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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP919363
Clone id YMU001_000124_C03
Library
Length 424
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000124_C03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
AGACAATTTGCGATAATTGTTGTTATGATGCAAATACGAACGTGGTTCGTATCAGAAAGA
AGCTATCGAAAATTTGTTGAGATGATGGCTACACCGCCAAGTGACAACAGCATGAGGGCA
TTCTTCGTGAATGGCACTTTGATGAAGGGTTTACAGAAGGCAGAAAAGCAGTAACACTTA
GTATATACATGGCTAGACTGCCATGGATTGTTTGGCATGCACAGCACTTGCGCAGAGTCA
CATGTTGCATGCCGTGCGGTTGTTGAGATTAGTCTGCATGGACATCATCGCGAAACCAGG
CCTTTGTTTTGTCGAGAAGAGGGGAAGAAGAGGAAACACTGGCAAAGAGGTCGCCTTCGG
GCGCCCAGATGCCAGTTTCCGGATGTGGGGCCCACCAGGTGGTCGTCTTTGTCAGACTCT
TCAT
■■Homology search results ■■ -
sp_hit_id Q8IX90
Definition sp|Q8IX90|CM003_HUMAN Uncharacterized protein C13orf3 OS=Homo sapiens
Align length 52
Score (bit) 31.6
E-value 1.3
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919363|Adiantum capillus-veneris mRNA, clone:
YMU001_000124_C03.
         (424 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8IX90|CM003_HUMAN Uncharacterized protein C13orf3 OS=Homo sa...    32   1.3  
sp|Q9FLN4|RK27_ARATH 50S ribosomal protein L27, chloroplastic OS...    30   3.0  
sp|Q3A825|NUOCD_PELCD NADH-quinone oxidoreductase subunit C/D OS...    30   3.0  
sp|P14679|TYRO_HUMAN Tyrosinase OS=Homo sapiens GN=TYR PE=1 SV=3       30   5.0  
sp|Q9BDE0|TYRO_GORGO Tyrosinase OS=Gorilla gorilla gorilla GN=TY...    30   5.0  
sp|P30155|RK27_TOBAC 50S ribosomal protein L27, chloroplastic OS...    30   5.2  
sp|P55026|TYRO_TRISI Tyrosinase (Fragment) OS=Trionyx sinensis G...    29   8.6  
sp|P24188|YCEA_ECOLI UPF0176 protein yceA OS=Escherichia coli (s...    29   8.8  

>sp|Q8IX90|CM003_HUMAN Uncharacterized protein C13orf3 OS=Homo
           sapiens GN=C13orf3 PE=1 SV=2
          Length = 412

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 19/52 (36%), Positives = 27/52 (51%)
 Frame = -3

Query: 200 QSSHVYTKCYCFSAFCKPFIKVPFTKNALMLLSLGGVAIISTNFR*LLSDTN 45
           +S   YT       FC P +K+P TKN+        +A++STN+   LS TN
Sbjct: 275 KSDAEYTNSPLVPTFCTPGLKIPSTKNS--------IALVSTNYP--LSKTN 316


>sp|Q9FLN4|RK27_ARATH 50S ribosomal protein L27, chloroplastic
           OS=Arabidopsis thaliana GN=RPL27 PE=1 SV=1
          Length = 198

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +2

Query: 281 DIIAKPGLCFVEKRGRRGNTGKEVAFGRPDASFRM 385
           D +AKPG   V +RG + + GK V  G+    F +
Sbjct: 85  DQVAKPGAIIVRQRGTKFHAGKNVGIGKDHTIFSL 119


>sp|Q3A825|NUOCD_PELCD NADH-quinone oxidoreductase subunit C/D
           OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1)
           GN=nuoC PE=3 SV=1
          Length = 794

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = -1

Query: 385 HPETGIWAPEGDLFASVSSSSPLLDKTKAWFRDDVHAD 272
           H   G+W P     A  +S++PLL++ +  F DDV  +
Sbjct: 206 HRAAGMWGPPQPKIAFSASTAPLLEQLRERFGDDVRQE 243


>sp|P14679|TYRO_HUMAN Tyrosinase OS=Homo sapiens GN=TYR PE=1 SV=3
          Length = 529

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 16/55 (29%), Positives = 24/55 (43%)
 Frame = +3

