BP919386 |
Clone id |
YMU001_000124_E08 |
Library |
YMU01 |
Length |
575 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000124_E08. |
Accession |
BP919386 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
CCACTTATGACCTTCTCAGACTGTTTCTTAGAGGGTGCAATGCTTCTCACTTCGATGCTT TGATCCAAGGGAACTGAACTTTGTTCCTCCACAGGGGCAGACTTCTCCCCATCCTTCGGT TCCTCCACACGGGCAGCCTTCTCCCCACCATTCAGACCATCCATAACACTCTCCTTTTCA TGGAGATTGTTGCCAGAACTTGCATTAGCTTCAGGAGCTGACGAGCTGGATACATGAATT AATGCTTCTGCAGACAACCCTTCCTTCTTTGACTCTTCAGCATTCTCAGCCTGTAGAAAC GAAGTACCAGCCAACGGCATCAAAGAATGCTCCTCTGGTTCTTCACCTGGTGCTACAATT TCTTGCTCTGCTACTGACACTTCACCCTCTAAAATTCCATCTCCACGGTCAAAAATTTCA TCTGCAACACTTTTCCTCATTTCTGCCACACTACCCTCTAATATAACCTGAGATCGTCCA TCATCTTGTTTCGGTTCCTCTTTCAATGGTTTGTCCTCAAAATCTGCAATTTTACCACCC TCAATCTCATCACTGCTCACATCAATCTTCTTCAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q5R452 |
Definition |
sp|Q5R452|SAFB1_PONAB Scaffold attachment factor B1 OS=Pongo abelii |
Align length |
207 |
Score (bit) |
36.6 |
E-value |
0.092 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A2E9E1 |
Definition |
tr|A2E9E1|A2E9E1_TRIVA Putative uncharacterized protein OS=Trichomonas vaginalis G3 |
Align length |
175 |
Score (bit) |
40.4 |
E-value |
0.07 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP919386|Adiantum capillus-veneris mRNA, clone: YMU001_000124_E08. (575 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A2E9E1|A2E9E1_TRIVA Putative uncharacterized protein OS=Trich... 40 0.070 tr|Q8LM10|Q8LM10_ORYSJ Putative uncharacterized protein OSJNAb00... 40 0.091 tr|Q0IYS7|Q0IYS7_ORYSJ Os10g0167500 protein OS=Oryza sativa subs... 40 0.091 tr|B8BFV3|B8BFV3_ORYSI Putative uncharacterized protein OS=Oryza... 40 0.091 tr|B0X1G5|B0X1G5_CULQU Microtubule-associated protein futsch OS=... 40 0.12 tr|A2EUJ3|A2EUJ3_TRIVA Erythrocyte binding protein, putative OS=... 40 0.12 tr|Q91255|Q91255_PETMA NF-180 OS=Petromyzon marinus PE=2 SV=1 39 0.16 tr|Q9LTP4|Q9LTP4_ARATH Similarity to mismatch repair protein Mut... 39 0.16 tr|A5K929|A5K929_PLAVI Putative uncharacterized protein OS=Plasm... 39 0.16 tr|B6MHW4|B6MHW4_BRAFL Putative uncharacterized protein OS=Branc... 39 0.27 tr|B8MET7|B8MET7_9EURO DEAD box RNA helicase (Hca4), putative OS... 38 0.45 tr|B6KJT3|B6KJT3_TOXGO RNA polymerase Rpb1 C-terminal repeat dom... 37 0.59 tr|A2RUZ3|A2RUZ3_DANRE Nefm protein OS=Danio rerio GN=nefm PE=2 ... 