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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP919379
Clone id YMU001_000124_D12
Library
Length 574
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000124_D12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
GCAGGTACTCAGAAAAGAAATTCTATGATGCAAAGGCTGGAGGTTGACCTTCTTTTTCTT
TGCAGCTCTTGGCAATACAGAACGTGCAGGAAGTCTTGAACTGCTTTTTCAAATTGGAGA
TAGAGGGGAGGGTGAGAGAGTGAAAGTTGAGCACACCGCAGTGATCGTGAAAGGGCTAGA
AGGTTTCCAGCACCTCAAGTCTGAGAGGATGAATGCGGCAAATATTCTTGAGAAGTTGAG
GATCCTCTCTGGGACTTGTGAGGATGTCTTCAAGGATGCTTCTGACAAGGAGAAGGATGC
CTTGCGGGAATTGATACCACTAGGATTTGACTCACAGAGATTTATGGAGGACAAGGATGA
TGTCATGCAAGTGGAATATGAATGAAGCCTTTTGGTATTCTGCCAATACTGAACTAAGGT
AGATCGAATGCTTTAGTCTATAAAATAGATTCATTTGGTACTTCGAGGACTGGTTCTTTT
GTCCTCGTGATCAAGTTTCGTCGAGTTTTCTGAAGCTTCCCCACCTTACTTTGATCGGCA
AGTTGTTGACTGATTTCTTTAAAAAGGTGGGTTG
■■Homology search results ■■ -
sp_hit_id A0JX88
Definition sp|A0JX88|SYA_ARTS2 Alanyl-tRNA synthetase OS=Arthrobacter sp. (strain FB24)
Align length 82
Score (bit) 36.2
E-value 0.12
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919379|Adiantum capillus-veneris mRNA, clone:
YMU001_000124_D12.
         (574 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|A0JX88|SYA_ARTS2 Alanyl-tRNA synthetase OS=Arthrobacter sp. (...    36   0.12 
sp|A1R709|SYA_ARTAT Alanyl-tRNA synthetase OS=Arthrobacter aures...    36   0.16 
sp|Q0ABN0|PROA_ALHEH Gamma-glutamyl phosphate reductase OS=Alkal...    32   3.0  
sp|Q5WM19|SYS_BACSK Seryl-tRNA synthetase OS=Bacillus clausii (s...    30   8.6  
sp|Q5VVW2|GARL3_HUMAN GTPase-activating Rap/Ran-GAP domain-like ...    30   8.6  
sp|Q9JIB3|BIR1G_MOUSE Baculoviral IAP repeat-containing protein ...    30   8.6  

>sp|A0JX88|SYA_ARTS2 Alanyl-tRNA synthetase OS=Arthrobacter sp.
           (strain FB24) GN=alaS PE=3 SV=1
          Length = 892

 Score = 36.2 bits (82), Expect = 0.12
 Identities = 27/82 (32%), Positives = 37/82 (45%)
 Frame = +2

Query: 68  LGNTERAGSLELLFQIGDRGEGERVKVEHTAVIVKGLEGFQHLKSERMNAANILEKLRIL 247
           + NT   GSL LL   GD+  G   +     V   G+E F+HL +ER     + E L++ 
Sbjct: 685 VANTSLIGSLSLL---GDQSVGSGNRRVEAFV---GMEAFRHLAAERALVTELTEMLKVP 738

Query: 248 SGTCEDVFKDASDKEKDALREL 313
           SG   D       K K   +EL
Sbjct: 739 SGLLADRIATTLTKLKTVEKEL 760


>sp|A1R709|SYA_ARTAT Alanyl-tRNA synthetase OS=Arthrobacter
           aurescens (strain TC1) GN=alaS PE=3 SV=2
          Length = 892

 Score = 35.8 bits (81), Expect = 0.16
 Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 6/87 (6%)
 Frame = +2

Query: 68  LGNTERAGSLELLFQIGDRGEGERVKVEHTAVIVKGLEGFQHLKSERMNAANILEKLRIL 247
           + NT   GSL LL +        RV+         GL+ F+HL +ER   + + E L++ 
Sbjct: 685 VSNTSLIGSLSLLGEQSVGSGNRRVEA------FVGLDAFRHLAAERALVSELTELLKVP 738

