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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP919390
Clone id YMU001_000124_E12
Library
Length 418
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000124_E12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
CAGCAATCTTCTGCCGTTGCATCTTCTCCGAAGATTTTGTTCTCCTCCTGGCAAATGTCT
AACTGTTTCATCAGCTCTTGATTTCGATTCTGAAGGTCATCTATCATGGATGCCTTGACT
TCAGCGATTTGAATGGTCTTTTTTGCTTCTAATAGGGCGGCTGCTTTTGATTTTGTCAAT
CTGTCAAGAGCTCTATGATTCTCTTGCAGCTTTGCAACTTCTTGCCGTGCAATCCTCAGT
TCGGCTTCAAGAGGTGCGATGATAACCTCTATTGGAGGCATATCCTCGTCCTTTTGTGCT
GCTTGGACTCTCCTTAGTGTTGCCTCTGCTGCAAATTGAGCTGCTAGTGCTGCTTTCTTC
TCATCGTTAATCCTTTTCACTTCCAAATTCTTGTTTTCTAGGAGGAGCTCTGTTTGCT
■■Homology search results ■■ -
sp_hit_id Q49A88
Definition sp|Q49A88|CCD14_HUMAN Coiled-coil domain-containing protein 14 OS=Homo sapiens
Align length 87
Score (bit) 29.6
E-value 4.9
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919390|Adiantum capillus-veneris mRNA, clone:
YMU001_000124_E12.
         (418 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q49A88|CCD14_HUMAN Coiled-coil domain-containing protein 14 O...    30   4.9  
sp|Q39238|TSL_ARATH Serine/threonine-protein kinase TOUSLED OS=A...    29   6.4  
sp|A8FV67|SYS_SHESH Seryl-tRNA synthetase OS=Shewanella sedimini...    29   8.4  
sp|Q01397|DYNA_NEUCR Dynactin, 150 kDa isoform OS=Neurospora cra...    29   8.4  

>sp|Q49A88|CCD14_HUMAN Coiled-coil domain-containing protein 14
           OS=Homo sapiens GN=CCDC14 PE=2 SV=2
          Length = 905

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
 Frame = -3

Query: 281 MPPIEVIIAPLEAELRIARQEVAKLQENHR---ALDRXXXXXXXXXXXXXKTIQIAEVKA 111
           M P+    A L  +LRI  Q++ + Q+  +   A+D                 Q+ E   
Sbjct: 436 MQPLRSENAQLRRQLRILNQQLREQQKTQKPSGAVDCNLELFSLQSLNMSLQNQLEESLK 495

Query: 110 SMIDDLQNRNQELMKQLDICQEENKIF 30
           S  + LQ++N+EL+K ++  ++ENK F
Sbjct: 496 SQ-ELLQSKNEELLKVIENQKDENKKF 521


>sp|Q39238|TSL_ARATH Serine/threonine-protein kinase TOUSLED
           OS=Arabidopsis thaliana GN=TOUSLED PE=1 SV=1
          Length = 688

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 16/45 (35%), Positives = 26/45 (57%)
 Frame = -3

Query: 317 LRRVQAAQKDEDMPPIEVIIAPLEAELRIARQEVAKLQENHRALD 183
           LR  + + +DED+  +   IA LE ELR +RQ+ ++     R L+
Sbjct: 190 LRNGECSLQDEDLKSLRAKIAMLEEELRKSRQDSSEYHHLVRNLE 234


>sp|A8FV67|SYS_SHESH Seryl-tRNA synthetase OS=Shewanella sediminis
           (strain HAW-EB3) GN=serS PE=3 SV=1
          Length = 428

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = -3

Query: 305 QAAQKDEDMPPIEVIIAPLEAELRIARQEVAKLQENHRAL 186
           QA  K ED+ PI   +  L ++L   +QE+A+L E   A+
Sbjct: 60  QAKAKGEDVAPIMAQVGDLGSQLDTKKQELAELLETLNAI 99


>sp|Q01397|DYNA_NEUCR Dynactin, 150 kDa isoform OS=Neurospora crassa
           GN=ro-3 PE=3 SV=3
          Length = 1367

