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NBDC - LSDB Archive
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BP919407
Clone id YMU001_000124_G05
Library
Length 499
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000124_G05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
ATATTGAGATTAGTTTGAGTTAAAATCCATTTTAAGCTCTTGTGGTCTGTAACCAGCTGA
AACTTGCGTCCGAGAAGATAATGTCTCCATAACTTGAGCGCATGAATAACTGCTAAAAGT
TCCAAATCATGAGTAGGATAATTCTTCTCATGATCTCTCAGCTTTCGCGAAGTATATGCC
ACTGGTCTTCCTGCTTGAGTAAGAACTCCGCCTAGAGCAAATTTGCTAGCATCGATTGCT
ACTTCAGATTCCTTACTGAAATCTGGAAGCTTTAAAATAGGAGCTTAGACCAAGAACTCT
TTTAGTTTAGCAAGGCTAGACTCGTGCTCGGTCTTCCATTCGATCCTCATTCCTTTCTTC
AGGAGTTCCGTCAAAGGTGCAGCAATACGTGCATAATCCTTGACAAAAATCATGTACCAC
CCCGTTATCCCAAGAAATCCTCTGACTTCGCTGACGGTAGATGGTTGAGGCCAATCAACG
ATGTCCTTAACTTTATCTG
■■Homology search results ■■ -
sp_hit_id P20825
Definition sp|P20825|POL2_DROME Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster
Align length 158
Score (bit) 153.0
E-value 4.0e-37
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919407|Adiantum capillus-veneris mRNA, clone:
YMU001_000124_G05.
         (499 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P20825|POL2_DROME Retrovirus-related Pol polyprotein from tra...   153   4e-37
sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from tra...   150   2e-36
sp|P10401|POLY_DROME Retrovirus-related Pol polyprotein from tra...   122   1e-27
sp|Q8I7P9|POL5_DROME Retrovirus-related Pol polyprotein from tra...   106   5e-23
sp|Q9UR07|RTF23_SCHPO Retrotransposable element Tf2 155 kDa prot...   106   7e-23
sp|Q9C0R2|RTF22_SCHPO Retrotransposable element Tf2 155 kDa prot...   106   7e-23
sp|Q05654|RTF21_SCHPO Retrotransposable element Tf2 155 kDa prot...   106   7e-23
sp|P10394|POL4_DROME Retrovirus-related Pol polyprotein from tra...   103   4e-22
sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein OS=Sa...    89   1e-17
sp|Q7LHG5|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein OS=Sa...    88   2e-17
sp|P31792|POL_FENV1 Pol polyprotein (Fragment) OS=Feline endogen...    86   7e-17
sp|P21414|POL_GALV Pol polyprotein OS=Gibbon ape leukemia virus ...    84   4e-16
sp|Q9TTC1|POL_KORV Pro-Pol polyprotein OS=Koala retrovirus GN=pr...    84   5e-16
sp|P10272|POL_BAEVM Pol polyprotein OS=Baboon endogenous virus (...    82   1e-15
sp|P26809|POL_MLVFF Pol polyprotein OS=Friend murine leukemia vi...    78   3e-14
sp|P03356|POL_MLVAV Pol polyprotein OS=AKV murine leukemia virus...    77   6e-14
sp|P26808|POL_MLVFP Pol polyprotein OS=Friend murine leukemia vi...    76   7e-14
sp|P03355|POL_MLVMO Pol polyprotein OS=Moloney murine leukemia v...    76   1e-13
sp|P11227|POL_MLVRD Pol polyprotein OS=Radiation murine leukemia...    75   2e-13
sp|P26810|POL_MLVF5 Pol polyprotein OS=Friend murine leukemia vi...    75   2e-13
sp|P92523|M860_ARATH Uncharacterized mitochondrial protein AtMg0...    73   8e-13
sp|P05400|POL_CERV Enzymatic polyprotein OS=Carnation etched rin...    61   3e-09
sp|P09523|POL_FMVD Enzymatic polyprotein OS=Figwort mosaic virus...    60   6e-09
sp|P03556|POL_CAMVD Enzymatic polyprotein OS=Cauliflower mosaic ...    56   1e-07
sp|P03554|POL_CAMVS Enzymatic polyprotein OS=Cauliflower mosaic ...    55   1e-07
sp|Q02964|POL_CAMVE Enzymatic polyprotein OS=Cauliflower mosaic ...    55   2e-07
sp|P03555|POL_CAMVC Enzymatic polyprotein OS=Cauliflower mosaic ...    55   2e-07
sp|Q00962|POL_CAMVN Enzymatic polyprotein OS=Cauliflower mosaic ...    54   4e-07
sp|Q9P2P1|K1305_HUMAN Integrase catalytic domain-containing prot...    54   5e-07
sp|Q5DTZ0|K1305_MOUSE Integrase catalytic domain-containing prot...    51   3e-06

>sp|P20825|POL2_DROME Retrovirus-related Pol polyprotein from
           transposon 297 OS=Drosophila melanogaster GN=pol PE=4
           SV=1
          Length = 1059

 Score =  153 bits (387), Expect = 4e-37
 Identities = 76/158 (48%), Positives = 107/158 (67%), Gaps = 1/158 (0%)
 Frame = -3

