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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP919394
Clone id YMU001_000124_F04
Library
Length 534
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000124_F04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
CTTCCATGCCTTTCCTCACATTCTCTTTGTGGCATTTAGTCTTCAACAACCAACTTATCC
AAGTCTTCAGTGTCAATAATGTATCGAGAAGTCTCGAATAAACCCTCCTGGATTGCACAA
TCTCTTCTCGTATTGACACTTAAGCAGAGGGAAAGCTTCCTATCATCATCATTGGCATGA
CCTTTTGACAATTGTGTATGCCTCCTAACGGGACCTCCTTGCTCTGACATGTTTGCATCC
AGACCCATTGGAGAAAAAACTTCAAAACTATCCTGGGATAGTGGCAGATCAAGTTCAACT
AAGCTTTTGCAGCCATCATGAAACTTCATCGAGTCACTGACATTGCCCCAAGAGGACCCG
TTTTCCTTTTCAAGCAAGGAAGATTGTGCCGAGTCAATAGAGGAGCAATCTATTTTTATA
ATTGGTTGTTGCCAATTAACTTTCTGCGGTATCGAATTATATAGTTCTGTGTCACTCCAC
AAAGAGGAGCTTCCCTCCTCTTCTACTTCTAAATCTGTCTGTACTGAAGAAGGA
■■Homology search results ■■ -
sp_hit_id Q6FPI5
Definition sp|Q6FPI5|SED4_CANGA Putative guanine nucleotide-exchange factor SED4 OS=Candida glabrata
Align length 147
Score (bit) 32.3
E-value 1.5
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919394|Adiantum capillus-veneris mRNA, clone:
YMU001_000124_F04.
         (534 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q6FPI5|SED4_CANGA Putative guanine nucleotide-exchange factor...    32   1.5  
sp|Q961D9|BCL9_DROME Protein BCL9 homolog OS=Drosophila melanoga...    31   4.3  
sp|O31976|YOMI_BACSU SPBc2 prophage-derived uncharacterized tran...    30   7.3  
sp|Q0GNC1|INF2_MOUSE Inverted formin-2 OS=Mus musculus GN=Inf2 P...    30   7.3  
sp|Q5BK67|TIFAB_RAT TRAF-interacting protein with FHA domain-con...    30   9.5  

>sp|Q6FPI5|SED4_CANGA Putative guanine nucleotide-exchange factor SED4
            OS=Candida glabrata GN=SED4 PE=3 SV=1
          Length = 1029

 Score = 32.3 bits (72), Expect = 1.5
 Identities = 39/147 (26%), Positives = 58/147 (39%), Gaps = 20/147 (13%)
 Frame = -2

Query: 530  SSVQTDLEVEEEGSSSLWSDTELYN-------------SIPQKVNWQQPIIKIDCSSIDS 390
            SS++       E S  + S+T +               S   KVN  Q I KID SS   
Sbjct: 601  SSLEEGRNTTSESSREISSETSIIKEDMLYPTENVSEQSATDKVNKNQSIDKIDVSS--- 657

Query: 389  AQSSLLEKENGSSWGNVSDSMKFHDGCKSLVELDLP-----LSQDSFEVFSPMGLDANMS 225
              SS+     GSS   V D  + H    S +E +L      ++++S    +   +D N S
Sbjct: 658  -SSSIPTSSEGSSNSIVGDEAQMHISSLSSIETELSSSSIMINEESTIRNADSVVDENHS 716

Query: 224  EQGGPVRRHTQL--SKGHANDDDRKLS 150
            E   P    T +  S  + N D  +L+
Sbjct: 717  ESKLPTEAKTSIVGSIDNENIDSTELN 743


>sp|Q961D9|BCL9_DROME Protein BCL9 homolog OS=Drosophila
           melanogaster GN=lgs PE=1 SV=1
          Length = 1469

 Score = 30.8 bits (68), Expect = 4.3
 Identities = 14/50 (28%), Positives = 29/50 (58%)
 Frame = +1

Query: 205 LTGPPCSDMFASRPIGEKTSKLSWDSGRSSSTKLLQPS*NFIESLTLPQE 354
           ++ P  S +  S P+G +T  + W+ G S++++  Q S N ++S++   E
Sbjct: 429 VSAPSNSFVDQSDPMGNETELMCWEGGSSNTSRSGQNSRNHVDSISTSSE 478


>sp|O31976|YOMI_BACSU SPBc2 prophage-derived uncharacterized
            transglycosylase yomI OS=Bacillus subtilis GN=yomI PE=3
            SV=1
          Length = 2285

 Score = 30.0 bits (66), Expect = 7.3
 Identities = 31/137 (22%), Positives = 56/137 (40%), Gaps = 6/137 (4%)
 Frame = -2