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 13/42 (30%), Positives = 25/42 (59%)
 Frame = -3

Query: 131 QIAEVKASMIDDLQNRNQELMKQLDICQEENKIFGEDATAED 6
           + AEV    +D L+ +N+EL  ++++ +EEN  F    + E+
Sbjct: 423 ETAEVLKVELDALKQKNEELELEVEVLREENSEFTNGMSPEE 464
tr_hit_id A7P3V5
Definition tr|A7P3V5|A7P3V5_VITVI Chromosome chr1 scaffold_5, whole genome shotgun sequence OS=Vitis vinifera
Align length 116
Score (bit) 141.0
E-value 1.0e-32
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919390|Adiantum capillus-veneris mRNA, clone:
YMU001_000124_E12.
         (418 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7P3V5|A7P3V5_VITVI Chromosome chr1 scaffold_5, whole genome ...   141   1e-32
tr|Q653N3|Q653N3_ORYSJ Os06g0251700 protein OS=Oryza sativa subs...   139   5e-32
tr|B8B0D2|B8B0D2_ORYSI Putative uncharacterized protein OS=Oryza...   139   5e-32
tr|A3BAB2|A3BAB2_ORYSJ Putative uncharacterized protein OS=Oryza...   139   5e-32
tr|Q84VC2|Q84VC2_ORYSJ Putative myosin heavy chain (Fragment) OS...   139   9e-32
tr|Q2QLI6|Q2QLI6_ORYSJ Os12g0640900 protein OS=Oryza sativa subs...   139   9e-32
tr|B8BN81|B8BN81_ORYSI Putative uncharacterized protein OS=Oryza...   139   9e-32
tr|A3CJW0|A3CJW0_ORYSJ Putative uncharacterized protein OS=Oryza...   139   9e-32
tr|Q6Z746|Q6Z746_ORYSJ Os02g0736100 protein OS=Oryza sativa subs...   137   3e-31
tr|B8AI31|B8AI31_ORYSI Putative uncharacterized protein OS=Oryza...   137   3e-31
tr|A3AB50|A3AB50_ORYSJ Putative uncharacterized protein OS=Oryza...   137   3e-31
tr|A9TW40|A9TW40_PHYPA Predicted protein (Fragment) OS=Physcomit...   137   3e-31
tr|Q9FXK0|Q9FXK0_ARATH F5A9.19 OS=Arabidopsis thaliana PE=4 SV=1      135   1e-30
tr|Q8L7S4|Q8L7S4_ARATH At1g68060/T23K23_9 OS=Arabidopsis thalian...   135   1e-30
tr|Q3MQ34|Q3MQ34_ARATH 70 kDa microtubule associated protein Typ...   135   1e-30
tr|A7QJH6|A7QJH6_VITVI Chromosome chr8 scaffold_106, whole genom...   135   1e-30
tr|A5AJJ7|A5AJJ7_VITVI Putative uncharacterized protein OS=Vitis...   135   1e-30
tr|B7ZZU6|B7ZZU6_MAIZE Putative uncharacterized protein OS=Zea m...   134   2e-30
tr|B6U1S0|B6U1S0_MAIZE ATMAP70-3 OS=Zea mays PE=2 SV=1                134   2e-30
tr|Q9C9X0|Q9C9X0_ARATH Putative uncharacterized protein T23K23.9...   134   3e-30
tr|Q9ZUA3|Q9ZUA3_ARATH Putative myosin heavy chain-like protein ...   133   4e-30
tr|Q9LQU7|Q9LQU7_ARATH F10B6.24 (70 kDa microtubule associated p...   133   5e-30
tr|A9RVX1|A9RVX1_PHYPA Predicted protein (Fragment) OS=Physcomit...   132   1e-29
tr|A9SYA5|A9SYA5_PHYPA Predicted protein OS=Physcomitrella paten...   129   9e-29
tr|A9TH17|A9TH17_PHYPA Predicted protein (Fragment) OS=Physcomit...   124   2e-27
tr|Q10PZ6|Q10PZ6_ORYSJ Os03g0215700 protein OS=Oryza sativa subs...    87   5e-16
tr|B8AQT6|B8AQT6_ORYSI Putative uncharacterized protein OS=Oryza...    87   5e-16
tr|B6U2C6|B6U2C6_MAIZE ATMAP70-2 OS=Zea mays PE=2 SV=1                 83   8e-15
tr|A7R2A0|A7R2A0_VITVI Chromosome undetermined scaffold_410, who...    83   8e-15
tr|Q9M0M6|Q9M0M6_ARATH Putative uncharacterized protein AT4g1722...    81   2e-14

