BP919365
Clone id YMU001_000124_C05
Library
Length 478
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000124_C05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
TTTTTTTTTTTTTTTCTCCAGCTGAATTCTATGCAATTAATGGTAGCAATTTGCAACACA
AGCTTTGTTACGGGTTTGCCTCACTCGGCTTGTAATGACAGAGATTCCAGTAATCCACTT
TGTAAAAGTTCAAGGCTTTCGTTCTGCACTAACCATTTTAAAACCCTCAATATATACACT
TTGGATCCAATTTCCAGTAAAATATCAGACTTCTTGGACATGGCAAAAGACAAATTTTGA
CTACTGCACCAGAATGAAGTAAATGCCTCAGCAATTACTCATTTTACACACGGCAGGTGG
TTTACACCTTGTTCATAAGTTTCAAATCAACACCTTCATCCAATCCTTTAGAGCCCAATA
ACACATTTGCATCCAATTGTTTATCGAATTTCCTCCGCCGCCTTCCCTCATACTCATCAA
AGCTTTCCATCAGCTGCAACTGCTCAGCAGTGATGGGGTTTCCGTGAACAGAGAGACT
■■Homology search results ■■ -
sp_hit_id P0C895
Definition sp|P0C895|Y2010_ARATH LRR repeats and ubiquitin-like domain-containing protein At2g30105 OS=Arabidopsis thaliana
Align length 51
Score (bit) 44.7
E-value 0.0002
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919365|Adiantum capillus-veneris mRNA, clone:
YMU001_000124_C05.
(463 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P0C895|Y2010_ARATH LRR repeats and ubiquitin-like domain-cont... 45 2e-04
sp|O74791|GRN1_SCHPO GTPase grn1 OS=Schizosaccharomyces pombe GN... 33 0.59
sp|Q8QL20|Y356_SIRV1 Uncharacterized protein 356 OS=Sulfolobus i... 32 1.0

>sp|P0C895|Y2010_ARATH LRR repeats and ubiquitin-like
domain-containing protein At2g30105 OS=Arabidopsis
thaliana GN=At2g30105 PE=2 SV=1
Length = 374

Score = 44.7 bits (104), Expect = 2e-04
Identities = 23/51 (45%), Positives = 31/51 (60%)
Frame = -1

Query: 463 SLSVHGNPITAEQLQLMESFDEYEGRRRRKFDKQLDANVLLGSKGLDEGVD 311
+L +H IT E L+ E +D+++ RRR K KQLD V +GS DEG D
Sbjct: 322 TLGLHNTEITVEFLRQFEGYDDFDERRRTKHQKQLDFRV-VGSGQFDEGAD 371


>sp|O74791|GRN1_SCHPO GTPase grn1 OS=Schizosaccharomyces pombe
GN=grn1 PE=1 SV=1
Length = 470

Score = 33.1 bits (74), Expect = 0.59
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = +3

Query: 243 SKCLSNYSFYTRQVVYTLFISFKSTPSSNPLEPNNTFASNCLSNFLRRLPSYSSKLSISC 422
S+ L+ + Y R T+ + S ++ L+ + AS+ +SN L+ L SYS+K +
Sbjct: 209 SEVLNKWVTYLRNFFPTIPMRSASGSGNSNLKHQSASASSTISNLLKSLKSYSAKKKLKS 268

Query: 423 NCS-AVMGFP 449
+ + V+G+P
Sbjct: 269 SLTVGVIGYP 278


>sp|Q8QL20|Y356_SIRV1 Uncharacterized protein 356 OS=Sulfolobus
islandicus rod-shaped virus 1 GN=356 PE=4 SV=1
Length = 356

Score = 32.3 bits (72), Expect = 1.0
Identities = 12/46 (26%), Positives = 26/46 (56%)
Frame = +2

Query: 32 QFATQALLRVCLTRLVMTEIPVIHFVKVQGFRSALTILKPSIYTLW 169
+F Q +++ + ++ EIP + F + FR ++I+ P Y++W
Sbjct: 18 KFVAQEHVKMLREKYIVYEIPTLSFYQFTPFRYPISIIHPLFYSMW 63