Query: 248 SGTCEDVFKD------ASDKEKDALRE 310
           SG   D          A++KE D LR+
Sbjct: 739 SGQLADRISSTLNKLKATEKELDRLRK 765


>sp|Q0ABN0|PROA_ALHEH Gamma-glutamyl phosphate reductase
           OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=proA
           PE=3 SV=1
          Length = 420

 Score = 31.6 bits (70), Expect = 3.0
 Identities = 24/103 (23%), Positives = 45/103 (43%), Gaps = 19/103 (18%)
 Frame = +2

Query: 62  AALGNTERAGS-LELLFQIGDRGEGERVKVEHTAVIVKGLEGFQHL-------------- 196
           AA+G   R    +++L   G +G  ER+  E T  ++K L+G  H+              
Sbjct: 189 AAVGELIRMDEYVDVLVPRGGKGLIERITAEATVPVIKHLDGICHVYIDDSADPAKAISV 248

Query: 197 ----KSERMNAANILEKLRILSGTCEDVFKDASDKEKDALREL 313
               K++R+   N +E L +     E V  + + + +++  EL
Sbjct: 249 AYNAKTQRLGTCNTMETLLVAEAIAERVLPELARRYRESEVEL 291


>sp|Q5WM19|SYS_BACSK Seryl-tRNA synthetase OS=Bacillus clausii
           (strain KSM-K16) GN=serS PE=3 SV=1
          Length = 424

 Score = 30.0 bits (66), Expect = 8.6
 Identities = 19/85 (22%), Positives = 36/85 (42%)
 Frame = +2

Query: 128 EGERVKVEHTAVIVKGLEGFQHLKSERMNAANILEKLRILSGTCEDVFKDASDKEKDALR 307
           EG + ++E     ++GLE F  L + R      +E+L+       +        +KDA  
Sbjct: 12  EGVKAQLERRNGTIEGLERFSQLDASRRTMIQEVEELKSKRNDVSEQIAALKRDKKDANS 71

Query: 308 ELIPLGFDSQRFMEDKDDVMQVEYE 382
            +  +   S+R  E  + +  +E E
Sbjct: 72  LIAEMKQVSERIKEQDEQLRSIETE 96


>sp|Q5VVW2|GARL3_HUMAN GTPase-activating Rap/Ran-GAP domain-like
           protein 3 OS=Homo sapiens GN=GARNL3 PE=1 SV=2
          Length = 1013

 Score = 30.0 bits (66), Expect = 8.6
 Identities = 19/50 (38%), Positives = 27/50 (54%)
 Frame = +2

Query: 92  SLELLFQIGDRGEGERVKVEHTAVIVKGLEGFQHLKSERMNAANILEKLR 241
           +L+LL    D+G+  R+ V   + + KGLEG Q  KS      N LEK +
Sbjct: 537 TLDLLVLRADKGKDARLFVFRLSALQKGLEGKQAGKSRSDCRENKLEKTK 586


>sp|Q9JIB3|BIR1G_MOUSE Baculoviral IAP repeat-containing protein 1g
           OS=Mus musculus GN=Naip7 PE=2 SV=1
          Length = 1402

 Score = 30.0 bits (66), Expect = 8.6
 Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 11/85 (12%)
 Frame = +2

Query: 149 EHTAVIVKGLEGFQHLKSERMNAANILEKLRILSGTCE-----------DVFKDASDKEK 295
           E  A  ++G EGF H+  E    + +  +L ++S  C            D+FKD   +  
Sbjct: 234 EEIAQYIQGYEGFVHVTGEHFVKSWVRRELPMVSAYCNDSVFANEELRMDMFKDWPQESP 293