Query: 219 AQHLRRVTCCMPCGC*D*SAWTSSRNQAFVLSRRGEEEETLAKRSPSGAQMPVSG 383
           +++L    CC P        W+  R+    LS RG  +  L   +P G Q P +G
Sbjct: 27  SKNLMEKECCPP--------WSGDRSPCGQLSGRGSCQNILLSNAPLGPQFPFTG 73


>sp|Q9BDE0|TYRO_GORGO Tyrosinase OS=Gorilla gorilla gorilla GN=TYR
           PE=3 SV=2
          Length = 529

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 16/55 (29%), Positives = 24/55 (43%)
 Frame = +3

Query: 219 AQHLRRVTCCMPCGC*D*SAWTSSRNQAFVLSRRGEEEETLAKRSPSGAQMPVSG 383
           +++L    CC P        W+  R+    LS RG  +  L   +P G Q P +G
Sbjct: 27  SKNLMEKECCPP--------WSGDRSPCGQLSGRGSCQNILLSNAPLGPQFPFTG 73


>sp|P30155|RK27_TOBAC 50S ribosomal protein L27, chloroplastic
           OS=Nicotiana tabacum GN=RPL27 PE=1 SV=1
          Length = 179

 Score = 29.6 bits (65), Expect = 5.2
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +2

Query: 281 DIIAKPGLCFVEKRGRRGNTGKEVAFGRPDASFRM 385
           D +AKPG   V +RG + + GK V  G+    F +
Sbjct: 78  DQVAKPGSIIVRQRGTKFHPGKNVGLGKDHTIFSL 112


>sp|P55026|TYRO_TRISI Tyrosinase (Fragment) OS=Trionyx sinensis
           GN=TYR PE=3 SV=1
          Length = 273

 Score = 28.9 bits (63), Expect = 8.6
 Identities = 17/55 (30%), Positives = 23/55 (41%)
 Frame = +3

Query: 219 AQHLRRVTCCMPCGC*D*SAWTSSRNQAFVLSRRGEEEETLAKRSPSGAQMPVSG 383
           ++ L R  CC          W    +    LS RG  +E L  R+P G Q P +G
Sbjct: 27  SESLLRKECC--------PLWAGDGSPCGELSGRGSCQEILLSRAPLGPQFPFTG 73


>sp|P24188|YCEA_ECOLI UPF0176 protein yceA OS=Escherichia coli
           (strain K12) GN=yceA PE=2 SV=2
          Length = 350

 Score = 28.9 bits (63), Expect = 8.8
 Identities = 22/64 (34%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
 Frame = +1

Query: 199 CHGLFGMHSTCAESHVACRAVV--EISLHGHHRETRPLFCREEGKKRKHWQRGRLRAPRC 372
           CH LF     CAE +  C + +  E S      + R    RE G K  +  RGRL    C
Sbjct: 285 CHLLFIQCPVCAEKYKGCCSEICCEESALPPEEQRRRRAGRENGNKIFNKSRGRLNTTLC 344

Query: 373 QFPD 384
             PD
Sbjct: 345 -IPD 347
tr_hit_id A9NLF9
Definition tr|A9NLF9|A9NLF9_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 47
Score (bit) 37.4
E-value 0.37
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919363|Adiantum capillus-veneris mRNA, clone:
YMU001_000124_C03.
         (424 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9NLF9|A9NLF9_PICSI Putative uncharacterized protein OS=Picea...    37   0.37 
tr|A9P9U6|A9P9U6_POPTR Putative uncharacterized protein OS=Popul...    35   1.4  
tr|A9SBR0|A9SBR0_PHYPA Predicted protein OS=Physcomitrella paten...    35   1.8  
tr|A7T461|A7T461_NEMVE Predicted protein OS=Nematostella vectens...    33   5.4  
tr|A4FAA2|A4FAA2_SACEN Secreted alpha-amylase OS=Saccharopolyspo...    33   9.1  
tr|Q4E4T9|Q4E4T9_TRYCR Protein kinase, putative OS=Trypanosoma c...    33   9.1  
tr|A4RNY1|A4RNY1_MAGGR Putative uncharacterized protein OS=Magna...    33   9.1  

>tr|A9NLF9|A9NLF9_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=4 SV=1
          Length = 113