37 0.77 tr|A2E7B0|A2E7B0_TRIVA Putative uncharacterized protein OS=Trich... 37 0.77 tr|Q6DCC0|Q6DCC0_XENLA LOC397995 protein OS=Xenopus laevis GN=LO... 37 1.0 tr|O13099|O13099_XENLA Middle molecular weight neurofilament pro... 37 1.0 tr|Q4R4L6|Q4R4L6_MACFA Brain cDNA, clone: QflA-12673, similar to... 37 1.0 tr|B4H061|B4H061_DROPE GL14921 OS=Drosophila persimilis GN=GL149... 37 1.0 tr|B3L3B4|B3L3B4_PLAKH Putative uncharacterized protein OS=Plasm... 37 1.0 tr|A7AQL6|A7AQL6_BABBO MORN repeat protein OS=Babesia bovis GN=B... 37 1.0 tr|A2E5Y7|A2E5Y7_TRIVA Putative uncharacterized protein OS=Trich... 37 1.0 tr|B7ZLP6|B7ZLP6_HUMAN SAFB protein OS=Homo sapiens GN=SAFB PE=2... 37 1.0 tr|B7ZLP5|B7ZLP5_HUMAN SAFB protein OS=Homo sapiens GN=SAFB PE=2... 37 1.0 tr|B7Z5X3|B7Z5X3_HUMAN cDNA FLJ59404, highly similar to Scaffold... 37 1.0 tr|A8K329|A8K329_HUMAN cDNA FLJ76656, highly similar to Homo sap... 37 1.0 tr|A0AV56|A0AV56_HUMAN SAFB protein OS=Homo sapiens GN=SAFB PE=2... 37 1.0 tr|A5KBH3|A5KBH3_PLAVI Putative uncharacterized protein OS=Plasm... 36 1.3 tr|Q8YHE5|Q8YHE5_BRUME DIHYDROLIPOAMIDE ACETYLTRANSFERASE COMPON... 36 1.7 tr|B8F978|B8F978_9DELT Putative uncharacterized protein OS=Desul... 36 1.7 tr|Q8MTN7|Q8MTN7_TRISP Glutamic acid-rich protein cNBL1700 OS=Tr... 36 1.7
>tr|A2E9E1|A2E9E1_TRIVA Putative uncharacterized protein OS=Trichomonas vaginalis G3 GN=TVAG_364290 PE=4 SV=1 Length = 1533
Score = 40.4 bits (93), Expect = 0.070 Identities = 45/175 (25%), Positives = 77/175 (44%), Gaps = 19/175 (10%) Frame = -1
Query: 518 EDKPLKEEPKQDDGRSQVILEGSVAEMRKSVADEIFDRGDGILEGEVSVAEQEIVAPGEE 339 E+K + EEPK+++ R++ +E K +A + ++ +E + E+E P E+ Sbjct: 994 EEKSVDEEPKENNERNE-------SEKEKEIAKDESEK----VEEKSQQNEEESQKPDEK 1042
Query: 338 PEEHSLMPLAG--TSFLQAEN-------------AEESKKEGLSAEALIHVXXXXXXXXX 204 EE L+PL + L AEN EE +KE L+ E + Sbjct: 1043 EEEKPLLPLGNILKNNLSAENEEVKEENQNKEIPKEEEQKEILNEEKTENSNEDNETKEE 1102
Query: 203 XXXXXNLHEKESVMDGLNGGEKAARVEEPKDGEKSAP----VEEQSSVPLDQSIE 51 EK S+ GL K+A EP++ ++ P +E+ + P ++SIE Sbjct: 1103 QKENEETQEKPSL--GLGSMFKSALSAEPENKQEEKPDDDEQKEEENHPKEESIE 1155
>tr|Q8LM10|Q8LM10_ORYSJ Putative uncharacterized protein OSJNAb0015J03.11 (RNA recognition motif family protein, expressed) OS=Oryza sativa subsp. japonica GN=OSJNAb0015J03.11 PE=4 SV=1 Length = 728
Score = 40.0 bits (92), Expect = 0.091 Identities = 43/169 (25%), Positives = 66/169 (39%), Gaps = 8/169 (4%) Frame = -1
