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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP919392
Clone id YMU001_000124_F02
Library
Length 400
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000124_F02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
TTTTCAGTAATCCCTGTGGCATACATGTGTCACATTGAAATAAGAATCGGAATGGAAAAG
GGAACTCAGAACAAGGAATGGGGGCCCAAAATGGCCATTCCCTCTGGCTGTGCCTCTGTA
CCCAGTCCTTACATTCTTCACTGAGATACATCAATTACCATGCTACAATGTCCATCAACA
AATATTTGTATGATAAAAACTTCCAATCTCCATTGTGTGCAAACAGCATGCCCAAACTCC
CAGAAGGGCGACGAAAAATTTCTTTCACTTTTAAGTAGCTACACCAATCCATTTCAGCAT
ATGACATATTGTCCAAAGTGTAAGCCACAGATTGTAAAGCTTTCGCCACTCAAGCACATG
TATAATGATGACAAGTGAACATTGGTTAGTGCTACATTTC
■■Homology search results ■■ -
sp_hit_id Q9Z0G7
Definition sp|Q9Z0G7|ZBT22_MOUSE Zinc finger and BTB domain-containing protein 22 OS=Mus musculus
Align length 57
Score (bit) 30.8
E-value 2.2
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919392|Adiantum capillus-veneris mRNA, clone:
YMU001_000124_F02.
         (400 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9Z0G7|ZBT22_MOUSE Zinc finger and BTB domain-containing prot...    31   2.2  
sp|P39846|PPSB_BACSU Plipastatin synthetase subunit B OS=Bacillu...    29   6.3  
sp|P35524|CLCN1_RAT Chloride channel protein, skeletal muscle OS...    29   8.3  

>sp|Q9Z0G7|ZBT22_MOUSE Zinc finger and BTB domain-containing protein
           22 OS=Mus musculus GN=Zbtb22 PE=2 SV=1
          Length = 638

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
 Frame = +3

Query: 51  NGKGNSEQGMGAQNGHSLWLCLCTQSL-HSSLRYINYHATMSINKYLYDKNFQSPLC 218
           +G G +  G G  +G+ ++LC C ++  H S+R  + H  M +N     + F  P+C
Sbjct: 465 SGSGGAPGGTGNSDGNKIFLCHCGKAFSHKSMR--DRHVNMHLNL----RPFDCPVC 515


>sp|P39846|PPSB_BACSU Plipastatin synthetase subunit B OS=Bacillus
            subtilis GN=ppsB PE=1 SV=1
          Length = 2560

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 14/45 (31%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
 Frame = -1

Query: 271  KVKEIFRRPSGSL---GMLFAHNGDWKFLSYKYLLMDIVAW*LMY 146
            +++E  R  +G L   G+    NGD  FL+  +L++D V+W +++
Sbjct: 2192 RMQEHIRLETGPLLHAGLFRTENGDHLFLTIHHLVVDAVSWRILF 2236


>sp|P35524|CLCN1_RAT Chloride channel protein, skeletal muscle
           OS=Rattus norvegicus GN=Clcn1 PE=2 SV=1
          Length = 994

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 29/115 (25%), Positives = 42/115 (36%), Gaps = 7/115 (6%)
 Frame = -1

Query: 331 SVAYTLDNMSYAEMDWCSYLKVKEIFRRPSGSLGMLFAHNGDWKFLSYKYLLMDIVAW*L 152
           S   +LD   Y++   C + ++  + RR  G          DW FL    LLM +V+W +
Sbjct: 86  STVDSLDEDHYSKCQDCVH-RLGRVLRRKLGE---------DWIFLVLLGLLMALVSWCM 135

Query: 151 MYLSE---ECKDWVQRHSQREWPF----WAPIPCSEFPFPFRFLFQCDTCMPQGL 8
            Y+S    +   W     Q   P     W   P     F   F   C    PQ +
Sbjct: 136 DYVSAKSLQAYKWTYAQMQPSLPLQYLAWVTFPLILILFSALF---CQLISPQAV 187
tr_hit_id B2A6F0
Definition tr|B2A6F0|B2A6F0_NATTJ 1,4-alpha-glucan branching enzyme OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF)
Align length 119
Score (bit) 38.5
E-value 0.17
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919392|Adiantum capillus-veneris mRNA, clone:
YMU001_000124_F02.
         (400 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B2A6F0|B2A6F0_NATTJ 1,4-alpha-glucan branching enzyme OS=Natr...    39   0.17 
tr|B7K6R8|B7K6R8_9CHRO Glycosyl transferase family 2 OS=Cyanothe...    34   4.1  
tr|Q7RCY4|Q7RCY4_PLAYO SNF2 family N-terminal domain, putative (...    34   4.1  
tr|Q4YB42|Q4YB42_PLABE Iswi protein homologue, putative (Fragmen...    33   5.4  
tr|B6I1C7|B6I1C7_ECOSE Putative phage endolysin OS=Escherichia c...    33   7.0  
tr|A7ZKQ6|A7ZKQ6_ECO24 Putative uncharacterized protein OS=Esche...    33   7.0  
tr|Q9MBZ3|Q9MBZ3_9CAUD Putative uncharacterized protein (Putativ...    33   7.0  
tr|Q4KAM7|Q4KAM7_PSEF5 Tryptophan halogenase PrnA OS=Pseudomonas...    33   9.1  
tr|Q9RPG8|Q9RPG8_9PSED Tryptophan halogenase OS=Pseudomonas chlo...    33   9.1  
tr|A3K4F3|A3K4F3_9RHOB ABC transporter, binding protein OS=Sagit...    33   9.1  
tr|Q2L6M9|Q2L6M9_DUGJA Innexin5 OS=Dugesia japonica GN=inx5 PE=2...    33   9.1  