 Score = 37.4 bits (85), Expect = 0.37
 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 7/47 (14%)
 Frame = -1

Query: 409 KTTTWWAPHPETGIWAPE-------GDLFASVSSSSPLLDKTKAWFR 290
           K+  WW PHP+TG++ P        GD   S  +S   + + +AWFR
Sbjct: 56  KSEKWWLPHPKTGVFGPAEEQGWAGGDRHHSRENSDESVLEQQAWFR 102


>tr|A9P9U6|A9P9U6_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 127

 Score = 35.4 bits (80), Expect = 1.4
 Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 10/63 (15%)
 Frame = -1

Query: 412 TKTTTWWAPHPETGIWAPEGDLFASVSS----------SSPLLDKTKAWFRDDVHAD*SQ 263
           T++  +WAPHP TG++ P  +   S  S            P+L++ KAWFR     D  +
Sbjct: 64  TQSDKYWAPHPRTGVFGPATEQHLSEISGDSASVGDGGQDPVLEE-KAWFRPTSLED-LE 121

Query: 262 QPH 254
           +PH
Sbjct: 122 KPH 124


>tr|A9SBR0|A9SBR0_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_77207 PE=4 SV=1
          Length = 294

 Score = 35.0 bits (79), Expect = 1.8
 Identities = 12/20 (60%), Positives = 12/20 (60%)
 Frame = -1

Query: 412 TKTTTWWAPHPETGIWAPEG 353
           TK   WW P P TG W PEG
Sbjct: 225 TKQVKWWRPDPVTGAWVPEG 244


>tr|A7T461|A7T461_NEMVE Predicted protein OS=Nematostella vectensis
           GN=v1g222072 PE=4 SV=1
          Length = 291

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 20/42 (47%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
 Frame = +3

Query: 123 LREWHFDEGFTEGRKAVTLS---IYMARLPWIVWHAQHLRRV 239
           LREWH D+GFTE R AV LS   ++ A LP +V +   + R+
Sbjct: 104 LREWH-DQGFTELRMAVNLSTVQLHHAELPRVVNNLMQVYRL 144


>tr|A4FAA2|A4FAA2_SACEN Secreted alpha-amylase OS=Saccharopolyspora
           erythraea (strain NRRL 23338) GN=amlB PE=3 SV=1
          Length = 488

 Score = 32.7 bits (73), Expect = 9.1
 Identities = 14/28 (50%), Positives = 19/28 (67%)
 Frame = +2

Query: 335 NTGKEVAFGRPDASFRMWGPPGGRLCQT 418
           N G ++AFGR DA F ++   GG+L QT
Sbjct: 406 NGGGQIAFGRGDAGFAVFNTEGGQLSQT 433


>tr|Q4E4T9|Q4E4T9_TRYCR Protein kinase, putative OS=Trypanosoma
           cruzi GN=Tc00.1047053508461.230 PE=4 SV=1
          Length = 1078

 Score = 32.7 bits (73), Expect = 9.1
 Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
 Frame = +1

Query: 193 LDCHGLFGMHSTCAESHVACRAVVE--ISLHGHHRE 294
           +DCH ++    TCAE    C A+ E  ++L GHHR+
Sbjct: 723 VDCHRVYSKQCTCAE----CGAIYENSVALRGHHRK 754


>tr|A4RNY1|A4RNY1_MAGGR Putative uncharacterized protein
           OS=Magnaporthe grisea GN=MGG_05368 PE=4 SV=1
          Length = 1481

 Score = 32.7 bits (73), Expect = 9.1
 Identities = 26/75 (34%), Positives = 30/75 (40%), Gaps = 4/75 (5%)
 Frame = +1

Query: 181 VYTWLDCHGLFGMHSTCAESHVACRAVVEISLHGHHRETRPLFCREEGKKRKH----WQR 348
           VYTWL   GL   H   A    AC   +  SLH   RE  P     E + R H    +  
Sbjct: 376 VYTWLRSRGLARTHEDIAG---ACLIYIFASLHA--REPAPSIEETESRMRNHPFLAYAT 430

Query: 349 GRLRAPRCQFPDVGP 393
              RA    F D+GP
Sbjct: 431 QHWRAHVQHFMDIGP 445