Query: 494 KVKDIVDWPQPSTVSEVRGFLGITGWYMIFVKDYARIAAPLTELLKKGMRIEW-KTEHES 318
           KVK IV +P P+   E+R FLG+TG+Y  F+ +YA IA P+T  LKK  +I+  K E+  
Sbjct: 425 KVKAIVSYPIPTKDKEIRAFLGLTGYYRKFIPNYADIAKPMTSCLKKRTKIDTQKLEYIE 484

Query: 317 SLAKLKEFLV*APILKLPDFSKESEVAIDASKFALGGVLTQAGRPVAYTSRKLRDHEKNY 138
           +  KLK  ++  PIL+LPDF K+  +  DAS  ALG VL+Q G P+++ SR L DHE NY
Sbjct: 485 AFEKLKALIIRDPILQLPDFEKKFVLTTDASNLALGAVLSQNGHPISFISRTLNDHELNY 544

Query: 137 PTHDLELLAVIHALKLWRHYLLGRKFQLVTDHKSLKWI 24
              + ELLA++ A K +RHYLLGR+F + +DH+ L+W+
Sbjct: 545 SAIEKELLAIVWATKTFRHYLLGRQFLIASDHQPLRWL 582


>sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from
           transposon 17.6 OS=Drosophila melanogaster GN=pol PE=4
           SV=1
          Length = 1058

 Score =  150 bits (380), Expect = 2e-36
 Identities = 74/166 (44%), Positives = 112/166 (67%), Gaps = 1/166 (0%)
 Frame = -3

Query: 497 DKVKDIVDWPQPSTVSEVRGFLGITGWYMIFVKDYARIAAPLTELLKKGMRIEWKT-EHE 321
           +K++ I  +P P+   E++ FLG+TG+Y  F+ ++A IA P+T+ LKK M+I+    E++
Sbjct: 425 EKIEAIQKYPIPTKPKEIKAFLGLTGYYRKFIPNFADIAKPMTKCLKKNMKIDTTNPEYD 484

Query: 320 SSLAKLKEFLV*APILKLPDFSKESEVAIDASKFALGGVLTQAGRPVAYTSRKLRDHEKN 141
           S+  KLK  +   PILK+PDF+K+  +  DAS  ALG VL+Q G P++Y SR L +HE N
Sbjct: 485 SAFKKLKYLISEDPILKVPDFTKKFTLTTDASDVALGAVLSQDGHPLSYISRTLNEHEIN 544

Query: 140 YPTHDLELLAVIHALKLWRHYLLGRKFQLVTDHKSLKWILTQTNLN 3
           Y T + ELLA++ A K +RHYLLGR F++ +DH+ L W+    + N
Sbjct: 545 YSTIEKELLAIVWATKTFRHYLLGRHFEISSDHQPLSWLYRMKDPN 590


>sp|P10401|POLY_DROME Retrovirus-related Pol polyprotein from
           transposon gypsy OS=Drosophila melanogaster GN=pol PE=4
           SV=1
          Length = 1035

 Score =  122 bits (305), Expect = 1e-27
 Identities = 66/178 (37%), Positives = 105/178 (58%), Gaps = 13/178 (7%)
 Frame = -3

Query: 497 DKVKDIVDWPQPSTVSEVRGFLGITGWYMIFVKDYARIAAPLTELLK-----------KG 351
           +KVK I ++P+P  V +VR FLG+  +Y +F+KD+A IA P+T++LK           K 
Sbjct: 400 EKVKAIQEYPEPDCVYKVRSFLGLASYYRVFIKDFAAIARPITDILKGENGSVSKHMSKK 459

Query: 350 MRIEWKTEHESSLAKLKEFLV*AP-ILKLPDFSKESEVAIDASKFALGGVLTQAGRPVAY 174
           + +E+     ++  +L+  L     ILK PDF K  ++  DAS   +G VL+Q GRP+  
Sbjct: 460 IPVEFNETQRNAFQRLRNILASEDVILKYPDFKKPFDLTTDASASGIGAVLSQEGRPITM 519

Query: 173 TSRKLRDHEKNYPTHDLELLAVIHALKLWRHYLLG-RKFQLVTDHKSLKWILTQTNLN 3
            SR L+  E+NY T++ ELLA++ AL   +++L G R+  + TDH+ L + +   N N
Sbjct: 520 ISRTLKQPEQNYATNERELLAIVWALGKLQNFLYGSREINIFTDHQPLTFAVADRNTN 577


>sp|Q8I7P9|POL5_DROME Retrovirus-related Pol polyprotein from
           transposon opus OS=Drosophila melanogaster GN=pol PE=4
           SV=1
          Length = 1003

 Score =  106 bits (265), Expect = 5e-23
 Identities = 68/181 (37%), Positives = 99/181 (54%), Gaps = 17/181 (9%)
 Frame = -3

Query: 494 KVKDIVDWPQPSTVSEVRGFLGITGWYMIFVKDYARIAAPLTELLKKGMRIEWKTEHES- 318
           KV+ I + P P++V E++ FLG+T +Y  F++DYA++A PLT  L +G+    K+   S 
Sbjct: 342 KVRAISEMPPPTSVKELKRFLGMTSYYRKFIQDYAKVAKPLTN-LTRGLYANIKSSQSSK 400