Query: 296 DALRELIPLGFDSQRFMEDKDDVMQ 370
             +  L+  GF    F   K D+++
Sbjct: 294 VGVEALVRAGF----FYTGKKDIVR 314
tr_hit_id Q3XZI9
Definition tr|Q3XZI9|Q3XZI9_ENTFC Glyoxalase/bleomycin resistance protein/dioxygenase OS=Enterococcus faecium DO
Align length 102
Score (bit) 37.0
E-value 0.77
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919379|Adiantum capillus-veneris mRNA, clone:
YMU001_000124_D12.
         (574 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q3XZI9|Q3XZI9_ENTFC Glyoxalase/bleomycin resistance protein/d...    37   0.77 
tr|B8PL84|B8PL84_9APHY Predicted protein OS=Postia placenta Mad-...    37   1.0  
tr|A6CIV8|A6CIV8_9BACI Putative uncharacterized protein OS=Bacil...    35   2.9  
tr|Q2BB69|Q2BB69_9BACI Glyoxalase family protein OS=Bacillus sp....    35   3.8  
tr|B8H9C0|B8H9C0_9MICC Alanyl-tRNA synthetase OS=Arthrobacter ch...    34   5.0  
tr|B1YEB3|B1YEB3_EXIS2 Glyoxalase/bleomycin resistance protein/d...    33   8.6  
tr|Q29N02|Q29N02_DROPS GA20129 OS=Drosophila pseudoobscura pseud...    33   8.6  
tr|A7TMN5|A7TMN5_VANPO Putative uncharacterized protein OS=Vande...    33   8.6  

>tr|Q3XZI9|Q3XZI9_ENTFC Glyoxalase/bleomycin resistance
           protein/dioxygenase OS=Enterococcus faecium DO
           GN=EfaeDRAFT_1378 PE=4 SV=1
          Length = 324

 Score = 37.0 bits (84), Expect = 0.77
 Identities = 26/102 (25%), Positives = 46/102 (45%), Gaps = 9/102 (8%)
 Frame = +2

Query: 77  TERAGSLELLFQIGDRGEGERVKVEHTAVIVKGLEGFQHLKSERMNAAN---------IL 229
           T+ +G    LF+IG+ G G  + +EH   + K +EGF ++    +  A+         ++
Sbjct: 185 TDHSGDF-YLFEIGEGGNGASIIIEHRTDLPKAIEGFGNIHHLALRVADKEALEYWIQVI 243

Query: 230 EKLRILSGTCEDVFKDASDKEKDALRELIPLGFDSQRFMEDK 355
            K+ + +    D F   S+    A   L  L  D   F+ED+
Sbjct: 244 NKIELPNSGFVDRFYFQSEYFLAAHHVLFELATDGPGFLEDE 285


>tr|B8PL84|B8PL84_9APHY Predicted protein OS=Postia placenta
           Mad-698-R GN=POSPLDRAFT_99352 PE=4 SV=1
          Length = 290

 Score = 36.6 bits (83), Expect = 1.0
 Identities = 29/99 (29%), Positives = 45/99 (45%), Gaps = 6/99 (6%)
 Frame = +2

Query: 80  ERAGSLELLFQIGDRGEGERVKVEHTAVIVKGLEGFQHLKSERMNAANI------LEKLR 241
           E  G LE+L +  +RG  ER K +  A  ++  E   HL  E++  +N       +EK R
Sbjct: 112 EARGRLEMLEREEERGRVEREKWKKLARELEIKEHEMHLLEEQVGGSNATRVGADIEKTR 171

Query: 242 ILSGTCEDVFKDASDKEKDALRELIPLGFDSQRFMEDKD 358
            +          A  K+KDA  E+  L  D   F ++K+
Sbjct: 172 QMIADLTTTVNLAKQKQKDAQAEIKKLEKDMAEFKDNKE 210


>tr|A6CIV8|A6CIV8_9BACI Putative uncharacterized protein OS=Bacillus
           sp. SG-1 GN=BSG1_04460 PE=4 SV=1
          Length = 177

 Score = 35.0 bits (79), Expect = 2.9
 Identities = 19/71 (26%), Positives = 37/71 (52%)
 Frame = -1

Query: 463 KYQMNLFYRLKHSIYLSSVLAEYQKASFIFHLHDIILVLHKSL*VKS*WYQFPQGILLLV 284
           K+ + LF  +    Y+   L    + S++F     +L+L+K + + + WY+    ILL++
Sbjct: 26  KFILFLFIIMVSKRYIKGNLNRIDRTSYLFFNICFVLLLYKFVSLNTNWYKVKDNILLVI 85