Query: 494 PKQDDGRSQVILEGSVAEMRKSVADEIFDRGDGILEGEVSVAEQEIVAPGEEPEE----H 327 P D G E VA ++S E+ DRG+ + + +V E P E+PEE Sbjct: 16 PAADGGAIADTAEAGVAAEKESDGMEVEDRGEVVSQEATAVKPDEAEEPEEDPEEVGEGA 75
Query: 326 SLMPLAGTSFLQAENAEES--KKEGLSAEALIHVXXXXXXXXXXXXXXNLHE--KESVMD 159 P AG + A AE E E + V HE +E D Sbjct: 76 EEAPAAGPGDVAAAAAESGPVAMEAGDGEPALEV------------AITAHEPVEEEPKD 123
Query: 158 GLNGGEKAARVEEPKDGEKSAPVEEQSSVPLDQSIEVRSIAPSKKQSEK 12 + GE+A EE ++ E++ E++ L+ E A S++ E+ Sbjct: 124 VMETGEEAIEPEEDEEPEEAEVEEDEEPEELEMEEEEPEDADSEESMEE 172
>tr|Q0IYS7|Q0IYS7_ORYSJ Os10g0167500 protein OS=Oryza sativa subsp. japonica GN=Os10g0167500 PE=4 SV=1 Length = 703
Score = 40.0 bits (92), Expect = 0.091 Identities = 43/169 (25%), Positives = 66/169 (39%), Gaps = 8/169 (4%) Frame = -1
Query: 494 PKQDDGRSQVILEGSVAEMRKSVADEIFDRGDGILEGEVSVAEQEIVAPGEEPEE----H 327 P D G E VA ++S E+ DRG+ + + +V E P E+PEE Sbjct: 16 PAADGGAIADTAEAGVAAEKESDGMEVEDRGEVVSQEATAVKPDEAEEPEEDPEEVGEGA 75
Query: 326 SLMPLAGTSFLQAENAEES--KKEGLSAEALIHVXXXXXXXXXXXXXXNLHE--KESVMD 159 P AG + A AE E E + V HE +E D Sbjct: 76 EEAPAAGPGDVAAAAAESGPVAMEAGDGEPALEV------------AITAHEPVEEEPKD 123
Query: 158 GLNGGEKAARVEEPKDGEKSAPVEEQSSVPLDQSIEVRSIAPSKKQSEK 12 + GE+A EE ++ E++ E++ L+ E A S++ E+ Sbjct: 124 VMETGEEAIEPEEDEEPEEAEVEEDEEPEELEMEEEEPEDADSEESMEE 172
>tr|B8BFV3|B8BFV3_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_32844 PE=4 SV=1 Length = 690
Score = 40.0 bits (92), Expect = 0.091 Identities = 43/169 (25%), Positives = 66/169 (39%), Gaps = 8/169 (4%) Frame = -1
Query: 494 PKQDDGRSQVILEGSVAEMRKSVADEIFDRGDGILEGEVSVAEQEIVAPGEEPEE----H 327 P D G E VA ++S E+ DRG+ + + +V E P E+PEE Sbjct: 16 PAADGGAIADTAEAGVAAEKESDGMEVEDRGEVVSQEATAVKPDEAEEPEEDPEEVGEGA 75
Query: 326 SLMPLAGTSFLQAENAEES--KKEGLSAEALIHVXXXXXXXXXXXXXXNLHE--KESVMD 159 P AG + A AE E E + V HE +E D Sbjct: 76 EEAPAAGPGDVAAAAAESGPVAMEAGDGEPALEV------------AITAHEPLEEEPKD 123
Query: 158 GLNGGEKAARVEEPKDGEKSAPVEEQSSVPLDQSIEVRSIAPSKKQSEK 12 + GE+A EE ++ E++ E++ L+ E A S++ E+ Sbjct: 124 VMETGEEAIEPEEDEEPEEAEVEEDEEPEELEMEEEEPEDADSEESMEE 172
>tr|B0X1G5|B0X1G5_CULQU Microtubule-associated protein futsch OS=Culex quinquefasciatus GN=CpipJ_CPIJ013059 PE=4 SV=1 Length = 4575
Score = 39.7 bits (91), Expect = 0.12 Identities = 46/173 (26%), Positives = 67/173 (38%), Gaps = 2/173 (1%) Frame = -1