Query: 317 -----------SLAKLKEFLV*APILKLPDFSKESEVAIDASKFALGGVLTQ----AGRP 183
                      S   LK  L  + IL  P F+K   +  DAS +A+G VL+Q      RP
Sbjct: 401 VPITLDETALQSFNDLKSILCSSEILAFPCFTKPFHLTTDASNWAIGAVLSQDDQGRDRP 460

Query: 182 VAYTSRKLRDHEKNYPTHDLELLAVIHALKLWRHYLLGR-KFQLVTDHKSLKWILTQTNL 6
           +AY SR L   E+NY T + E+LA+I +L   R YL G    ++ TDH+ L + L   N 
Sbjct: 461 IAYISRSLNKTEENYATIEKEMLAIIWSLDNLRAYLYGAGTIKVYTDHQPLTFALGNRNF 520

Query: 5   N 3
           N
Sbjct: 521 N 521


>sp|Q9UR07|RTF23_SCHPO Retrotransposable element Tf2 155 kDa protein
            type 3 OS=Schizosaccharomyces pombe GN=Tf2-11 PE=4 SV=1
          Length = 1333

 Score =  106 bits (264), Expect = 7e-23
 Identities = 58/162 (35%), Positives = 90/162 (55%), Gaps = 7/162 (4%)
 Frame = -3

Query: 497  DKVKDIVDWPQPSTVSEVRGFLGITGWYMIFVKDYARIAAPLTELLKKGMRIEWKTEHES 318
            + +  ++ W QP    E+R FLG   +   F+   +++  PL  LLKK +R +W      
Sbjct: 625  ENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQ 684

Query: 317  SLAKLKEFLV*APILKLPDFSKESEVAIDASKFALGGVLTQAG-----RPVAYTSRKLRD 153
            ++  +K+ LV  P+L+  DFSK+  +  DAS  A+G VL+Q        PV Y S K+  
Sbjct: 685  AIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSK 744

Query: 152  HEKNYPTHDLELLAVIHALKLWRHYLLG--RKFQLVTDHKSL 33
             + NY   D E+LA+I +LK WRHYL      F+++TDH++L
Sbjct: 745  AQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNL 786


>sp|Q9C0R2|RTF22_SCHPO Retrotransposable element Tf2 155 kDa protein
            type 2 OS=Schizosaccharomyces pombe GN=Tf2-7 PE=2 SV=1
          Length = 1333

 Score =  106 bits (264), Expect = 7e-23
 Identities = 58/162 (35%), Positives = 90/162 (55%), Gaps = 7/162 (4%)
 Frame = -3

Query: 497  DKVKDIVDWPQPSTVSEVRGFLGITGWYMIFVKDYARIAAPLTELLKKGMRIEWKTEHES 318
            + +  ++ W QP    E+R FLG   +   F+   +++  PL  LLKK +R +W      
Sbjct: 625  ENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQ 684

Query: 317  SLAKLKEFLV*APILKLPDFSKESEVAIDASKFALGGVLTQAG-----RPVAYTSRKLRD 153
            ++  +K+ LV  P+L+  DFSK+  +  DAS  A+G VL+Q        PV Y S K+  
Sbjct: 685  AIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSK 744

Query: 152  HEKNYPTHDLELLAVIHALKLWRHYLLG--RKFQLVTDHKSL 33
             + NY   D E+LA+I +LK WRHYL      F+++TDH++L
Sbjct: 745  AQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNL 786


>sp|Q05654|RTF21_SCHPO Retrotransposable element Tf2 155 kDa protein
            type 1 OS=Schizosaccharomyces pombe GN=Tf2-1 PE=2 SV=1
          Length = 1333

 Score =  106 bits (264), Expect = 7e-23
 Identities = 58/162 (35%), Positives = 90/162 (55%), Gaps = 7/162 (4%)
 Frame = -3

Query: 497  DKVKDIVDWPQPSTVSEVRGFLGITGWYMIFVKDYARIAAPLTELLKKGMRIEWKTEHES 318
            + +  ++ W QP    E+R FLG   +   F+   +++  PL  LLKK +R +W      
Sbjct: 625  ENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQ 684

Query: 317  SLAKLKEFLV*APILKLPDFSKESEVAIDASKFALGGVLTQAG-----RPVAYTSRKLRD 153
            ++  +K+ LV  P+L+  DFSK+  +  DAS  A+G VL+Q        PV Y S K+  
Sbjct: 685  AIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSK 744

Query: 152  HEKNYPTHDLELLAVIHALKLWRHYLLG--RKFQLVTDHKSL 33
             + NY   D E+LA+I +LK WRHYL      F+++TDH++L
Sbjct: 745  AQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNL 786


>sp|P10394|POL4_DROME Retrovirus-related Pol polyprotein from
            transposon 412 OS=Drosophila melanogaster GN=POL PE=4
            SV=1
          Length = 1237

 Score =  103 bits (257), Expect = 4e-22
 Identities = 60/168 (35%), Positives = 89/168 (52%), Gaps = 5/168 (2%)
 Frame = -3

Query: 497  DKVKDIV-DWPQPSTVSEVRGFLGITGWYMIFVKDYARIAAPLTELLKKGMRIEWKTEHE 321
            DK  D++ ++P P      R F+    +Y  F+K++A  +  +T L KK +  EW  E +
Sbjct: 532  DKKYDVIQNYPVPHDADSARRFVAFCNYYRRFIKNFADYSRHITRLCKKNVPFEWTDECQ 591