Query: 283 RSILEDILTSP 251
            S ++ IL  P
Sbjct: 86  ASDIDRILLLP 96


>tr|Q2BB69|Q2BB69_9BACI Glyoxalase family protein OS=Bacillus sp.
           NRRL B-14911 GN=B14911_17115 PE=4 SV=1
          Length = 152

 Score = 34.7 bits (78), Expect = 3.8
 Identities = 14/28 (50%), Positives = 21/28 (75%)
 Frame = +2

Query: 104 LFQIGDRGEGERVKVEHTAVIVKGLEGF 187
           LF+IG+ G G +V VEH AV+ + ++GF
Sbjct: 19  LFEIGEGGNGAQVVVEHNAVLPQAMQGF 46


>tr|B8H9C0|B8H9C0_9MICC Alanyl-tRNA synthetase OS=Arthrobacter
           chlorophenolicus A6 GN=Achl_2015 PE=4 SV=1
          Length = 898

 Score = 34.3 bits (77), Expect = 5.0
 Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 6/87 (6%)
 Frame = +2

Query: 68  LGNTERAGSLELLFQIGDRGEGERVKVEHTAVIVKGLEGFQHLKSERMNAANILEKLRIL 247
           + NT   GSL LL +        RV+         G+E F+HL +ER     + + L++ 
Sbjct: 689 VANTSLIGSLSLLGEQSVGSGNRRVEA------FVGMEAFRHLAAERALVTELTDLLKVP 742

Query: 248 SGTCEDVFK------DASDKEKDALRE 310
           SG   D          A++KE D LR+
Sbjct: 743 SGQLADRISATLAKLKATEKELDRLRK 769


>tr|B1YEB3|B1YEB3_EXIS2 Glyoxalase/bleomycin resistance
           protein/dioxygenase OS=Exiguobacterium sibiricum (strain
           DSM 17290 / JCM 13490 / 255-15) GN=Exig_1136 PE=4 SV=1
          Length = 327

 Score = 33.5 bits (75), Expect = 8.6
 Identities = 16/36 (44%), Positives = 24/36 (66%)
 Frame = +2

Query: 80  ERAGSLELLFQIGDRGEGERVKVEHTAVIVKGLEGF 187
           ++AGSL L F++G  G G +V VEH  ++  G +GF
Sbjct: 185 DQAGSLHL-FEMGQGGNGAQVVVEHNLLLPSGRQGF 219


>tr|Q29N02|Q29N02_DROPS GA20129 OS=Drosophila pseudoobscura
           pseudoobscura GN=GA20129 PE=4 SV=2
          Length = 314

 Score = 33.5 bits (75), Expect = 8.6
 Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
 Frame = +2

Query: 161 VIVKGLEGFQHLKSER----MNAANILEKLRILSGTCEDVFKDASDKEKDALRELIPLGF 328
           +++  +E + + +S+R    + A+NI++KLR L G  E +  D  D   D   EL  L  
Sbjct: 38  IVLMDIESYGNGRSKRDSKHLAASNIMKKLRTLPGLSEHLSDDIGDNSSDLYDELKNLNR 97

Query: 329 DSQRFMED 352
           D  + + D
Sbjct: 98  DMLKELRD 105


>tr|A7TMN5|A7TMN5_VANPO Putative uncharacterized protein
           OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM
           70294) GN=Kpol_1066p13 PE=4 SV=1
          Length = 432

 Score = 33.5 bits (75), Expect = 8.6
 Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
 Frame = +2

Query: 80  ERAGSLELLFQIGDRGEGERVKVEHTAVIVKGLEGFQHLKSERMNAANILEKLRILSGTC 259
           E AGS E + Q+ D  E E++K      ++  + G+     +       LEKL + S   
Sbjct: 327 EYAGSTEGVEQLLDAIENEKLKSNKIGDLLSSI-GYNEEDEDVEELDKELEKLTLESDIA 385

Query: 260 EDVFKDASDKEK--DALRELIPLGFDSQR 340
           E+V K+  +K+K  D LR+LI +  + ++
Sbjct: 386 ENVDKEKENKDKQLDKLRDLISVSSELKK 414