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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP919427
Clone id YMU001_000125_A04
Library
Length 534
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000125_A04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
TCTAACAATGTTTCAAGTGAGAAGCCTGATTCCCAAAAGCTATACAACTCACTCTTTAAA
TATGCCCGAATTGGAGAATAGCCTCAGCCACCTATCTTCCTAGCGCTTCTTGGCAATGCT
CAAGTCCACATACAAACTGCCACCGGCGCAAAGTACCTGCATCTATCTTCATCTTCATAG
ATTGACTGTGAGTCAGAATGCCCAAAAATAGAAATATGCCCCAGTACCTACCTAGAATGT
TTGTTTCTTCTCTTGGCTGAGATAAAGCAGGCTTATACATTACTGGTTATCCATCCCTCT
GTCTGAAACCATACAAATGTTGAAATCACACTGGCAAGGTAATTTTGAATATCGCAGTAG
ACCTTCGACTACAACACCTCTTGTGTGACAATTCCTGTACACCGCAAGAAAAAGCTGTCT
TTGATCCCCTGGAAAAAGGTGAAGGTTTACAACTGCCTCGGTATAACATAACAAAAAGCT
TTACACCTGAAAACTCGAGCATGAAGCATCAATAGTAAGAGCCACCATCATCAT
■■Homology search results ■■ -
sp_hit_id Q9FD07
Definition sp|Q9FD07|SPLE_STAAU Serine protease splE OS=Staphylococcus aureus
Align length 48
Score (bit) 30.8
E-value 4.3
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919427|Adiantum capillus-veneris mRNA, clone:
YMU001_000125_A04.
         (534 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9FD07|SPLE_STAAU Serine protease splE OS=Staphylococcus aure...    31   4.3  
sp|A8Z4N5|SPLE_STAAT Serine protease splE OS=Staphylococcus aure...    31   4.3  
sp|Q6GFP0|SPLE_STAAR Serine protease splE OS=Staphylococcus aure...    31   4.3  
sp|A6QHZ2|SPLE_STAAE Serine protease splE OS=Staphylococcus aure...    31   4.3  
sp|Q5HEW4|SPLE_STAAC Serine protease splE OS=Staphylococcus aure...    31   4.3  
sp|Q2FXC7|SPLE_STAA8 Serine protease splE OS=Staphylococcus aure...    31   4.3  
sp|Q2FFT3|SPLE_STAA3 Serine protease splE OS=Staphylococcus aure...    31   4.3  

>sp|Q9FD07|SPLE_STAAU Serine protease splE OS=Staphylococcus aureus
           GN=splE PE=3 SV=1
          Length = 238

 Score = 30.8 bits (68), Expect = 4.3
 Identities = 15/48 (31%), Positives = 24/48 (50%)
 Frame = +3

Query: 201 PKNRNMPQYLPRMFVSSLG*DKAGLYITGYPSLCLKPYKC*NHTGKVI 344
           PKNRN   Y   + ++S   +   + I GYP   +  ++    TGKV+
Sbjct: 126 PKNRNFKDYTGILKIASEAKENERISIVGYPEPYINKFQMYESTGKVL 173


>sp|A8Z4N5|SPLE_STAAT Serine protease splE OS=Staphylococcus aureus
           (strain USA300 / TCH1516) GN=splE PE=3 SV=1
          Length = 238

 Score = 30.8 bits (68), Expect = 4.3
 Identities = 15/48 (31%), Positives = 24/48 (50%)
 Frame = +3

Query: 201 PKNRNMPQYLPRMFVSSLG*DKAGLYITGYPSLCLKPYKC*NHTGKVI 344
           PKNRN   Y   + ++S   +   + I GYP   +  ++    TGKV+
Sbjct: 126 PKNRNFKDYTGILKIASEAKENERISIVGYPEPYINKFQMYESTGKVL 173


>sp|Q6GFP0|SPLE_STAAR Serine protease splE OS=Staphylococcus aureus
           (strain MRSA252) GN=splE PE=3 SV=1
          Length = 238

 Score = 30.8 bits (68), Expect = 4.3
 Identities = 15/48 (31%), Positives = 24/48 (50%)
 Frame = +3

Query: 201 PKNRNMPQYLPRMFVSSLG*DKAGLYITGYPSLCLKPYKC*NHTGKVI 344
           PKNRN   Y   + ++S   +   + I GYP   +  ++    TGKV+
Sbjct: 126 PKNRNFKDYTGILKIASEAKENERISIVGYPEPYINKFQMYESTGKVL 173