Query: 515 DKPLKEEPKQDDGRSQVILEGSVAEMRKSVADEIFDRGDGILEGEVSVAEQEIVAPGEEP 336 +K + ++P DD ++ A +SVADE + LE E + A + P Sbjct: 1935 EKSVADKPLTDDDKA--------ASKPESVADEKTTSIEAKLEAEKEASRPASAASEKAP 1986
Query: 335 EEHSLMPLAGTSFLQAENAEESKKEGLSAEALIHVXXXXXXXXXXXXXXNLHEKESVMDG 156 E S+ A T ++ AE SK+ A HV EK V + Sbjct: 1987 SEKSVEKEAATE--KSPTAEASKEPSRPESAASHV-----------SEKAASEKIDVKEA 2033
Query: 155 LNGGEKAARVEEPKDGEKSAPVE--EQSSVPLDQSIEVRSIAPSKKQSEKVIS 3 A+ V E EKSA +E E+SS P + + A S+K K S Sbjct: 2034 SRPESVASHVSEKAASEKSATLEKPEESSRPASAASQASEKAASEKAEAKEAS 2086
>tr|A2EUJ3|A2EUJ3_TRIVA Erythrocyte binding protein, putative OS=Trichomonas vaginalis G3 GN=TVAG_031940 PE=4 SV=1 Length = 1185
Score = 39.7 bits (91), Expect = 0.12 Identities = 41/169 (24%), Positives = 71/169 (42%) Frame = -1
Query: 518 EDKPLKEEPKQDDGRSQVILEGSVAEMRKSVADEIFDRGDGILEGEVSVAEQEIVAPGEE 339 E+KP KEE K+++ + E E + + +E + + E AE++ P EE Sbjct: 721 EEKPAKEEEKEEEEKPAEEEEKKEEEEQLQLVEEEKPAEEEEKKEEEKPAEEQ-QQPAEE 779
Query: 338 PEEHSLMPLAGTSFLQAENAEESKKEGLSAEALIHVXXXXXXXXXXXXXXNLHEKESVMD 159 +E P+ QAE ++ K E E ++ + + KE + Sbjct: 780 EKEEEEKPVEEEE--QAEIPQDIKPEE-EEEYILQPVERNIDIDKEFHPIDQNTKELFEE 836
Query: 158 GLNGGEKAARVEEPKDGEKSAPVEEQSSVPLDQSIEVRSIAPSKKQSEK 12 E+ RVEE K E+ PVEE+ V ++ +E + +K E+ Sbjct: 837 EEEKKEEQQRVEEEKPVEEQQPVEEEKPVEEEKPVEEQQPVEEEKPVEE 885
Score = 36.2 bits (82), Expect = 1.3 Identities = 43/184 (23%), Positives = 75/184 (40%), Gaps = 15/184 (8%) Frame = -1
Query: 518 EDKPLKEEPKQDDGRSQVILEGSVAEMRKSVADEIFDRGDGILEGEVSVAEQEIVAPGEE 339 E+KP +EE K+++ + AE ++ A+E + + +E E + + P EE Sbjct: 754 EEKPAEEEEKKEEEKP--------AEEQQQPAEEEKEEEEKPVEEEEQAEIPQDIKP-EE 804
Query: 338 PEEHSLMPLAGTSFLQAE------------NAEESKKEG---LSAEALIHVXXXXXXXXX 204 EE+ L P+ + E EE KKE + E + Sbjct: 805 EEEYILQPVERNIDIDKEFHPIDQNTKELFEEEEEKKEEQQRVEEEKPVEEQQPVEEEKP 864
Query: 203 XXXXXNLHEKESVMDGLNGGEKAARVEEPKDGEKSAPVEEQSSVPLDQSIEVRSIAPSKK 24 + E++ V + E+ VEE K E+ PVEE+ V ++ +E A +K Sbjct: 865 VEEEKPVEEQQPVEEE-KPVEEQQPVEEEKPVEEQQPVEEEKPVEEEKPVEEEKPAEEEK 923
Query: 23 QSEK 12 +E+ Sbjct: 924 PAEE 927
>tr|Q91255|Q91255_PETMA NF-180 OS=Petromyzon marinus PE=2 SV=1 Length = 1110
Score = 39.3 bits (90), Expect = 0.16 Identities = 28/110 (25%), Positives = 52/110 (47%), Gaps = 4/110 (3%) Frame = -1
Query: 563 DVSSDEIEGGKIADFEDKPLK----EEPKQDDGRSQVILEGSVAEMRKSVADEIFDRGDG 396 +V +E E ++ + E + + EE ++ +G + EG AE + V +E ++ + Sbjct: 527 EVEKEEAEEAEVEEAEAEETEAEAAEEEEEAEGEEEAEAEGEEAEEAEEVEEEAIEKAEA 586