Query: 446  QKVNWQQPIIKIDCSSIDSAQSSLLEKENGSSWGNVSDSMKFHDGCKSLVELDLPLSQDS 267
            QKVNW Q  IK +  +++SAQ + L++E                      +LDL   QD 
Sbjct: 1783 QKVNWIQKEIKTN-KALNSAQRAQLQEE------------------LKQAKLDLISVQDQ 1823

Query: 266  FEVFSPMGLDANMSEQGGPVRRHTQLSKGHANDDDRKLSLC------LSVNTRRDCAIQE 105
                    + + + E    + + +  ++G   D D K+S+       +   +++   IQ+
Sbjct: 1824 VRELQKQLVQSKVDETLKSIEKSSSKTQGKIKDVDNKISMTEEDEDKVKYYSKQIKLIQQ 1883

Query: 104  GLFETSRYIIDTEDLDK 54
               E  +YI   E+  K
Sbjct: 1884 QQKEAKKYIKQLEEQKK 1900


>sp|Q0GNC1|INF2_MOUSE Inverted formin-2 OS=Mus musculus GN=Inf2 PE=1
           SV=1
          Length = 1273

 Score = 30.0 bits (66), Expect = 7.3
 Identities = 20/53 (37%), Positives = 29/53 (54%)
 Frame = -2

Query: 527 SVQTDLEVEEEGSSSLWSDTELYNSIPQKVNWQQPIIKIDCSSIDSAQSSLLE 369
           SVQT+  V+ +GSSS  + T        KV  QQP++   C  + S QSS ++
Sbjct: 359 SVQTN-SVQNQGSSSQNTTTPT-----TKVEGQQPVVASPCQHVGSIQSSSVD 405


>sp|Q5BK67|TIFAB_RAT TRAF-interacting protein with FHA
           domain-containing protein B OS=Rattus norvegicus
           GN=Tifab PE=2 SV=1
          Length = 147

 Score = 29.6 bits (65), Expect = 9.5
 Identities = 18/72 (25%), Positives = 30/72 (41%)
 Frame = -2

Query: 314 GCKSLVELDLPLSQDSFEVFSPMGLDANMSEQGGPVRRHTQLSKGHANDDDRKLSLCLSV 135
           G  +  ++ L L  D+  +    G D ++  Q   + RH    + +       L+ CL V
Sbjct: 18  GPVAFAKVPLQLQHDASRLLVGRGQDTHLQLQLPQLSRHHLCLEPYLEKGSNLLAFCLKV 77

Query: 134 NTRRDCAIQEGL 99
            TR+ C    GL
Sbjct: 78  LTRQSCVWVNGL 89
tr_hit_id B0W1X3
Definition tr|B0W1X3|B0W1X3_CULQU Cytochrome P450 18a1 OS=Culex quinquefasciatus
Align length 47
Score (bit) 33.9
E-value 5.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919394|Adiantum capillus-veneris mRNA, clone:
YMU001_000124_F04.
         (534 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B0W1X3|B0W1X3_CULQU Cytochrome P450 18a1 OS=Culex quinquefasc...    34   5.4  
tr|A2FKW1|A2FKW1_TRIVA SRP, putative (Fragment) OS=Trichomonas v...    34   5.4  
tr|A6FFP6|A6FFP6_9GAMM Lipoprotein, putative OS=Moritella sp. PE...    33   7.0  
tr|A8WS45|A8WS45_CAEBR Putative uncharacterized protein OS=Caeno...    33   7.0  
tr|Q4P4A2|Q4P4A2_USTMA Putative uncharacterized protein OS=Ustil...    33   9.2  
tr|A0E8Q5|A0E8Q5_PARTE Chromosome undetermined scaffold_83, whol...    33   9.3  

>tr|B0W1X3|B0W1X3_CULQU Cytochrome P450 18a1 OS=Culex
           quinquefasciatus GN=CpipJ_CPIJ001038 PE=3 SV=1
          Length = 533

 Score = 33.9 bits (76), Expect = 5.4
 Identities = 17/47 (36%), Positives = 26/47 (55%)
 Frame = -3

Query: 343 MSVTR*SFMMAAKA*LNLICHYPRIVLKFFLQWVWMQTCQSKEVPLG 203
           +SV R  F+ A+KA   L+     + +  FLQW++   CQ K +P G
Sbjct: 8   LSVVRQEFLDASKARSTLLVFCCALAVVLFLQWLFRLVCQIKSLPPG 54


>tr|A2FKW1|A2FKW1_TRIVA SRP, putative (Fragment) OS=Trichomonas
           vaginalis G3 GN=TVAG_327880 PE=4 SV=1
          Length = 753