>tr|B2A6F0|B2A6F0_NATTJ 1,4-alpha-glucan branching enzyme
           OS=Natranaerobius thermophilus (strain ATCC BAA-1301 /
           DSM 18059 / JW/NM-WN-LF) GN=Nther_0562 PE=4 SV=1
          Length = 638

 Score = 38.5 bits (88), Expect = 0.17
 Identities = 29/119 (24%), Positives = 53/119 (44%), Gaps = 11/119 (9%)
 Frame = -1

Query: 331 SVAYTLDNMSYAEMDWCSYLKVKEIFRRPSGSLGMLFAHNGDWK------FLSYKYLLMD 170
           S+ Y+L+  ++ + +W    + + I ++P   + +   H G WK      FLSY+ L  D
Sbjct: 121 SIVYSLEGYNWGDREWQRKKRRENILKKP---VSIYEVHLGSWKKTEDGDFLSYRELAHD 177

Query: 169 IVAW--*LMYLSEECKDWVQRHSQREWPFWAP---IPCSEFPFPFRFLFQCDTCMPQGL 8
           +V +   + Y   E    V+    R W + A       S +  P  F++  D C  +G+
Sbjct: 178 LVDYVKEMGYTHIELLPVVEHPFDRSWGYQATGYFSVTSRYGTPKDFMYFVDRCHQEGI 236


>tr|B7K6R8|B7K6R8_9CHRO Glycosyl transferase family 2 OS=Cyanothece
           sp. PCC 7424 GN=PCC7424_4247 PE=4 SV=1
          Length = 312

 Score = 33.9 bits (76), Expect = 4.1
 Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 12/77 (15%)
 Frame = -1

Query: 373 CHHYTCA*VAKALQSVA---YTLDNMSYAEMDWCSYLKVKEIFRRPSG---------SLG 230
           C H     +AKA+QS+    + L+N     +D CS  + KE+  + +G         +LG
Sbjct: 10  CTHNRSQYLAKAIQSLLNQQFPLENYEIIIIDNCSTDQTKEVVEQLAGKNLRYIYEPTLG 69

Query: 229 MLFAHNGDWKFLSYKYL 179
           + +A N  WK    KY+
Sbjct: 70  LSYARNTGWKNAQGKYV 86


>tr|Q7RCY4|Q7RCY4_PLAYO SNF2 family N-terminal domain, putative
           (Fragment) OS=Plasmodium yoelii yoelii GN=PY05642 PE=4
           SV=1
          Length = 1312

 Score = 33.9 bits (76), Expect = 4.1
 Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
 Frame = +1

Query: 184 ICMIKTSNLHCVQT-ACPNSQKGDEKFLSLLSSYTNPFQHMTYCPKCKPQIVKLSPLKHM 360
           IC  K+SNL  +    CPNS       +S L   T P     YCP CKP+  K   ++ M
Sbjct: 74  ICREKSSNLILLLCDGCPNSYH-----VSCLGLQTEPESEKWYCPVCKPEEHKNLDIRRM 128


>tr|Q4YB42|Q4YB42_PLABE Iswi protein homologue, putative (Fragment)
           OS=Plasmodium berghei GN=PB000309.00.0 PE=4 SV=1
          Length = 1164

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 22/60 (36%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
 Frame = +1

Query: 184 ICMIKTSNLHCVQT-ACPNSQKGDEKFLSLLSSYTNPFQHMTYCPKCKPQIVKLSPLKHM 360
           IC  K SNL  +    CPNS       +S L   T P     YCP CKP+  K   ++ M
Sbjct: 74  ICREKASNLILLLCDGCPNSYH-----VSCLGLQTEPESEKWYCPVCKPEEHKNLDIRRM 128


>tr|B6I1C7|B6I1C7_ECOSE Putative phage endolysin OS=Escherichia coli
           (strain SE11) GN=ECSE_1667 PE=4 SV=1
          Length = 125

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 17/49 (34%), Positives = 25/49 (51%)
 Frame = -1