>tr|A7P3V5|A7P3V5_VITVI Chromosome chr1 scaffold_5, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00030592001
           PE=4 SV=1
          Length = 637

 Score =  141 bits (356), Expect = 1e-32
 Identities = 71/116 (61%), Positives = 89/116 (76%)
 Frame = -3

Query: 380 VKRINDEKKXXXXXXXXXXATLRRVQAAQKDEDMPPIEVIIAPLEAELRIARQEVAKLQE 201
           +K+INDEKK          ATLRRV AAQKD+DMPPIE I+APLEAEL++ARQE+AKLQ+
Sbjct: 147 IKKINDEKKASMAAQFAAEATLRRVHAAQKDDDMPPIEAILAPLEAELKLARQEIAKLQD 206

Query: 200 NHRALDRXXXXXXXXXXXXXKTIQIAEVKASMIDDLQNRNQELMKQLDICQEENKI 33
           +++ALDR             +T+Q+A  KASM+DDLQN+NQELMKQ++ICQEENKI
Sbjct: 207 DNKALDRLTKSKEAALLEAERTVQVALAKASMVDDLQNKNQELMKQIEICQEENKI 262


>tr|Q653N3|Q653N3_ORYSJ Os06g0251700 protein OS=Oryza sativa subsp.
           japonica GN=P0431E05.19 PE=2 SV=1
          Length = 608

 Score =  139 bits (351), Expect = 5e-32
 Identities = 71/116 (61%), Positives = 88/116 (75%)
 Frame = -3

Query: 380 VKRINDEKKXXXXXXXXXXATLRRVQAAQKDEDMPPIEVIIAPLEAELRIARQEVAKLQE 201
           VK+INDEKK          ATLRRV AAQKD+DMPPIE I+APLEAEL++ARQE+AKLQ+
Sbjct: 109 VKKINDEKKAAMAAQFAAEATLRRVHAAQKDDDMPPIEAILAPLEAELKLARQEIAKLQD 168

Query: 200 NHRALDRXXXXXXXXXXXXXKTIQIAEVKASMIDDLQNRNQELMKQLDICQEENKI 33
           ++RALDR             +T++IA  KA+M+DDLQN+NQELMKQ++IC EENKI
Sbjct: 169 DNRALDRLTKQKEAALLDAERTVEIAMAKAAMVDDLQNKNQELMKQIEICHEENKI 224


>tr|B8B0D2|B8B0D2_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_22392 PE=4 SV=1
          Length = 608

 Score =  139 bits (351), Expect = 5e-32
 Identities = 71/116 (61%), Positives = 88/116 (75%)
 Frame = -3

Query: 380 VKRINDEKKXXXXXXXXXXATLRRVQAAQKDEDMPPIEVIIAPLEAELRIARQEVAKLQE 201
           VK+INDEKK          ATLRRV AAQKD+DMPPIE I+APLEAEL++ARQE+AKLQ+
Sbjct: 109 VKKINDEKKAAMAAQFAAEATLRRVHAAQKDDDMPPIEAILAPLEAELKLARQEIAKLQD 168

Query: 200 NHRALDRXXXXXXXXXXXXXKTIQIAEVKASMIDDLQNRNQELMKQLDICQEENKI 33
           ++RALDR             +T++IA  KA+M+DDLQN+NQELMKQ++IC EENKI
Sbjct: 169 DNRALDRLTKQKEAALLDAERTVEIAMAKAAMVDDLQNKNQELMKQIEICHEENKI 224


