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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP919422
Clone id YMU001_000124_H10
Library
Length 382
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000124_H10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
ATTCGCTTTTGTACATTGGCTTGTCTTCTTCGTCTCTGTCACCTCTGATGTGACTTCTGC
GCCTTTATTTCCTCCTGCAAATGATTGACAGGCAAGATTCCTTCTGCTCTCACCGAGCTG
AGAGTGTGCAGAAGCTCCATTTATGGCATTTGTCCGTCTCCTTGGAATTTCCTTTGCAGT
GCTTGAAAGGCCAAACGAAATCAGATACTTTCTCCCACCCCTTCTGCCTTTCTAGCGTCA
AAACTGTTAGAGGAGACTGGCTCATTTCAGTGATATCAGCAAGACGACCAGGTGCCTCTC
CTAGGAGTGTGGGCTGCCTCTTTTGCAATTCTCCCAAAACTTCATTTTCTCTCTGTGCCT
TCACAGTGCCATCTATGCTCAA
■■Homology search results ■■ -
sp_hit_id Q9NZM1
Definition sp|Q9NZM1|MYOF_HUMAN Myoferlin OS=Homo sapiens
Align length 51
Score (bit) 30.4
E-value 2.8
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919422|Adiantum capillus-veneris mRNA, clone:
YMU001_000124_H10.
         (382 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9NZM1|MYOF_HUMAN Myoferlin OS=Homo sapiens GN=FER1L3 PE=1 SV=1     30   2.8  
sp|Q45515|HYDA_BACST D-hydantoinase OS=Bacillus stearothermophil...    30   2.8  
sp|Q69ZN7|MYOF_MOUSE Myoferlin OS=Mus musculus GN=Myof PE=1 SV=2       30   3.7  
sp|B0TY78|MNMG_FRAP2 tRNA uridine 5-carboxymethylaminomethyl mod...    30   3.7  
sp|A4IYN2|MNMG_FRATW tRNA uridine 5-carboxymethylaminomethyl mod...    30   4.8  
sp|Q5NFM8|MNMG_FRATT tRNA uridine 5-carboxymethylaminomethyl mod...    30   4.8  
sp|Q0BMJ8|MNMG_FRATO tRNA uridine 5-carboxymethylaminomethyl mod...    30   4.8  
sp|A0Q753|MNMG_FRATN tRNA uridine 5-carboxymethylaminomethyl mod...    30   4.8  
sp|Q2A464|MNMG_FRATH tRNA uridine 5-carboxymethylaminomethyl mod...    30   4.8  
sp|A7NBA3|MNMG_FRATF tRNA uridine 5-carboxymethylaminomethyl mod...    30   4.8  
sp|Q14H30|MNMG_FRAT1 tRNA uridine 5-carboxymethylaminomethyl mod...    30   4.8  
sp|Q14980|NUMA1_HUMAN Nuclear mitotic apparatus protein 1 OS=Hom...    29   8.2  
sp|Q9RJ20|COBQ_STRCO Cobyric acid synthase OS=Streptomyces coeli...    29   8.2  

>sp|Q9NZM1|MYOF_HUMAN Myoferlin OS=Homo sapiens GN=FER1L3 PE=1 SV=1
          Length = 2061

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
 Frame = -1

Query: 286  RLADITEMSQSPLTVLT-LERQKGWEKVSDFVWPFKHCKGNSKETDKCHKW 137
            R  D+T+ + S    +  L+ Q+GWE  S   W F H K  S +T +  +W
Sbjct: 1027 RKKDLTQTASSTARAMEELQDQEGWEYASLIGWKF-HWKQRSSDTFRRRRW 1076


>sp|Q45515|HYDA_BACST D-hydantoinase OS=Bacillus stearothermophilus
           PE=1 SV=1
          Length = 471

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 15/40 (37%), Positives = 24/40 (60%)
 Frame = -1

Query: 319 RQPTLLGEAPGRLADITEMSQSPLTVLTLERQKGWEKVSD 200
           R P L GEA GR   +TE++ S L V+ +   +  EK+++
Sbjct: 212 RPPELEGEATGRACQLTELAGSQLYVVHVSCAQAVEKIAE 251


>sp|Q69ZN7|MYOF_MOUSE Myoferlin OS=Mus musculus GN=Myof PE=1 SV=2
          Length = 2048

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
 Frame = -1

Query: 286  RLADITEMSQSPLTVLT-LERQKGWEKVSDFVWPFKHCKGNSKETDKCHKW 137
            R  D+T+ + S    +  LE ++GWE  S   W F H K  S +T +  +W
Sbjct: 1014 RKKDLTQTASSTARAMEELEDREGWEYASLIGWKF-HWKQRSSDTFRRRRW 1063