Query: 320  SSLAKLKEFLV*APILKLPDFSKESEVAIDASKFALGGVLTQAGR----PVAYTSRKLRD 153
             +   LK  L+   +L+ PDFSKE  +  DASK A G VLTQ       PVAY SR    
Sbjct: 592  KAFIHLKSQLINPTLLQYPDFSKEFCITTDASKQACGAVLTQNHNGHQLPVAYASRAFTK 651

Query: 152  HEKNYPTHDLELLAVIHALKLWRHYLLGRKFQLVTDHKSLKWILTQTN 9
             E N  T + EL A+  A+  +R Y+ G+ F + TDH+ L ++ +  N
Sbjct: 652  GESNKSTTEQELAAIHWAIIHFRPYIYGKHFTVKTDHRPLTYLFSMVN 699


>sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein
            OS=Saccharomyces cerevisiae GN=TY3B-G PE=1 SV=3
          Length = 1547

 Score = 89.0 bits (219), Expect = 1e-17
 Identities = 54/160 (33%), Positives = 85/160 (53%), Gaps = 6/160 (3%)
 Frame = -3

Query: 494  KVKDIVDWPQPSTVSEVRGFLGITGWYMIFVKDYARIAAPLTELLKKGMRIEWKTEHESS 315
            K   I D+P P TV + + FLG+  +Y  F+ + ++IA P+   +    + +W  + + +
Sbjct: 808  KCAAIRDFPTPKTVKQAQRFLGMINYYRRFIPNCSKIAQPIQLFICD--KSQWTEKQDKA 865

Query: 314  LAKLKEFLV*APILKLPDFSKESEVAIDASKFALGGVLTQAGRP------VAYTSRKLRD 153
            + KLK+ L  +P+L   +      +  DASK  +G VL +          V Y S+ L  
Sbjct: 866  IDKLKDALCNSPVLVPFNNKANYRLTTDASKDGIGAVLEEVDNKNKLVGVVGYFSKSLES 925

Query: 152  HEKNYPTHDLELLAVIHALKLWRHYLLGRKFQLVTDHKSL 33
             +KNYP  +LELL +I AL  +R+ L G+ F L TDH SL
Sbjct: 926  AQKNYPAGELELLGIIKALHHFRYMLHGKHFTLRTDHISL 965


>sp|Q7LHG5|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein
            OS=Saccharomyces cerevisiae GN=TY3B-I PE=3 SV=2
          Length = 1498

 Score = 88.2 bits (217), Expect = 2e-17
 Identities = 54/160 (33%), Positives = 84/160 (52%), Gaps = 6/160 (3%)
 Frame = -3

Query: 494  KVKDIVDWPQPSTVSEVRGFLGITGWYMIFVKDYARIAAPLTELLKKGMRIEWKTEHESS 315
            K   I D+P P TV + + FLG+  +Y  F+ + ++IA P+   +    + +W  + + +
Sbjct: 834  KCAAIRDFPTPKTVKQAQRFLGMINYYRRFIPNCSKIAQPIQLFICD--KSQWTEKQDKA 891

Query: 314  LAKLKEFLV*APILKLPDFSKESEVAIDASKFALGGVLTQAGRP------VAYTSRKLRD 153
            + KLK  L  +P+L   +      +  DASK  +G VL +          V Y S+ L  
Sbjct: 892  IEKLKAALCNSPVLVPFNNKANYRLTTDASKDGIGAVLEEVDNKNKLVGVVGYFSKSLES 951