 Score = 33.9 bits (76), Expect = 5.4
 Identities = 33/119 (27%), Positives = 48/119 (40%)
 Frame = -2

Query: 530 SSVQTDLEVEEEGSSSLWSDTELYNSIPQKVNWQQPIIKIDCSSIDSAQSSLLEKENGSS 351
           SS+Q      ++G+SSL  D    N     +N     +  D SS+    SSL   ++ SS
Sbjct: 84  SSLQQSASSLDQGASSLDQDASSLNQSASSLNQSASSLDQDASSLHQGASSL--DQDASS 141

Query: 350 WGNVSDSMKFHDGCKSLVELDLPLSQDSFEVFSPMGLDANMSEQGGPVRRHTQLSKGHA 174
               + S+  H G  SL +    L Q +    S +   A+   QG     H   S  HA
Sbjct: 142 LNQSASSL--HQGASSLHQGASSLDQGA----SSLDQGASSLHQGASSLHHAASSLHHA 194


>tr|A6FFP6|A6FFP6_9GAMM Lipoprotein, putative OS=Moritella sp. PE36
           GN=PE36_10523 PE=4 SV=1
          Length = 326

 Score = 33.5 bits (75), Expect = 7.0
 Identities = 25/86 (29%), Positives = 47/86 (54%), Gaps = 13/86 (15%)
 Frame = -2

Query: 506 VEEEGSSSLWSDTELY----NSIPQKVNWQQPIIKIDCSSIDSAQSSLLEKENGSSWG-- 345
           +  +GS + W D E Y    +S+  K++  +P++K+D +S   A ++L    + ++WG  
Sbjct: 112 LHSDGSVTTWGD-ERYGGDSSSVSDKLDGSKPVVKVDSTSY--AFAALHSDGSVTTWGHS 168

Query: 344 -------NVSDSMKFHDGCKSLVELD 288
                  +VSD +   DG KS+V++D
Sbjct: 169 SYGGDSSSVSDKL---DGSKSVVKVD 191


>tr|A8WS45|A8WS45_CAEBR Putative uncharacterized protein
            OS=Caenorhabditis briggsae GN=CBG02178 PE=4 SV=2
          Length = 2314

 Score = 33.5 bits (75), Expect = 7.0
 Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 9/81 (11%)
 Frame = -2

Query: 509  EVEEEGS----SSLWSDTELYNSIPQKVNWQQPIIKIDCSSIDSAQSSLLEKENGSSWGN 342
            ++ +EGS    S +  D E  + +P+KVN QQP   +   SI+   +S ++ E  S+  N
Sbjct: 1935 DMYDEGSLRKQSHMSEDVEERSEVPEKVNDQQPPTVL-TDSIEELSTSQIKSETNSTAPN 1993

Query: 341  VSDS-----MKFHDGCKSLVE 294
             ++S     + F D C S +E
Sbjct: 1994 STNSATEVFLNFEDLCVSYLE 2014


>tr|Q4P4A2|Q4P4A2_USTMA Putative uncharacterized protein OS=Ustilago
           maydis GN=UM05061.1 PE=4 SV=1
          Length = 520

 Score = 33.1 bits (74), Expect = 9.2
 Identities = 25/109 (22%), Positives = 55/109 (50%), Gaps = 3/109 (2%)
 Frame = -2

Query: 527 SVQTDLEVEEEGSSSLWSDTELYNSIPQKVNWQQPIIKIDCSSIDSAQSSLLEKENGSSW 348
           S +T +    E  +SL  + EL  +   ++ +   +++ID +  + + +S     +GS  
Sbjct: 178 SERTGIVSSHELMASL--ERELLEAENAEIVYDTKVVRIDPNQAERSAASSKRGSDGSQD 235

Query: 347 GNVSDSMKFHDGCKSLVELDLPLSQ---DSFEVFSPMGLDANMSEQGGP 210
           G +  ++     C S  ++D  L++   ++  + +PM L++ +SE GGP
Sbjct: 236 GWIVQTLTSESSCSSSSDVDALLAKVVINASGLNAPMVLNSLLSELGGP 284


>tr|A0E8Q5|A0E8Q5_PARTE Chromosome undetermined scaffold_83, whole
            genome shotgun sequence OS=Paramecium tetraurelia
            GN=GSPATT00024401001 PE=4 SV=1
          Length = 2921

 Score = 33.1 bits (74), Expect = 9.3
 Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
 Frame = +1

Query: 346  PQEDPFSFSSKEDCAESIEEQSIFIIGCCQ---LTFCGIELYSSVSLHKEEL 492
            PQ    S+   E   E ++E SI I GC     + F G++L+ + S +K+EL
Sbjct: 2074 PQNCSLSYQFPESYVEFLDELSISITGCRDANPILFYGVQLFPNQSTYKQEL 2125