Query: 395 ILEGEVSVAEQEIVAPGEEPEEHSLMPLAGTSFLQAENAEESKKEGLSAE 246 E + V E+E A EE EE + + + E E ++EG +AE Sbjct: 587 A-EAKAEVEEEEAEAEEEEEEEAEEEEVEAETKEEVEAEAEVEEEGEAAE 635
>tr|Q9LTP4|Q9LTP4_ARATH Similarity to mismatch repair protein MutS OS=Arabidopsis thaliana PE=3 SV=1 Length = 748
Score = 39.3 bits (90), Expect = 0.16 Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 3/83 (3%) Frame = -1
Query: 566 IDVSSD---EIEGGKIADFEDKPLKEEPKQDDGRSQVILEGSVAEMRKSVADEIFDRGDG 396 +DV S+ + GG +A E + + E +Q++ S I SV E + + R DG Sbjct: 132 MDVGSEVQVRVSGGLLAILESERIVETLEQNESGSASIAIDSVMECATPMGRRLLSRADG 191
Query: 395 ILEGEVSVAEQEIVAPGEEPEEH 327 I+ G+ ++E + E EH Sbjct: 192 IIAGDTEISEGHFTSTQESLREH 214
>tr|A5K929|A5K929_PLAVI Putative uncharacterized protein OS=Plasmodium vivax GN=PVX_101530 PE=4 SV=1 Length = 367
Score = 39.3 bits (90), Expect = 0.16 Identities = 40/165 (24%), Positives = 71/165 (43%), Gaps = 2/165 (1%) Frame = -1
Query: 503 KEEPKQDDGRSQVILEGSVAEMRKSVADEIFDRGDGILEGEVSVAEQEIVAPGEEPEEHS 324 +EE ++G + + EG + + + + + ++EGE V E E V GEE E Sbjct: 78 EEEEAVEEGEEEAVEEGEEEVVEEEGEEVVEGEEEEVVEGEEEVVEDEEVVEGEEYAEGE 137
Query: 323 LMPLAGTSFLQAENAEESKKEGLSAEALIHVXXXXXXXXXXXXXXNLHEKESVMDG--LN 150 P+ G + + E E +E + E + E E V++G + Sbjct: 138 -EPVEGEEYAEGEEPVEG-EEPVEVEEYAEGEEPVEGEEYAEGEEPV-EGEEVVEGEEVV 194
Query: 149 GGEKAARVEEPKDGEKSAPVEEQSSVPLDQSIEVRSIAPSKKQSE 15 GE+ A EE +GE+ A EE +V ++ E +A ++ +E Sbjct: 195 EGEEVAEGEEVAEGEEVAEGEE--AVEGEEVAEGEEVAEGEEVAE 237
>tr|B6MHW4|B6MHW4_BRAFL Putative uncharacterized protein OS=Branchiostoma floridae GN=BRAFLDRAFT_123207 PE=4 SV=1 Length = 1097
Score = 38.5 bits (88), Expect = 0.27 Identities = 43/190 (22%), Positives = 75/190 (39%), Gaps = 6/190 (3%) Frame = -1
Query: 563 DVSSDEIEGGKIADFEDKPLKEEPKQDDGRS----QVILEGSVAEMRKSV--ADEIFDRG 402 DV DE G ++ +++ ++ + +G +V +GS E + V D G Sbjct: 205 DVHQDEEAEGDRSEPDEQEVEGQGSGAEGEGLEEEEVEGQGSEPEDAQQVEDTDHAHGPG 264
Query: 401 DGILEGEVSVAEQEIVAPGEEPEEHSLMPLAGTSFLQAENAEESKKEGLSAEALIHVXXX 222 DG E E V E E +EPE+ + + ENAEE ++E E Sbjct: 265 DGEEEAEQDVPEDEDAEENDEPEDST------QTVGSEENAEEMEEEEEEQE-------- 310
Query: 221 XXXXXXXXXXXNLHEKESVMDGLNGGEKAARVEEPKDGEKSAPVEEQSSVPLDQSIEVRS 42 + E+E + E+ E +D E A EE+ VP +++++ + Sbjct: 311 -----EEEEDEEMEEEEDEEEDEEEEEEVEENGEEEDEENGADEEEEEEVPPEENVDKET 365
Query: 41 IAPSKKQSEK 12 A + E+ Sbjct: 366 TAETAVHQEQ 375
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