Query: 152  HEKNYPTHDLELLAVIHALKLWRHYLLGRKFQLVTDHKSL 33
             +KNYP  +LELL +I AL  +R+ L G+ F L TDH SL
Sbjct: 952  AQKNYPAGELELLGIIKALHHFRYMLHGKHFTLRTDHISL 991
tr_hit_id Q7Y0A9
Definition tr|Q7Y0A9|Q7Y0A9_ORYSJ Putative polyprotein (Retrotransposon protein, putative, Ty3-gypsy subclass) OS=Oryza sativa subsp. japonica
Align length 163
Score (bit) 194.0
E-value 2.0e-48
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919407|Adiantum capillus-veneris mRNA, clone:
YMU001_000124_G05.
         (499 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q7Y0A9|Q7Y0A9_ORYSJ Putative polyprotein (Retrotransposon pro...   194   2e-48
tr|Q851D3|Q851D3_ORYSJ Putative polyprotein (Retrotransposon pro...   193   3e-48
tr|Q75IG7|Q75IG7_ORYSJ Putative polyprotein OS=Oryza sativa subs...   193   3e-48
tr|Q2QLW8|Q2QLW8_ORYSJ Retrotransposon protein, putative, Ty3-gy...   193   3e-48
tr|Q6AU11|Q6AU11_ORYSJ Putative retrotransposon protein, 5'-part...   192   7e-48
tr|Q6ATV9|Q6ATV9_ORYSJ Putative retrotransposon protein (Retrotr...   192   7e-48
tr|Q53KP3|Q53KP3_ORYSJ Retrotransposon protein, putative, Ty3-gy...   192   7e-48
tr|Q7X891|Q7X891_ORYSJ OSJNBb0016B03.11 protein OS=Oryza sativa ...   192   1e-47
tr|Q7X7N7|Q7X7N7_ORYSJ OSJNBa0093P23.4 protein (OSJNBa0041M21.9 ...   192   1e-47
tr|Q2QWQ0|Q2QWQ0_ORYSJ Retrotransposon protein, putative, Ty3-gy...   192   1e-47
tr|Q2QR29|Q2QR29_ORYSJ Retrotransposon protein, putative, Ty3-gy...   192   1e-47
tr|Q25AC4|Q25AC4_ORYSA H0522A01.6 protein (H0425E08.11 protein) ...   192   1e-47
tr|Q01MP6|Q01MP6_ORYSA H0820C10.2 protein OS=Oryza sativa GN=H08...   192   1e-47
tr|Q01LU8|Q01LU8_ORYSA OSIGBa0136B09.3 protein OS=Oryza sativa G...   192   1e-47
tr|Q01KH2|Q01KH2_ORYSA H0409D10.7 protein OS=Oryza sativa GN=H04...   192   1e-47
tr|Q01JD2|Q01JD2_ORYSA OSIGBa0130P02.7 protein OS=Oryza sativa G...   192   1e-47
tr|Q9XEM5|Q9XEM5_ORYSI Polyprotein OS=Oryza sativa subsp. indica...   191   1e-47
tr|Q8S782|Q8S782_ORYSA Putative retroelement OS=Oryza sativa GN=...   191   1e-47
tr|Q8H870|Q8H870_ORYSJ Putative polyprotein OS=Oryza sativa subs...   191   1e-47
tr|Q7XKZ2|Q7XKZ2_ORYSJ OSJNBa0022F16.12 protein OS=Oryza sativa ...   191   1e-47
tr|Q7XKP3|Q7XKP3_ORYSA OSJNBa0032N05.6 protein OS=Oryza sativa G...   191   1e-47
tr|Q7XFS6|Q7XFS6_ORYSJ Retrotransposon protein, putative, Ty3-gy...   191   1e-47
tr|Q60DH1|Q60DH1_ORYSJ Putative polyprotein OS=Oryza sativa subs...   191   1e-47
tr|Q5JQU7|Q5JQU7_ORYSA OSJNBa0061C06.18 protein OS=Oryza sativa ...   191   1e-47
tr|Q339T6|Q339T6_ORYSJ Retrotransposon protein, putative, Ty3-gy...   191   1e-47
tr|Q2QRA7|Q2QRA7_ORYSJ Retrotransposon protein, putative, Ty3-gy...   191   1e-47
tr|Q109Z2|Q109Z2_ORYSJ Retrotransposon protein, putative, Ty3-gy...   191   1e-47
tr|Q84SQ8|Q84SQ8_ORYSJ Putative gag-pol polyprotein (Retrotransp...   191   2e-47
tr|Q7XM76|Q7XM76_ORYSA OSJNBa0079C19.6 protein OS=Oryza sativa G...   191   2e-47
tr|Q7XK08|Q7XK08_ORYSJ OSJNBa0061C08.12 protein OS=Oryza sativa ...   191   2e-47

>tr|Q7Y0A9|Q7Y0A9_ORYSJ Putative polyprotein (Retrotransposon protein,
            putative, Ty3-gypsy subclass) OS=Oryza sativa subsp.
            japonica GN=OSJNBa0075A22.6 PE=4 SV=1
          Length = 1564

 Score =  194 bits (493), Expect = 2e-48
 Identities = 91/163 (55%), Positives = 121/163 (74%)
 Frame = -3

Query: 491  VKDIVDWPQPSTVSEVRGFLGITGWYMIFVKDYARIAAPLTELLKKGMRIEWKTEHESSL 312
            V+ + +W QP TVSE+R FLG+ G+Y  F++++++IA P+T LL+K ++ +W  E+E S 
Sbjct: 893  VESVTNWKQPKTVSEIRSFLGLAGYYRRFIENFSKIAKPMTRLLQKDVKYKWSEEYEQSF 952

Query: 311  AKLKEFLV*APILKLPDFSKESEVAIDASKFALGGVLTQAGRPVAYTSRKLRDHEKNYPT 132
             +LK  L+ APIL LPD  K  +V  DASK  LG VL Q G+ VAY SR+LR HEKNYPT
Sbjct: 953  QELKNRLILAPILILPDPKKSFQVYCDASKIGLGCVLMQDGKVVAYASRQLRPHEKNYPT 1012

Query: 131  HDLELLAVIHALKLWRHYLLGRKFQLVTDHKSLKWILTQTNLN 3
            HDLEL AV+HALK+WRHYL G + ++ TDHKSLK+I TQ +LN
Sbjct: 1013 HDLELTAVVHALKIWRHYLFGTRTEVYTDHKSLKYIFTQPDLN 1055


>tr|Q851D3|Q851D3_ORYSJ Putative polyprotein (Retrotransposon protein,
            putative, Ty3-gypsy subclass) OS=Oryza sativa subsp.
            japonica GN=OSJNBb0021P10.9 PE=4 SV=1
          Length = 1770

 Score =  193 bits (491), Expect = 3e-48
 Identities = 92/163 (56%), Positives = 122/163 (74%)
 Frame = -3