tr_hit_id B6T176
Definition tr|B6T176|B6T176_MAIZE LAP4 protein OS=Zea mays
Align length 51
Score (bit) 72.8
E-value 8.0e-12
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919365|Adiantum capillus-veneris mRNA, clone:
YMU001_000124_C05.
(463 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B6T176|B6T176_MAIZE LAP4 protein OS=Zea mays PE=2 SV=1 73 8e-12
tr|Q8RWI2|Q8RWI2_ARATH Putative uncharacterized protein At5g0791... 72 1e-11
tr|Q10Q27|Q10Q27_ORYSJ Leucine Rich Repeat family protein, expre... 70 4e-11
tr|Q0DU21|Q0DU21_ORYSJ Os03g0212200 protein OS=Oryza sativa subs... 70 4e-11
tr|B8AQV9|B8AQV9_ORYSI Putative uncharacterized protein OS=Oryza... 70 4e-11
tr|Q9SD93|Q9SD93_ARATH Putative uncharacterized protein F13G24.1... 68 2e-10
tr|A9TS86|A9TS86_PHYPA Predicted protein OS=Physcomitrella paten... 67 3e-10
tr|A3AFE7|A3AFE7_ORYSJ Putative uncharacterized protein OS=Oryza... 59 1e-07
tr|A8IJL5|A8IJL5_CHLRE Predicted protein OS=Chlamydomonas reinha... 57 3e-07
tr|A4S408|A4S408_OSTLU Predicted protein (Fragment) OS=Ostreococ... 51 2e-05
tr|A9SSM9|A9SSM9_PHYPA Predicted protein OS=Physcomitrella paten... 50 4e-05
tr|B6T4S8|B6T4S8_MAIZE Small GTP-binding protein domain OS=Zea m... 44 0.003
tr|Q00ZP2|Q00ZP2_OSTTA Putative leucine-rich repeat protein [Ory... 44 0.004
tr|A9PGU0|A9PGU0_POPTR Putative uncharacterized protein OS=Popul... 42 0.015
tr|A7NYA9|A7NYA9_VITVI Chromosome chr6 scaffold_3, whole genome ... 41 0.034
tr|A5B0K2|A5B0K2_VITVI Putative uncharacterized protein OS=Vitis... 41 0.034
tr|Q7XDQ7|Q7XDQ7_ORYSJ Os10g0456200 protein OS=Oryza sativa subs... 40 0.057
tr|B8BH88|B8BH88_ORYSI Putative uncharacterized protein OS=Oryza... 40 0.057
tr|A3C5E3|A3C5E3_ORYSJ Putative uncharacterized protein OS=Oryza... 40 0.057
tr|A8IS91|A8IS91_CHLRE Ubiquitin family protein OS=Chlamydomonas... 39 0.13
tr|A4RZS2|A4RZS2_OSTLU Predicted protein OS=Ostreococcus lucimar... 38 0.22
tr|Q8V9M5|Q8V9M5_9VIRU Putative uncharacterized protein OS=Sulfo... 33 5.4
tr|Q492Q5|Q492Q5_BLOPB 4-amino-4-deoxychorismate lyase OS=Blochm... 33 7.0
tr|B0X6X4|B0X6X4_CULQU Tenascin OS=Culex quinquefasciatus GN=Cpi... 33 7.0

>tr|B6T176|B6T176_MAIZE LAP4 protein OS=Zea mays PE=2 SV=1
Length = 262

Score = 72.8 bits (177), Expect = 8e-12
Identities = 32/51 (62%), Positives = 41/51 (80%)
Frame = -1

Query: 463 SLSVHGNPITAEQLQLMESFDEYEGRRRRKFDKQLDANVLLGSKGLDEGVD 311
SLS+H NPIT +Q Q M+ F E+E RRR+KFDKQ+D+ V++GS LDEGVD
Sbjct: 210 SLSLHDNPITMDQFQQMDGFGEFEARRRKKFDKQIDSGVMMGSTALDEGVD 260


>tr|Q8RWI2|Q8RWI2_ARATH Putative uncharacterized protein At5g07910
OS=Arabidopsis thaliana GN=At5g07910 PE=2 SV=1
Length = 262

Score = 72.0 bits (175), Expect = 1e-11
Identities = 30/51 (58%), Positives = 43/51 (84%)
Frame = -1

Query: 463 SLSVHGNPITAEQLQLMESFDEYEGRRRRKFDKQLDANVLLGSKGLDEGVD 311
+LS+H NPI+ +Q QLME + ++E RR++KFDKQ+D+NV++GSK LD GVD
Sbjct: 211 NLSLHNNPISMDQFQLMEGYQDFEERRKKKFDKQIDSNVMMGSKALDVGVD 261


>tr|Q10Q27|Q10Q27_ORYSJ Leucine Rich Repeat family protein,
expressed OS=Oryza sativa subsp. japonica
GN=LOC_Os03g11360 PE=4 SV=1
Length = 266

Score = 70.5 bits (171), Expect = 4e-11
Identities = 29/52 (55%), Positives = 42/52 (80%)
Frame = -1

Query: 463 SLSVHGNPITAEQLQLMESFDEYEGRRRRKFDKQLDANVLLGSKGLDEGVDL 308
++S+H NPI+ +Q Q M+ F E+E RRR+KFDKQ+D+NV++ S LDEG+DL
Sbjct: 214 NISLHDNPISMDQFQQMDGFTEFEARRRKKFDKQIDSNVMMSSTALDEGIDL 265


>tr|Q0DU21|Q0DU21_ORYSJ Os03g0212200 protein OS=Oryza sativa subsp.
japonica GN=Os03g0212200 PE=4 SV=1
Length = 141