>tr|A3BAB2|A3BAB2_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_019984 PE=4 SV=1
          Length = 605

 Score =  139 bits (351), Expect = 5e-32
 Identities = 71/116 (61%), Positives = 88/116 (75%)
 Frame = -3

Query: 380 VKRINDEKKXXXXXXXXXXATLRRVQAAQKDEDMPPIEVIIAPLEAELRIARQEVAKLQE 201
           VK+INDEKK          ATLRRV AAQKD+DMPPIE I+APLEAEL++ARQE+AKLQ+
Sbjct: 74  VKKINDEKKAAMAAQFAAEATLRRVHAAQKDDDMPPIEAILAPLEAELKLARQEIAKLQD 133

Query: 200 NHRALDRXXXXXXXXXXXXXKTIQIAEVKASMIDDLQNRNQELMKQLDICQEENKI 33
           ++RALDR             +T++IA  KA+M+DDLQN+NQELMKQ++IC EENKI
Sbjct: 134 DNRALDRLTKQKEAALLDAERTVEIAMAKAAMVDDLQNKNQELMKQIEICHEENKI 189


>tr|Q84VC2|Q84VC2_ORYSJ Putative myosin heavy chain (Fragment)
           OS=Oryza sativa subsp. japonica PE=2 SV=1
          Length = 455

 Score =  139 bits (349), Expect = 9e-32
 Identities = 71/115 (61%), Positives = 87/115 (75%)
 Frame = -3

Query: 377 KRINDEKKXXXXXXXXXXATLRRVQAAQKDEDMPPIEVIIAPLEAELRIARQEVAKLQEN 198
           K+INDEKK          ATLRRV AAQKD+DMPPIE I+APLEAEL++AR E+AKLQ++
Sbjct: 106 KKINDEKKAALAAQFAAEATLRRVHAAQKDDDMPPIEAILAPLEAELKLARHEIAKLQDD 165

Query: 197 HRALDRXXXXXXXXXXXXXKTIQIAEVKASMIDDLQNRNQELMKQLDICQEENKI 33
           +RALDR             +T+QIA  KAS++DDLQN+NQELMKQ++ICQEENKI
Sbjct: 166 NRALDRLTKSKEAALLEAERTVQIALAKASLVDDLQNKNQELMKQIEICQEENKI 220


>tr|Q2QLI6|Q2QLI6_ORYSJ Os12g0640900 protein OS=Oryza sativa subsp.
           japonica GN=Os12g0640900 PE=2 SV=1
          Length = 567

 Score =  139 bits (349), Expect = 9e-32
 Identities = 71/115 (61%), Positives = 87/115 (75%)
 Frame = -3

Query: 377 KRINDEKKXXXXXXXXXXATLRRVQAAQKDEDMPPIEVIIAPLEAELRIARQEVAKLQEN 198
           K+INDEKK          ATLRRV AAQKD+DMPPIE I+APLEAEL++AR E+AKLQ++
Sbjct: 106 KKINDEKKAALAAQFAAEATLRRVHAAQKDDDMPPIEAILAPLEAELKLARHEIAKLQDD 165

Query: 197 HRALDRXXXXXXXXXXXXXKTIQIAEVKASMIDDLQNRNQELMKQLDICQEENKI 33
           +RALDR             +T+QIA  KAS++DDLQN+NQELMKQ++ICQEENKI
Sbjct: 166 NRALDRLTKSKEAALLEAERTVQIALAKASLVDDLQNKNQELMKQIEICQEENKI 220


>tr|B8BN81|B8BN81_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_39288 PE=4 SV=1
          Length = 535

 Score =  139 bits (349), Expect = 9e-32
 Identities = 71/115 (61%), Positives = 87/115 (75%)
 Frame = -3