Query: 491  VKDIVDWPQPSTVSEVRGFLGITGWYMIFVKDYARIAAPLTELLKKGMRIEWKTEHESSL 312
            V+ + +W QP TVSE+R FLG+ G+Y  F++++++IA P+T LL+K ++ +W  E E S 
Sbjct: 1032 VESVTNWKQPKTVSEIRSFLGLAGYYRRFIENFSKIAKPMTRLLQKDVKYKWSEECEQSF 1091

Query: 311  AKLKEFLV*APILKLPDFSKESEVAIDASKFALGGVLTQAGRPVAYTSRKLRDHEKNYPT 132
             +LK+ L+ APIL LPD  K  +V  DASKF LG VL Q G+ VAY SR+LR HEKNYPT
Sbjct: 1092 QELKDRLISAPILILPDPKKGFQVYCDASKFGLGCVLMQDGKVVAYASRQLRPHEKNYPT 1151

Query: 131  HDLELLAVIHALKLWRHYLLGRKFQLVTDHKSLKWILTQTNLN 3
            HDLEL AV+HALK+WRHYL G + ++ TDHKSLK+I TQ +LN
Sbjct: 1152 HDLELDAVVHALKIWRHYLFGTRTEVYTDHKSLKYIFTQPDLN 1194


>tr|Q75IG7|Q75IG7_ORYSJ Putative polyprotein OS=Oryza sativa subsp.
            japonica GN=P0048F12.13 PE=4 SV=1
          Length = 1678

 Score =  193 bits (491), Expect = 3e-48
 Identities = 91/163 (55%), Positives = 121/163 (74%)
 Frame = -3

Query: 491  VKDIVDWPQPSTVSEVRGFLGITGWYMIFVKDYARIAAPLTELLKKGMRIEWKTEHESSL 312
            V+ + +W QP TVSE+R FLG+ G+Y  F++++++IA P+T LL+K ++ +W  E E S 
Sbjct: 956  VESVTNWKQPKTVSEIRSFLGLAGYYRRFIENFSKIAKPMTRLLQKDVKYKWSEECEQSF 1015

Query: 311  AKLKEFLV*APILKLPDFSKESEVAIDASKFALGGVLTQAGRPVAYTSRKLRDHEKNYPT 132
             +LK  L+ APIL LPD  K  +V  DASKF LG VL Q G+ VAY SR+LR HEKNYPT
Sbjct: 1016 QELKSRLISAPILILPDPKKGFQVYCDASKFGLGCVLMQEGKVVAYASRQLRPHEKNYPT 1075

Query: 131  HDLELLAVIHALKLWRHYLLGRKFQLVTDHKSLKWILTQTNLN 3
            HD+EL AV+HALK+WRHYL G + ++ TDHKSLK+I TQ +LN
Sbjct: 1076 HDIELAAVVHALKIWRHYLFGTRTEVYTDHKSLKYIFTQPDLN 1118


>tr|Q2QLW8|Q2QLW8_ORYSJ Retrotransposon protein, putative, Ty3-gypsy
            subclass OS=Oryza sativa subsp. japonica
            GN=LOC_Os12g43050 PE=4 SV=2
          Length = 1595

 Score =  193 bits (491), Expect = 3e-48
 Identities = 92/163 (56%), Positives = 121/163 (74%)
 Frame = -3

Query: 491  VKDIVDWPQPSTVSEVRGFLGITGWYMIFVKDYARIAAPLTELLKKGMRIEWKTEHESSL 312
            V+ + +W QP TVSE+R FLG+ G+Y  F++++++IA P+T LL+K ++ +W  E E S 
Sbjct: 924  VESVTNWKQPKTVSEIRSFLGLAGYYRRFIENFSKIAKPMTRLLQKDVKYKWSEECEQSF 983

Query: 311  AKLKEFLV*APILKLPDFSKESEVAIDASKFALGGVLTQAGRPVAYTSRKLRDHEKNYPT 132
             +LK  L+ APIL LPD  K  +V  DASK  LG VL Q G+ VAYTSR+LR HEKNYPT
Sbjct: 984  QELKSRLISAPILILPDPKKGFQVYCDASKLGLGCVLMQDGKVVAYTSRQLRPHEKNYPT 1043

Query: 131  HDLELLAVIHALKLWRHYLLGRKFQLVTDHKSLKWILTQTNLN 3
            HDLEL AV+HALK+WRHYL G + ++ TDHKSLK+I TQ +LN
Sbjct: 1044 HDLELAAVVHALKIWRHYLFGTRTEVYTDHKSLKYIFTQPDLN 1086


>tr|Q6AU11|Q6AU11_ORYSJ Putative retrotransposon protein, 5'-partial
            (Fragment) OS=Oryza sativa subsp. japonica
            GN=OSJNBb0096H12.28 PE=4 SV=1
          Length = 1633

 Score =  192 bits (488), Expect = 7e-48
 Identities = 91/163 (55%), Positives = 120/163 (73%)
 Frame = -3

Query: 491  VKDIVDWPQPSTVSEVRGFLGITGWYMIFVKDYARIAAPLTELLKKGMRIEWKTEHESSL 312
            V+ + +W QP TVSE+R FLG+ G+Y  F++++++IA P+T L +K ++ +W  E E S 
Sbjct: 588  VESVTNWKQPKTVSEIRSFLGLAGYYRRFIENFSKIAKPMTRLFQKDVKYKWSEECEQSF 647