Score = 70.5 bits (171), Expect = 4e-11
Identities = 29/52 (55%), Positives = 42/52 (80%)
Frame = -1

Query: 463 SLSVHGNPITAEQLQLMESFDEYEGRRRRKFDKQLDANVLLGSKGLDEGVDL 308
++S+H NPI+ +Q Q M+ F E+E RRR+KFDKQ+D+NV++ S LDEG+DL
Sbjct: 89 NISLHDNPISMDQFQQMDGFTEFEARRRKKFDKQIDSNVMMSSTALDEGIDL 140


>tr|B8AQV9|B8AQV9_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_10500 PE=4 SV=1
Length = 262

Score = 70.5 bits (171), Expect = 4e-11
Identities = 29/52 (55%), Positives = 42/52 (80%)
Frame = -1

Query: 463 SLSVHGNPITAEQLQLMESFDEYEGRRRRKFDKQLDANVLLGSKGLDEGVDL 308
++S+H NPI+ +Q Q M+ F E+E RRR+KFDKQ+D+NV++ S LDEG+DL
Sbjct: 210 NISLHDNPISMDQFQQMDGFTEFEARRRKKFDKQIDSNVMMSSTALDEGIDL 261


>tr|Q9SD93|Q9SD93_ARATH Putative uncharacterized protein F13G24.110
(Arabidopsis thaliana genomic DNA, chromosome 5, P1
clone:MXM12) OS=Arabidopsis thaliana GN=F13G24.110 PE=4
SV=1
Length = 268

Score = 68.2 bits (165), Expect = 2e-10
Identities = 28/49 (57%), Positives = 41/49 (83%)
Frame = -1

Query: 463 SLSVHGNPITAEQLQLMESFDEYEGRRRRKFDKQLDANVLLGSKGLDEG 317
+LS+H NPI+ +Q QLME + ++E RR++KFDKQ+D+NV++GSK LD G
Sbjct: 211 NLSLHNNPISMDQFQLMEGYQDFEERRKKKFDKQIDSNVMMGSKALDVG 259


>tr|A9TS86|A9TS86_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_149714 PE=4 SV=1
Length = 267

Score = 67.4 bits (163), Expect = 3e-10
Identities = 31/52 (59%), Positives = 40/52 (76%)
Frame = -1

Query: 463 SLSVHGNPITAEQLQLMESFDEYEGRRRRKFDKQLDANVLLGSKGLDEGVDL 308
+L +H I A+QL ME F+ YE RRRRK+DKQ+DANV+L S+G DEGVD+
Sbjct: 211 TLMLHDTLIPADQLHQMEGFEGYEQRRRRKYDKQIDANVILDSRGFDEGVDI 262


>tr|A3AFE7|A3AFE7_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_009519 PE=4 SV=1
Length = 233

Score = 58.9 bits (141), Expect = 1e-07
Identities = 28/52 (53%), Positives = 39/52 (75%)
Frame = -1

Query: 463 SLSVHGNPITAEQLQLMESFDEYEGRRRRKFDKQLDANVLLGSKGLDEGVDL 308
SLS++GN I + M+ F E+E RRR+KFDKQ+D+NV++ S LDEG+DL
Sbjct: 186 SLSLNGNKI-----RQMDGFTEFEARRRKKFDKQIDSNVMMSSTALDEGIDL 232


>tr|A8IJL5|A8IJL5_CHLRE Predicted protein OS=Chlamydomonas
reinhardtii GN=CHLREDRAFT_100208 PE=4 SV=1
Length = 265

Score = 57.4 bits (137), Expect = 3e-07
Identities = 26/51 (50%), Positives = 37/51 (72%)
Frame = -1

Query: 463 SLSVHGNPITAEQLQLMESFDEYEGRRRRKFDKQLDANVLLGSKGLDEGVD 311
+LS+HG PI ++LQ F E++ RR++K+DK L LLG++GLDEGVD
Sbjct: 206 TLSLHGCPIRPDELQETPGFKEFDERRKQKYDKVLAGGALLGARGLDEGVD 256


>tr|A4S408|A4S408_OSTLU Predicted protein (Fragment) OS=Ostreococcus
lucimarinus (strain CCE9901) GN=OSTLU_6692 PE=4 SV=1
Length = 252

Score = 51.2 bits (121), Expect = 2e-05
Identities = 23/50 (46%), Positives = 33/50 (66%)
Frame = -1

Query: 460 LSVHGNPITAEQLQLMESFDEYEGRRRRKFDKQLDANVLLGSKGLDEGVD 311
L++ NPI E L+ + + E+EGRR+R+ DK LD+ V+LG DEG D
Sbjct: 203 LNLRENPILVEALRERDGWSEFEGRRKRRADKALDSRVMLGDNVFDEGAD 252