>sp|B0TY78|MNMG_FRAP2 tRNA uridine 5-carboxymethylaminomethyl
           modification enzyme mnmG OS=Francisella philomiragia
           subsp. philomiragia (strain ATCC 25017) GN=mnmG PE=3
           SV=1
          Length = 627

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 16/35 (45%), Positives = 24/35 (68%)
 Frame = -1

Query: 346 NEVLGELQKRQPTLLGEAPGRLADITEMSQSPLTV 242
           NEVL +L +++PT LGEA  R+  +T  + S LT+
Sbjct: 585 NEVLQKLSEQKPTTLGEA-SRIPGVTPAAVSLLTI 618


>sp|A4IYN2|MNMG_FRATW tRNA uridine 5-carboxymethylaminomethyl
           modification enzyme mnmG OS=Francisella tularensis
           subsp. tularensis (strain WY96-3418) GN=mnmG PE=3 SV=1
          Length = 627

 Score = 29.6 bits (65), Expect = 4.8
 Identities = 17/35 (48%), Positives = 24/35 (68%)
 Frame = -1

Query: 346 NEVLGELQKRQPTLLGEAPGRLADITEMSQSPLTV 242
           NEVL +L +++PT LGEA  R+  IT  + S LT+
Sbjct: 585 NEVLQKLTEQKPTTLGEA-SRIPGITPAAISLLTI 618


>sp|Q5NFM8|MNMG_FRATT tRNA uridine 5-carboxymethylaminomethyl
           modification enzyme mnmG OS=Francisella tularensis
           subsp. tularensis GN=mnmG PE=3 SV=1
          Length = 627

 Score = 29.6 bits (65), Expect = 4.8
 Identities = 17/35 (48%), Positives = 24/35 (68%)
 Frame = -1

Query: 346 NEVLGELQKRQPTLLGEAPGRLADITEMSQSPLTV 242
           NEVL +L +++PT LGEA  R+  IT  + S LT+
Sbjct: 585 NEVLQKLTEQKPTTLGEA-SRIPGITPAAISLLTI 618


>sp|Q0BMJ8|MNMG_FRATO tRNA uridine 5-carboxymethylaminomethyl
           modification enzyme mnmG OS=Francisella tularensis
           subsp. holarctica (strain OSU18) GN=mnmG PE=3 SV=1
          Length = 627

 Score = 29.6 bits (65), Expect = 4.8
 Identities = 17/35 (48%), Positives = 24/35 (68%)
 Frame = -1

Query: 346 NEVLGELQKRQPTLLGEAPGRLADITEMSQSPLTV 242
           NEVL +L +++PT LGEA  R+  IT  + S LT+
Sbjct: 585 NEVLQKLTEQKPTTLGEA-SRIPGITPAAISLLTI 618


>sp|A0Q753|MNMG_FRATN tRNA uridine 5-carboxymethylaminomethyl
           modification enzyme mnmG OS=Francisella tularensis
           subsp. novicida (strain U112) GN=mnmG PE=3 SV=1
          Length = 627

 Score = 29.6 bits (65), Expect = 4.8
 Identities = 17/35 (48%), Positives = 24/35 (68%)
 Frame = -1

Query: 346 NEVLGELQKRQPTLLGEAPGRLADITEMSQSPLTV 242
           NEVL +L +++PT LGEA  R+  IT  + S LT+
Sbjct: 585 NEVLQKLTEQKPTTLGEA-SRIPGITPAAISLLTI 618


>sp|Q2A464|MNMG_FRATH tRNA uridine 5-carboxymethylaminomethyl
           modification enzyme mnmG OS=Francisella tularensis
           subsp. holarctica (strain LVS) GN=mnmG PE=3 SV=1
          Length = 627

 Score = 29.6 bits (65), Expect = 4.8
 Identities = 17/35 (48%), Positives = 24/35 (68%)
 Frame = -1

Query: 346 NEVLGELQKRQPTLLGEAPGRLADITEMSQSPLTV 242
           NEVL +L +++PT LGEA  R+  IT  + S LT+
Sbjct: 585 NEVLQKLTEQKPTTLGEA-SRIPGITPAAISLLTI 618


>sp|A7NBA3|MNMG_FRATF tRNA uridine 5-carboxymethylaminomethyl
           modification enzyme mnmG OS=Francisella tularensis
           subsp. holarctica (strain FTA) GN=mnmG PE=3 SV=1
          Length = 627

 Score = 29.6 bits (65), Expect = 4.8
 Identities = 17/35 (48%), Positives = 24/35 (68%)
 Frame = -1

Query: 346 NEVLGELQKRQPTLLGEAPGRLADITEMSQSPLTV 242
           NEVL +L +++PT LGEA  R+  IT  + S LT+
Sbjct: 585 NEVLQKLTEQKPTTLGEA-SRIPGITPAAISLLTI 618
tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919422|Adiantum capillus-veneris mRNA, clone:
YMU001_000124_H10.
         (382 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

 ***** No hits found ******