BP919399 [AcEST]

BP919399
Clone id	YMU001_000124_F09
Library	YMU01
Length	529
Definition	Adiantum capillus-veneris mRNA. clone: YMU001_000124_F09.
Accession	BP919399
Tissue type	prothallium
Developmental stage	-
Contig ID	-
Sequence	TTTTTTTTTTTTTCAGAGTTTTGATCTTAAGACTTGTCTCGTCTACCAATCATTCTCCAA ATCCTAATCTAAATCTACAATCCTACAGTCCTAAAGGTACTCGGCAAGTATGATTACTTC CAAGCTACCTTTACACATCAAAAGACGTCAATCTTAAGCTATACGGTTTCTAAAAGAGAG TTTTGAACTCTAGGCGAACCTAGAGGAGGTTAAAGGACAATTACACAAGACGCTCGTGTT TTTCCCTATTTTAGGTCTCTTCGATCCCCGACAACGGCACCAAATGTGGGACGCATGTCT AACCTCACCATCATATCTTATTGCAGTATTAGCGAGAACCACAATTAATTTGTCAAACCA TGGGACGAAGCTGACTGGGCTAGTTCATAGAGGCTACAAGAGGTTGTCAATCTCTTGGAA AACAACTAACAACTTGCATCTATCTCAAGCTACACTCAAGTGACTGAAATCACCAAAAGC CAATCGCTCATCGGTAAGCAAATCACATCCATTACAGCATCAAATGACA
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	P46840
Definition	sp\|P46840\|CTPB_MYCLE Cation-transporting P-type ATPase B OS=Mycobacterium leprae
Align length	77
Score (bit)	30.0
E-value	6.8
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP919399\|Adiantum capillus-veneris mRNA, clone: YMU001_000124_F09. (516 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp\|P46840\|CTPB_MYCLE Cation-transporting P-type ATPase B OS=Myco... 30 6.8 >sp\|P46840\|CTPB_MYCLE Cation-transporting P-type ATPase B OS=Mycobacterium leprae GN=ctpB PE=3 SV=2 Length = 750 Score = 30.0 bits (66), Expect = 6.8 Identities = 22/77 (28%), Positives = 30/77 (38%), Gaps = 11/77 (14%) Frame = +1 Query: 250 DPRQRHQMWDACLTSPSYLIAVLARTTINL-----------SNHGTKLTGLVHRGYKRLS 396 +PRQ H +W A L S S V A T+ + S G+ L L RG K + Sbjct: 190 EPRQTHGIWQAILHSDSIYFEVAAGVTVFVLAGRFFEARAKSKAGSALRALAARGAKNVE 249 Query: 397 ISWKTTNNLHLSQATLK 447 + L + LK Sbjct: 250 VLLPNGAELTIPAGELK 266
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	A3LY50
Definition	tr\|A3LY50\|A3LY50_PICST Predicted protein (Fragment) OS=Pichia stipitis
Align length	83
Score (bit)	33.5
E-value	6.4
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP919399\|Adiantum capillus-veneris mRNA, clone: YMU001_000124_F09. (516 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr\|A3LY50\|A3LY50_PICST Predicted protein (Fragment) OS=Pichia st... 33 6.4 >tr\|A3LY50\|A3LY50_PICST Predicted protein (Fragment) OS=Pichia stipitis GN=PICST_22975 PE=4 SV=2 Length = 121 Score = 33.5 bits (75), Expect = 6.4 Identities = 23/83 (27%), Positives = 41/83 (49%) Frame = -2 Query: 404 QEIDNLLPLTSPVSFVPWFDKLIVVLANTAIRYDGEVRHASHIWCRCRGSKRPKIGKN 225 ++I+NLL + PVS D ++ L + Y ++ H++ + R +G R K+ Sbjct: 11 KDIENLLFAMGDRPVST----DMSVLALEEILVEYLSDLCHSTMAYSRSQGRSRIKMNDL 66 Query: 224 TSVLCNCPLTSSRFA*SSKLSFR 156 L N PL +RF + + S+R Sbjct: 67 AFALRNDPLKLARFQYTIEQSYR 89