Query: 340 ALQSVAYTLDNMSYAEMDWCSYLKVKEIFRRPSGSLGMLFAHNGDWKFL 194
           A+  VAY    +S+   DW  Y K+ + F++ +  LG      GDWK L
Sbjct: 70  AVDVVAYIGSQVSW---DWPLYEKIAQAFKQAAAELGTAIEWGGDWKTL 115


>tr|A7ZKQ6|A7ZKQ6_ECO24 Putative uncharacterized protein
           OS=Escherichia coli O139:H28 (strain E24377A / ETEC)
           GN=EcE24377A_1278 PE=4 SV=1
          Length = 125

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 17/49 (34%), Positives = 25/49 (51%)
 Frame = -1

Query: 340 ALQSVAYTLDNMSYAEMDWCSYLKVKEIFRRPSGSLGMLFAHNGDWKFL 194
           A+  VAY    +S+   DW  Y K+ + F++ +  LG      GDWK L
Sbjct: 70  AVDVVAYIGSQVSW---DWPLYEKIAQAFKQAAAELGTAIEWGGDWKTL 115


>tr|Q9MBZ3|Q9MBZ3_9CAUD Putative uncharacterized protein (Putative
           endolysin) OS=Enterobacteria phage phiP27 PE=4 SV=1
          Length = 125

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 17/49 (34%), Positives = 25/49 (51%)
 Frame = -1

Query: 340 ALQSVAYTLDNMSYAEMDWCSYLKVKEIFRRPSGSLGMLFAHNGDWKFL 194
           A+  VAY    +S+   DW  Y K+ + F++ +  LG      GDWK L
Sbjct: 70  AVDVVAYIGSQVSW---DWPLYEKIAQAFKQAAAELGTAIEWGGDWKTL 115


>tr|Q4KAM7|Q4KAM7_PSEF5 Tryptophan halogenase PrnA OS=Pseudomonas
           fluorescens (strain Pf-5 / ATCC BAA-477) GN=prnA PE=4
           SV=1
          Length = 537

 Score = 32.7 bits (73), Expect = 9.1
 Identities = 21/94 (22%), Positives = 43/94 (45%), Gaps = 10/94 (10%)
 Frame = -1

Query: 337 LQSVAYTLDNMSYAEMDWCSYLKVKEIFRRPSGSLGMLFAHNGDWKFL------SYKYLL 176
           L  + + +     A ++ C  + +   F  P  S G+ F +   ++ +      S+   L
Sbjct: 314 LNQIKFRVGRNKRAWVNNCVSIGLSSCFLEPLESTGIYFIYAALYQLVKHFPDTSFDPRL 373

Query: 175 MDIVAW*LMYLSEECKDWVQRH----SQREWPFW 86
            D     ++Y+ ++C+D+VQ H    S+ + PFW
Sbjct: 374 RDAFNAEIVYMFDDCRDFVQAHYFTTSREDTPFW 407


>tr|Q9RPG8|Q9RPG8_9PSED Tryptophan halogenase OS=Pseudomonas
           chlororaphis subsp. aureofaciens GN=prnA PE=4 SV=1
          Length = 538

 Score = 32.7 bits (73), Expect = 9.1
 Identities = 21/94 (22%), Positives = 43/94 (45%), Gaps = 10/94 (10%)
 Frame = -1

Query: 337 LQSVAYTLDNMSYAEMDWCSYLKVKEIFRRPSGSLGMLFAHNGDWKFL------SYKYLL 176
           L  + + +     A ++ C  + +   F  P  S G+ F +   ++ +      S+   L
Sbjct: 314 LNQIKFRVGRNKRAWVNNCVSIGLSSCFLEPLESTGIYFIYAALYQLVKHFPDTSFDPRL 373

Query: 175 MDIVAW*LMYLSEECKDWVQRH----SQREWPFW 86
            D     ++Y+ ++C+D+VQ H    S+ + PFW
Sbjct: 374 SDAFNAEIVYMFDDCRDFVQAHYFTASREDTPFW 407


>tr|A3K4F3|A3K4F3_9RHOB ABC transporter, binding protein
           OS=Sagittula stellata E-37 GN=SSE37_01325 PE=4 SV=1
          Length = 425

 Score = 32.7 bits (73), Expect = 9.1
 Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 6/72 (8%)
 Frame = -1

Query: 283 CSYLKVKEIFRRPSGSLGMLFAHNGDWKFLSYKYLLMDIVAW*LMYLSEE------CKDW 122
           C Y  +KE +R   G +G+    +G  K  +Y+Y+   +  W   YL+ E          
Sbjct: 294 CVYQPLKEGYRAWGGGMGLARGLDGLQKDAAYEYINWYLSGWAGAYLNREGYYSGVLSTA 353

Query: 121 VQRHSQREWPFW 86
            Q  ++ EW FW
Sbjct: 354 KQYMTENEWGFW 365