Query: 311  AKLKEFLV*APILKLPDFSKESEVAIDASKFALGGVLTQAGRPVAYTSRKLRDHEKNYPT 132
             +LK  L+ APIL LPD  K  +V  DASKF LG VL Q G+ VAY SR+LR HEKNYPT
Sbjct: 648  QELKSRLISAPILILPDPKKGFQVYCDASKFGLGCVLMQDGKVVAYASRQLRPHEKNYPT 707

Query: 131  HDLELLAVIHALKLWRHYLLGRKFQLVTDHKSLKWILTQTNLN 3
            HDLEL AV+HALK+WRHYL G + ++ TDHKSLK+I TQ +LN
Sbjct: 708  HDLELAAVVHALKIWRHYLFGTRTEVYTDHKSLKYIFTQPDLN 750


>tr|Q6ATV9|Q6ATV9_ORYSJ Putative retrotransposon protein
            (Retrotransposon protein, putative, Ty3-gypsy subclass)
            OS=Oryza sativa subsp. japonica GN=OJ1285_H07.9 PE=4 SV=1
          Length = 2784

 Score =  192 bits (488), Expect = 7e-48
 Identities = 91/163 (55%), Positives = 120/163 (73%)
 Frame = -3

Query: 491  VKDIVDWPQPSTVSEVRGFLGITGWYMIFVKDYARIAAPLTELLKKGMRIEWKTEHESSL 312
            V+ + +W QP TVSE+R FLG+ G+Y  F++++++IA P+T L +K ++ +W  E E S 
Sbjct: 1739 VESVTNWKQPKTVSEIRSFLGLAGYYRRFIENFSKIAKPMTRLFQKDVKYKWSEECEQSF 1798

Query: 311  AKLKEFLV*APILKLPDFSKESEVAIDASKFALGGVLTQAGRPVAYTSRKLRDHEKNYPT 132
             +LK  L+ APIL LPD  K  +V  DASKF LG VL Q G+ VAY SR+LR HEKNYPT
Sbjct: 1799 QELKSRLISAPILILPDPKKGFQVYCDASKFGLGCVLMQDGKVVAYASRQLRPHEKNYPT 1858

Query: 131  HDLELLAVIHALKLWRHYLLGRKFQLVTDHKSLKWILTQTNLN 3
            HDLEL AV+HALK+WRHYL G + ++ TDHKSLK+I TQ +LN
Sbjct: 1859 HDLELAAVVHALKIWRHYLFGTRTEVYTDHKSLKYIFTQPDLN 1901



 Score = 57.4 bits (137), Expect = 4e-07
 Identities = 42/154 (27%), Positives = 66/154 (42%), Gaps = 4/154 (2%)
 Frame = -3

Query: 497  DKVKDIVDWPQPSTVSEVRGFLGITGWYMIFVKDYARIAAPLTELLKKGMRIEWKTEHES 318
            +K+K I +   P+ + EV+   G       FV        P   LLKK  +  W  E E 
Sbjct: 617  EKIKAIENMKSPTRLKEVQKLTGCMAALSRFVARMGERGQPFFTLLKKQDKFVWTQEAED 676

Query: 317  SLAKLKEFLV*APILKLPDFSKESEVAIDASKFALGGVL----TQAGRPVAYTSRKLRDH 150
            +   LK +L   P+L  P  ++E  + I A+ ++   ++     +  R V Y S  L D 
Sbjct: 677  AFIALKRYLSDPPVLVAPQPNEELFLYIAATPYSESTIIIVERAKVQRLVYYVSAALHDA 736

Query: 149  EKNYPTHDLELLAVIHALKLWRHYLLGRKFQLVT 48
            +  YP     L AVI   +  RHY    +  +V+
Sbjct: 737  KTRYPQIQKLLYAVIMTSRKLRHYFQAHRVTVVS 770


>tr|Q53KP3|Q53KP3_ORYSJ Retrotransposon protein, putative, Ty3-gypsy
            subclass OS=Oryza sativa subsp. japonica
            GN=LOC_Os11g15560 PE=4 SV=1
          Length = 1686

 Score =  192 bits (488), Expect = 7e-48
 Identities = 91/163 (55%), Positives = 120/163 (73%)
 Frame = -3

Query: 491  VKDIVDWPQPSTVSEVRGFLGITGWYMIFVKDYARIAAPLTELLKKGMRIEWKTEHESSL 312
            V+ + +W QP TVSE+R FLG+ G+Y  F++++++IA P+T LL+K ++ +W  E E S 
Sbjct: 1002 VESVTNWKQPKTVSEIRSFLGLAGYYRRFIENFSKIAKPMTRLLQKDVKYKWSEECEQSF 1061

Query: 311  AKLKEFLV*APILKLPDFSKESEVAIDASKFALGGVLTQAGRPVAYTSRKLRDHEKNYPT 132
             +LK  L+ APIL LPD  K  +V  DASK  LG VL Q G+ VAY SR+LR HEKNYPT
Sbjct: 1062 QELKNRLISAPILILPDPKKGFQVYCDASKLGLGCVLMQGGKVVAYASRQLRPHEKNYPT 1121