Query: 377 KRINDEKKXXXXXXXXXXATLRRVQAAQKDEDMPPIEVIIAPLEAELRIARQEVAKLQEN 198
           K+INDEKK          ATLRRV AAQKD+DMPPIE I+APLEAEL++AR E+AKLQ++
Sbjct: 106 KKINDEKKAALAAQFAAEATLRRVHAAQKDDDMPPIEAILAPLEAELKLARHEIAKLQDD 165

Query: 197 HRALDRXXXXXXXXXXXXXKTIQIAEVKASMIDDLQNRNQELMKQLDICQEENKI 33
           +RALDR             +T+QIA  KAS++DDLQN+NQELMKQ++ICQEENKI
Sbjct: 166 NRALDRLTKSKEAALLEAERTVQIALAKASLVDDLQNKNQELMKQIEICQEENKI 220


>tr|A3CJW0|A3CJW0_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_035582 PE=4 SV=1
          Length = 555

 Score =  139 bits (349), Expect = 9e-32
 Identities = 71/115 (61%), Positives = 87/115 (75%)
 Frame = -3

Query: 377 KRINDEKKXXXXXXXXXXATLRRVQAAQKDEDMPPIEVIIAPLEAELRIARQEVAKLQEN 198
           K+INDEKK          ATLRRV AAQKD+DMPPIE I+APLEAEL++AR E+AKLQ++
Sbjct: 106 KKINDEKKAALAAQFAAEATLRRVHAAQKDDDMPPIEAILAPLEAELKLARHEIAKLQDD 165

Query: 197 HRALDRXXXXXXXXXXXXXKTIQIAEVKASMIDDLQNRNQELMKQLDICQEENKI 33
           +RALDR             +T+QIA  KAS++DDLQN+NQELMKQ++ICQEENKI
Sbjct: 166 NRALDRLTKSKEAALLEAERTVQIALAKASLVDDLQNKNQELMKQIEICQEENKI 220


>tr|Q6Z746|Q6Z746_ORYSJ Os02g0736100 protein OS=Oryza sativa subsp.
           japonica GN=P0487D09.19-1 PE=2 SV=1
          Length = 599

 Score =  137 bits (345), Expect = 3e-31
 Identities = 69/116 (59%), Positives = 88/116 (75%)
 Frame = -3

Query: 380 VKRINDEKKXXXXXXXXXXATLRRVQAAQKDEDMPPIEVIIAPLEAELRIARQEVAKLQE 201
           +K+ NDEKK          ATLRRV AAQKD+DMPPIE I+APLEAEL++ARQE+AKLQ+
Sbjct: 112 LKKTNDEKKAAMAAQFAAEATLRRVHAAQKDDDMPPIEAILAPLEAELKLARQEIAKLQD 171

Query: 200 NHRALDRXXXXXXXXXXXXXKTIQIAEVKASMIDDLQNRNQELMKQLDICQEENKI 33
           ++RALDR             +T++IA  KA+M+DD+QN+NQELMKQ++ICQEENKI
Sbjct: 172 DNRALDRLTKQKEAALLEAERTVEIALAKAAMVDDMQNKNQELMKQIEICQEENKI 227


>tr|B8AI31|B8AI31_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_08848 PE=4 SV=1
          Length = 599

 Score =  137 bits (345), Expect = 3e-31
 Identities = 69/116 (59%), Positives = 88/116 (75%)
 Frame = -3

Query: 380 VKRINDEKKXXXXXXXXXXATLRRVQAAQKDEDMPPIEVIIAPLEAELRIARQEVAKLQE 201
           +K+ NDEKK          ATLRRV AAQKD+DMPPIE I+APLEAEL++ARQE+AKLQ+
Sbjct: 112 LKKTNDEKKAAMAAQFAAEATLRRVHAAQKDDDMPPIEAILAPLEAELKLARQEIAKLQD 171

Query: 200 NHRALDRXXXXXXXXXXXXXKTIQIAEVKASMIDDLQNRNQELMKQLDICQEENKI 33
           ++RALDR             +T++IA  KA+M+DD+QN+NQELMKQ++ICQEENKI
Sbjct: 172 DNRALDRLTKQKEAALLEAERTVEIALAKAAMVDDMQNKNQELMKQIEICQEENKI 227