BP919420 |
Clone id |
YMU001_000124_H08 |
Library |
YMU01 |
Length |
471 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000124_H08. |
Accession |
BP919420 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1725Contig1 |
Sequence |
ACAATCCTTGACCTTTCATGAATGCTTCCTCTCTCTGGGACCTTGTTAACTTGGCGCTAG GAACAACTCCCATAAATTGCCCTTCCTTCCCTAACCCAGAATCTTTGCACTTGCGCACAA CCTTCTCTTCAGTCCTTGGAGGGTGGTTTAACACATCACGATCTTCTTGAGCACCATCAA GGACAAAATTTTCCTTACTTGATTTGGCTCTCTTTGACCTGTGCTCTTTATGGTCTTCTT TATGTGGAACAGTACTAGGGCTTCGGGCATGCTTTTGGAGCACATCAGCACCATAGCAAT GGCTGCTGCCACGTTGACCATTCAAAAAGCTACCACTACTGTCACTCTGAGAGCCCTCTC CATCCTTTGACCTATGAACCGCCTCTCTTGACTTCCCCTTGCTTGACGATTTAGAGCTCG AATGACTTCCTCTATGTCTTTCTTTGTGCCTCCTTGTGGAGGCATCATCTC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8BI67 |
Definition |
sp|Q8BI67|ZN473_MOUSE Zinc finger protein 473 homolog OS=Mus musculus |
Align length |
92 |
Score (bit) |
33.9 |
E-value |
0.37 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B0WBW3 |
Definition |
tr|B0WBW3|B0WBW3_CULQU Putative uncharacterized protein OS=Culex quinquefasciatus |
Align length |
75 |
Score (bit) |
36.6 |
E-value |
0.65 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP919420|Adiantum capillus-veneris mRNA, clone: YMU001_000124_H08. (471 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B0WBW3|B0WBW3_CULQU Putative uncharacterized protein OS=Culex... 37 0.65 tr|A5K1X7|A5K1X7_PLAVI Putative uncharacterized protein OS=Plasm... 36 1.1 tr|B6NXK9|B6NXK9_BRAFL Putative uncharacterized protein (Fragmen... 35 1.4 tr|Q699W7|Q699W7_SIVCZ Pol protein (Fragment) OS=Simian immunode... 34 3.2 tr|A7E302|A7E302_BOVIN C26H10ORF6 protein OS=Bos taurus GN=C26H1... 34 3.2 tr|Q69ZQ9|Q69ZQ9_MOUSE MKIAA1141 protein (Fragment) OS=Mus muscu... 34 4.2 tr|Q4VA40|Q4VA40_MOUSE Zfp473 protein OS=Mus musculus GN=Zfp473 ... 34 4.2 tr|B6NXJ4|B6NXJ4_BRAFL Putative uncharacterized protein OS=Branc... 34 4.2 tr|B6K618|B6K618_SCHJP DNA repair protein rad5 OS=Schizosaccharo... 34 4.2 tr|Q4SLK8|Q4SLK8_TETNG Chromosome 15 SCAF14556, whole genome sho... 33 9.3 tr|A9CMA7|A9CMA7_RAT LOC304758 protein OS=Rattus norvegicus GN=C... 33 9.3 tr|B6MAL4|B6MAL4_BRAFL Putative uncharacterized protein OS=Branc... 33 9.3 tr|B3NV36|B3NV36_DROER GG18754 OS=Drosophila erecta GN=GG18754 P... 33 9.3 tr|A0D4E6|A0D4E6_PARTE Chromosome undetermined scaffold_37, whol... 33 9.3 tr|A6UTP6|A6UTP6_META3 Histone acetyltransferase, ELP3 family OS... 33 9.3
