BP919434 [AcEST]

BP919434
Clone id	YMU001_000125_A11
Library	YMU01
Length	559
Definition	Adiantum capillus-veneris mRNA. clone: YMU001_000125_A11.
Accession	BP919434
Tissue type	prothallium
Developmental stage	-
Contig ID	CL2896Contig1
Sequence	GCGGACTTGCGAGTCGCCAGTGGGAACGATCTTGACCGTCCAATCATCCAATCTAGTCAG CGAGGCTGAACACCCGGCACCCTCAATCTCCTTGTTCCCTATTCTTTATGAAGATGTGGC ATAGATTGAGGGGCGAGACTCCATCTTTGATATCATGACTCAAGAGTCCAAGAAAAAAGT GCAGTTGTTGTAACTTCATGCATGAATAAACAGCTTTTGTTGAGAGTCAAGGGGCTAGTT ACTCATCCATCACTAGATTCTTGTGGTTAATACAAATCATGATTAGCCTAGTCAAAGTGG GTAGGTGGTGTTTACGGCACTTTACTTGGCTTCACATGGTGCTTCACATGGGCTAGGTGC CCTAGCTTGGCACACATGCCCCAACAGCTAGAGAGGTAGATTTAAATAATTCTTTGTGGG CTTTTGATGTGCAAGGCTGCCCATTTCTGCATCTAGATTCTAAACCATAGGGGGCAGCAC TTTAAGGTGTGACCAGGCTTATCATGAGCATCAACTCTCAAAATAAATTACCATATATAC GTTCTGGCTGGGCCTGCAT
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	Q6A5X8
Definition	sp\|Q6A5X8\|SYR_PROAC Arginyl-tRNA synthetase OS=Propionibacterium acnes
Align length	40
Score (bit)	30.8
E-value	4.7
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP919434\|Adiantum capillus-veneris mRNA, clone: YMU001_000125_A11. (559 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp\|Q6A5X8\|SYR_PROAC Arginyl-tRNA synthetase OS=Propionibacterium... 31 4.7 >sp\|Q6A5X8\|SYR_PROAC Arginyl-tRNA synthetase OS=Propionibacterium acnes GN=argS PE=3 SV=1 Length = 556 Score = 30.8 bits (68), Expect = 4.7 Identities = 18/40 (45%), Positives = 26/40 (65%), Gaps = 1/40 (2%) Frame = +2 Query: 35 TVQSSNLVSEAE-HPAPSISLFPILYEDVA*IEGRDSIFD 151 TV S+L+ EAE H AP+I+L I Y D++ +D +FD Sbjct: 375 TVSLSDLLDEAETHAAPNIALAAIKYADLSNGLQKDYVFD 414
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	-
Definition	No hits.
Align length	-
Score (bit)	-
E-value	-
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP919434\|Adiantum capillus-veneris mRNA, clone: YMU001_000125_A11. (559 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done *** No hits found ****