPDPVTGAWVPEG 244


>tr|A7T461|A7T461_NEMVE Predicted protein OS=Nematostella vectensis
GN=v1g222072 PE=4 SV=1
Length = 291

Score = 33.5 bits (75), Expect = 5.4
Identities = 20/42 (47%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
Frame = +3

Query: 123 LREWHFDEGFTEGRKAVTLS---IYMARLPWIVWHAQHLRRV 239
LREWH D+GFTE R AV LS ++ A LP +V + + R+
Sbjct: 104 LREWH-DQGFTELRMAVNLSTVQLHHAELPRVVNNLMQVYRL 144


>tr|A4FAA2|A4FAA2_SACEN Secreted alpha-amylase OS=Saccharopolyspora
erythraea (strain NRRL 23338) GN=amlB PE=3 SV=1
Length = 488

Score = 32.7 bits (73), Expect = 9.1
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +2

Query: 335 NTGKEVAFGRPDASFRMWGPPGGRLCQT 418
N G ++AFGR DA F ++ GG+L QT
Sbjct: 406 NGGGQIAFGRGDAGFAVFNTEGGQLSQT 433


>tr|Q4E4T9|Q4E4T9_TRYCR Protein kinase, putative OS=Trypanosoma
cruzi GN=Tc00.1047053508461.230 PE=4 SV=1
Length = 1078

Score = 32.7 bits (73), Expect = 9.1
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = +1

Query: 193 LDCHGLFGMHSTCAESHVACRAVVE--ISLHGHHRE 294
+DCH ++ TCAE C A+ E ++L GHHR+
Sbjct: 723 VDCHRVYSKQCTCAE----CGAIYENSVALRGHHRK 754


>tr|A4RNY1|A4RNY1_MAGGR Putative uncharacterized protein
OS=Magnaporthe grisea GN=MGG_05368 PE=4 SV=1
Length = 1481

Score = 32.7 bits (73), Expect = 9.1
Identities = 26/75 (34%), Positives = 30/75 (40%), Gaps = 4/75 (5%)
Frame = +1

Query: 181 VYTWLDCHGLFGMHSTCAESHVACRAVVEISLHGHHRETRPLFCREEGKKRKH----WQR 348
VYTWL GL H A AC + SLH RE P E + R H +
Sbjct: 376 VYTWLRSRGLARTHEDIAG---ACLIYIFASLHA--REPAPSIEETESRMRNHPFLAYAT 430

Query: 349 GRLRAPRCQFPDVGP 393
RA F D+GP
Sbjct: 431 QHWRAHVQHFMDIGP 445