>tr|B0WBW3|B0WBW3_CULQU Putative uncharacterized protein OS=Culex quinquefasciatus GN=CpipJ_CPIJ004662 PE=4 SV=1 Length = 1149
Score = 36.6 bits (83), Expect = 0.65 Identities = 18/75 (24%), Positives = 42/75 (56%) Frame = -3
Query: 250 VPHKEDHKEHRSKRAKSSKENFVLDGAQEDRDVLNHPPRTEEKVVRKCKDSGLGKEGQFM 71 VP KE+ + + K K +K++ V++GA+E+ D + +++ V K ++ L ++ + + Sbjct: 422 VPTKEEESDTKKKNQKKTKKDTVVEGAEEECDQGESVVKAKKRRVEKVEEEPLEQQQETV 481
Query: 70 GVVPSAKLTRSQREE 26 + + + R + EE Sbjct: 482 KNIVTVEKEREKEEE 496
>tr|A5K1X7|A5K1X7_PLAVI Putative uncharacterized protein OS=Plasmodium vivax GN=PVX_113825 PE=4 SV=1 Length = 3996
Score = 35.8 bits (81), Expect = 1.1 Identities = 18/56 (32%), Positives = 31/56 (55%) Frame = -3
Query: 301 HCYGADVLQKHARSPSTVPHKEDHKEHRSKRAKSSKENFVLDGAQEDRDVLNHPPR 134 HC G + +KH+ H HK+ + + A S+KEN+ D A+E+R+ + P+ Sbjct: 757 HCLGRSLKRKHSLGEEKSAHGCTHKQIK-RDAVSAKENYTHDKAEENREQESREPK 811
>tr|B6NXK9|B6NXK9_BRAFL Putative uncharacterized protein (Fragment) OS=Branchiostoma floridae GN=BRAFLDRAFT_269557 PE=4 SV=1 Length = 365
Score = 35.4 bits (80), Expect = 1.4 Identities = 20/67 (29%), Positives = 34/67 (50%) Frame = -3
Query: 286 DVLQKHARSPSTVPHKEDHKEHRSKRAKSSKENFVLDGAQEDRDVLNHPPRTEEKVVRKC 107 D+ +K A K++ +E K+A+ S+ +F +DG ++D D + EE+V Sbjct: 119 DLAKKRAEVLERKEEKKERRERARKQAQLSQLSFAVDGEEDDEDDDDDEEEEEEEVQPVF 178
Query: 106 KDSGLGK 86 K LGK Sbjct: 179 KKKKLGK 185
>tr|Q699W7|Q699W7_SIVCZ Pol protein (Fragment) OS=Simian immunodeficiency virus (isolate CPZ GAB1) PE=4 SV=1 Length = 1007
Score = 34.3 bits (77), Expect = 3.2 Identities = 19/50 (38%), Positives = 25/50 (50%) Frame = -3
Query: 199 SKENFVLDGAQEDRDVLNHPPRTEEKVVRKCKDSGLGKEGQFMGVVPSAK 50 SK N V D +L HP TE K+V K + GKE ++ VP+ K Sbjct: 651 SKMNIVTDSQYALGIILEHPSETEHKIVEKVIQALQGKEQIYLAWVPAHK 700
>tr|A7E302|A7E302_BOVIN C26H10ORF6 protein OS=Bos taurus GN=C26H10ORF6 PE=2 SV=1 Length = 1054
Score = 34.3 bits (77), Expect = 3.2 Identities = 33/109 (30%), Positives = 49/109 (44%), Gaps = 10/109 (9%) Frame = -3
Query: 307 SSHCYGADVLQKHARSPSTVPHKEDHKEHRSKRAKSSKENFVLDGAQEDRDVLNHPPRTE 128 SS G+ + H R STVP K R K S +F +++DR +L+ P ++ Sbjct: 14 SSPAPGSSPPRCHLRPGSTVPAAAGKKTERPGDRKQSIIDFFKPASKQDRRMLDSPQKSN 73
Query: 127 EKVVRKCKDSGLGKEG--QFMGVVPSAKLTRSQRE--------EAFMKG 11 K +SGL G QF + S K ++ +R EAF+KG Sbjct: 74 IKY----GESGLSISGTEQFERKLSSPKSSKPKRVPSEKSPVLEAFIKG 118
>tr|Q69ZQ9|Q69ZQ9_MOUSE MKIAA1141 protein (Fragment) OS=Mus musculus GN=Zfp473 PE=2 SV=1 Length = 886