>sp|A6QHZ2|SPLE_STAAE Serine protease splE OS=Staphylococcus aureus
           (strain Newman) GN=splE PE=3 SV=1
          Length = 238

 Score = 30.8 bits (68), Expect = 4.3
 Identities = 15/48 (31%), Positives = 24/48 (50%)
 Frame = +3

Query: 201 PKNRNMPQYLPRMFVSSLG*DKAGLYITGYPSLCLKPYKC*NHTGKVI 344
           PKNRN   Y   + ++S   +   + I GYP   +  ++    TGKV+
Sbjct: 126 PKNRNFKDYTGILKIASEAKENERISIVGYPEPYINKFQMYESTGKVL 173


>sp|Q5HEW4|SPLE_STAAC Serine protease splE OS=Staphylococcus aureus
           (strain COL) GN=splE PE=3 SV=1
          Length = 238

 Score = 30.8 bits (68), Expect = 4.3
 Identities = 15/48 (31%), Positives = 24/48 (50%)
 Frame = +3

Query: 201 PKNRNMPQYLPRMFVSSLG*DKAGLYITGYPSLCLKPYKC*NHTGKVI 344
           PKNRN   Y   + ++S   +   + I GYP   +  ++    TGKV+
Sbjct: 126 PKNRNFKDYTGILKIASEAKENERISIVGYPEPYINKFQMYESTGKVL 173


>sp|Q2FXC7|SPLE_STAA8 Serine protease splE OS=Staphylococcus aureus
           (strain NCTC 8325) GN=splE PE=2 SV=1
          Length = 238

 Score = 30.8 bits (68), Expect = 4.3
 Identities = 15/48 (31%), Positives = 24/48 (50%)
 Frame = +3

Query: 201 PKNRNMPQYLPRMFVSSLG*DKAGLYITGYPSLCLKPYKC*NHTGKVI 344
           PKNRN   Y   + ++S   +   + I GYP   +  ++    TGKV+
Sbjct: 126 PKNRNFKDYTGILKIASEAKENERISIVGYPEPYINKFQMYESTGKVL 173


>sp|Q2FFT3|SPLE_STAA3 Serine protease splE OS=Staphylococcus aureus
           (strain USA300) GN=splE PE=3 SV=1
          Length = 238

 Score = 30.8 bits (68), Expect = 4.3
 Identities = 15/48 (31%), Positives = 24/48 (50%)
 Frame = +3

Query: 201 PKNRNMPQYLPRMFVSSLG*DKAGLYITGYPSLCLKPYKC*NHTGKVI 344
           PKNRN   Y   + ++S   +   + I GYP   +  ++    TGKV+
Sbjct: 126 PKNRNFKDYTGILKIASEAKENERISIVGYPEPYINKFQMYESTGKVL 173
tr_hit_id Q89L47
Definition tr|Q89L47|Q89L47_BRAJA Blr4701 protein OS=Bradyrhizobium japonicum
Align length 30
Score (bit) 33.1
E-value 9.2
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919427|Adiantum capillus-veneris mRNA, clone:
YMU001_000125_A04.
         (534 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q89L47|Q89L47_BRAJA Blr4701 protein OS=Bradyrhizobium japonic...    33   9.2  
tr|A8GCD4|A8GCD4_SERP5 Efflux transporter, RND family, MFP subun...    33   9.3  

>tr|Q89L47|Q89L47_BRAJA Blr4701 protein OS=Bradyrhizobium japonicum
           GN=blr4701 PE=4 SV=1
          Length = 250

 Score = 33.1 bits (74), Expect = 9.2
 Identities = 13/30 (43%), Positives = 20/30 (66%)
 Frame = -3

Query: 235 LGRYWGIFLFLGILTHSQSMKMKIDAGTLR 146
           +G++   F FLG+ T S S+K  +D GT+R
Sbjct: 208 MGKHTDTFTFLGVATRSDSIKQDVDMGTVR 237


>tr|A8GCD4|A8GCD4_SERP5 Efflux transporter, RND family, MFP subunit
           OS=Serratia proteamaculans (strain 568) GN=Spro_1670
           PE=4 SV=1
          Length = 348

 Score = 33.1 bits (74), Expect = 9.3
 Identities = 19/40 (47%), Positives = 24/40 (60%)
 Frame = +1

Query: 22  KPDSQKLYNSLFKYARIGE*PQPPIFLALLGNAQVHIQTA 141
           +P  +K+ N++F YAR  E P P   L L   AQVHIQ A
Sbjct: 241 QPTPEKVNNAIFYYARF-EVPNPEGLLRLQMTAQVHIQLA 279