Query: 131  HDLELLAVIHALKLWRHYLLGRKFQLVTDHKSLKWILTQTNLN 3
            HDLEL AV+HALK+WRHYL G + ++ TDHKSLK+I TQ +LN
Sbjct: 1122 HDLELAAVVHALKIWRHYLFGTRTEVYTDHKSLKYIFTQPDLN 1164


>tr|Q7X891|Q7X891_ORYSJ OSJNBb0016B03.11 protein OS=Oryza sativa
            subsp. japonica GN=OSJNBb0016B03.11 PE=4 SV=2
          Length = 1374

 Score =  192 bits (487), Expect = 1e-47
 Identities = 92/163 (56%), Positives = 120/163 (73%)
 Frame = -3

Query: 491  VKDIVDWPQPSTVSEVRGFLGITGWYMIFVKDYARIAAPLTELLKKGMRIEWKTEHESSL 312
            V+ + +W QP TVSE+R FLG+ G+Y  F++++++IA P+T LL+K ++ +W  E E S 
Sbjct: 748  VESVTNWKQPKTVSEIRSFLGLAGYYRRFIENFSKIAKPMTRLLQKDVKYKWSEECEQSF 807

Query: 311  AKLKEFLV*APILKLPDFSKESEVAIDASKFALGGVLTQAGRPVAYTSRKLRDHEKNYPT 132
             +LK  LV APIL LPD  K  +V  DASK  LG VL Q G+ VAY SR+LR HEKNYPT
Sbjct: 808  QELKNRLVSAPILILPDPKKGFQVYCDASKLGLGCVLMQDGKVVAYASRQLRPHEKNYPT 867

Query: 131  HDLELLAVIHALKLWRHYLLGRKFQLVTDHKSLKWILTQTNLN 3
            HDLEL AV+HALK+WRHYL G + ++ TDHKSLK+I TQ +LN
Sbjct: 868  HDLELAAVVHALKIWRHYLFGTRTEVYTDHKSLKYIFTQPDLN 910


>tr|Q7X7N7|Q7X7N7_ORYSJ OSJNBa0093P23.4 protein (OSJNBa0041M21.9
            protein) OS=Oryza sativa subsp. japonica
            GN=OSJNBa0093P23.4 PE=4 SV=2
          Length = 1543

 Score =  192 bits (487), Expect = 1e-47
 Identities = 92/163 (56%), Positives = 120/163 (73%)
 Frame = -3

Query: 491  VKDIVDWPQPSTVSEVRGFLGITGWYMIFVKDYARIAAPLTELLKKGMRIEWKTEHESSL 312
            V+ I +W QP TVSE+R FLG+ G+Y  F++++++IA P+T LL+K ++ +W  E E S 
Sbjct: 825  VESITNWKQPKTVSEIRSFLGLAGYYRRFIENFSKIAKPMTRLLQKDVKYKWSEECEQSF 884

Query: 311  AKLKEFLV*APILKLPDFSKESEVAIDASKFALGGVLTQAGRPVAYTSRKLRDHEKNYPT 132
             +LK  L+ APIL LPD  K  +V  DASK  LG VL Q G+ VAY SR+LR HEKNYPT
Sbjct: 885  QELKNRLISAPILILPDPKKGFQVYCDASKLGLGCVLMQDGKVVAYASRQLRPHEKNYPT 944

Query: 131  HDLELLAVIHALKLWRHYLLGRKFQLVTDHKSLKWILTQTNLN 3
            HDLEL AV+HALK+WRHYL G + ++ TDHKSLK+I TQ +LN
Sbjct: 945  HDLELAAVVHALKIWRHYLFGTRTEVYTDHKSLKYIFTQPDLN 987


>tr|Q2QWQ0|Q2QWQ0_ORYSJ Retrotransposon protein, putative, Ty3-gypsy
            subclass OS=Oryza sativa subsp. japonica
            GN=LOC_Os12g08620 PE=4 SV=1
          Length = 1197

 Score =  192 bits (487), Expect = 1e-47
 Identities = 90/163 (55%), Positives = 121/163 (74%)
 Frame = -3

Query: 491  VKDIVDWPQPSTVSEVRGFLGITGWYMIFVKDYARIAAPLTELLKKGMRIEWKTEHESSL 312
            V+ +  W  P TVS++R FLG+ G+Y  F+++++RIA P+T+LLKK  + +W  E + S 
Sbjct: 690  VESVTKWTPPKTVSQIRSFLGLAGYYRRFIENFSRIARPMTQLLKKNEKFKWTAECDQSF 749

Query: 311  AKLKEFLV*APILKLPDFSKESEVAIDASKFALGGVLTQAGRPVAYTSRKLRDHEKNYPT 132
             KLK+ LV AP+L LPD +K+ +V  DAS+  LG VL Q GR VAY SR+LR HE NYPT
Sbjct: 750  EKLKKKLVTAPVLILPDQTKDFQVYYDASRHGLGCVLMQEGRVVAYASRQLRPHEGNYPT 809

Query: 131  HDLELLAVIHALKLWRHYLLGRKFQLVTDHKSLKWILTQTNLN 3
            HDLEL AV+HALK+WRHYL+G + ++ TDHKSLK+I TQ +LN
Sbjct: 810  HDLELAAVVHALKIWRHYLIGNRCEVYTDHKSLKYIFTQLDLN 852