Score = 33.9 bits (76), Expect = 4.2 Identities = 26/92 (28%), Positives = 36/92 (39%), Gaps = 5/92 (5%) Frame = -3
Query: 328 FLNGQRGSSHCYGADVLQKHARSPSTVPH-----KEDHKEHRSKRAKSSKENFVLDGAQE 164 F NGQ C G D L P ++P KE +H+S +KS +E Sbjct: 107 FSNGQLNFEACIGEDWLNSFLGDPESLPRPDISDKESPADHQSPESKSGLSPGPPLCTRE 166
Query: 163 DRDVLNHPPRTEEKVVRKCKDSGLGKEGQFMG 68 D + P +T V+ K S L +E G Sbjct: 167 DAVMSASPEKTLTPVILKESRSDLSQEDSVQG 198
>tr|Q4VA40|Q4VA40_MOUSE Zfp473 protein OS=Mus musculus GN=Zfp473 PE=2 SV=2 Length = 891
Score = 33.9 bits (76), Expect = 4.2 Identities = 26/92 (28%), Positives = 36/92 (39%), Gaps = 5/92 (5%) Frame = -3
Query: 328 FLNGQRGSSHCYGADVLQKHARSPSTVPH-----KEDHKEHRSKRAKSSKENFVLDGAQE 164 F NGQ C G D L P ++P KE +H+S +KS +E Sbjct: 112 FSNGQLNFEACIGEDWLNSFLGDPESLPRPDISDKESPADHQSPESKSGLSPGPPLCTRE 171
Query: 163 DRDVLNHPPRTEEKVVRKCKDSGLGKEGQFMG 68 D + P +T V+ K S L +E G Sbjct: 172 DAVMSASPEKTLTPVILKESRSDLSQEDSVQG 203
>tr|B6NXJ4|B6NXJ4_BRAFL Putative uncharacterized protein OS=Branchiostoma floridae GN=BRAFLDRAFT_100301 PE=4 SV=1 Length = 1436
Score = 33.9 bits (76), Expect = 4.2 Identities = 19/67 (28%), Positives = 34/67 (50%) Frame = -3
Query: 286 DVLQKHARSPSTVPHKEDHKEHRSKRAKSSKENFVLDGAQEDRDVLNHPPRTEEKVVRKC 107 D+ +K A K++ +E K+A+ S+ +F +DG +++ D + EE+V Sbjct: 91 DLAKKRAEVLERKEEKKERRERARKQAQLSQLSFAVDGEEDEEDDDDDEEEEEEEVQPVF 150
Query: 106 KDSGLGK 86 K LGK Sbjct: 151 KKKKLGK 157
>tr|B6K618|B6K618_SCHJP DNA repair protein rad5 OS=Schizosaccharomyces japonicus yFS275 GN=SJAG_04147 PE=4 SV=1 Length = 850
Score = 33.9 bits (76), Expect = 4.2 Identities = 24/65 (36%), Positives = 30/65 (46%), Gaps = 4/65 (6%) Frame = -3
Query: 268 ARSPSTVPHKED----HKEHRSKRAKSSKENFVLDGAQEDRDVLNHPPRTEEKVVRKCKD 101 ARSPS P K HKE S++ K K++ DG +E D L P +E K D Sbjct: 2 ARSPSPEPRKHKSKGAHKEKHSEKGKHKKKSNPFDGLKELADSL---PTVDESSSAKRSD 58
Query: 100 SGLGK 86 GK Sbjct: 59 KHSGK 63
>tr|Q4SLK8|Q4SLK8_TETNG Chromosome 15 SCAF14556, whole genome shotgun sequence. (Fragment) OS=Tetraodon nigroviridis GN=GSTENG00016196001 PE=4 SV=1 Length = 444
Score = 32.7 bits (73), Expect = 9.3 Identities = 23/80 (28%), Positives = 37/80 (46%) Frame = -3
Query: 322 NGQRGSSHCYGADVLQKHARSPSTVPHKEDHKEHRSKRAKSSKENFVLDGAQEDRDVLNH 143 N +R S +KH+RSPS HK++ K+ + K + D ++E+R+ Sbjct: 284 NRRRRRSQSISRSPKRKHSRSPSPRRHKKEKKKDKEKERDRKTDK---DYSREERE---- 336
Query: 142 PPRTEEKVVRKCKDSGLGKE 83 P + +K K KD KE Sbjct: 337 -PSSSKKKKNKDKDKEKEKE 355
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