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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP919440
Clone id YMU001_000125_B05
Library
Length 479
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000125_B05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
CATGATAGTAGGCACTGCTTCAATGTAATTTTATGAATGTCGATTTTCAAGTTTTGGTGG
ATACCTTTTACTTTGAATTTCACATTTTTAATCATTTGATTAAGTAATCGTTGTTTTGGT
TTTGTGAATAATTCAGAGTTGTGTTCAACACAATGTTTGGCTTCAGTACGAACTTTTGGA
TCGCTACCACATCTAGATTTTTACTGGGGCTTGTCGATGGGATGCTAGGACCTGTTCGGG
TAGGTTGATTTGGTGTATAATGAGCTTAAGGTCAAAAGGTTTCCTGTAATGCAGCAAGCC
CTTCTTCTTCTACGATTTGTAGGCATATGCTTCAGAGATATGCACTGAAGAATATCAGGC
ATTAGGGTTGTCAATGGTAAATGAGAGTGTTTCCTTGAATAGATTTGGCTTCTTAATTAT
TATTTCTAATCAGGGCAGTTTCGGTGGCTTTATCCCTTCTTTCTAACAGGTGGGCACAA
■■Homology search results ■■ -
sp_hit_id P25351
Definition sp|P25351|YCR3_YEAST Uncharacterized membrane protein YCR023C OS=Saccharomyces cerevisiae
Align length 29
Score (bit) 31.2
E-value 2.5
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919440|Adiantum capillus-veneris mRNA, clone:
YMU001_000125_B05.
         (479 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P25351|YCR3_YEAST Uncharacterized membrane protein YCR023C OS...    31   2.5  
sp|P76205|ARPB_ECOLI Putative ankyrin repeat protein B OS=Escher...    29   9.6  

>sp|P25351|YCR3_YEAST Uncharacterized membrane protein YCR023C
           OS=Saccharomyces cerevisiae GN=YCR023C PE=1 SV=2
          Length = 611

 Score = 31.2 bits (69), Expect = 2.5
 Identities = 13/29 (44%), Positives = 21/29 (72%)
 Frame = +3

Query: 153 MFGFSTNFWIATTSRFLLGLVDGMLGPVR 239
           + GFS NF+ A  +R L+GL++G +G +R
Sbjct: 105 ILGFSRNFYQALVARSLMGLLNGNVGVIR 133


>sp|P76205|ARPB_ECOLI Putative ankyrin repeat protein B
           OS=Escherichia coli (strain K12) GN=arpB PE=5 SV=2
          Length = 632

 Score = 29.3 bits (64), Expect = 9.6
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = +3

Query: 282 SCNAASPSSSTICRHMLQRYALKNIRH 362
           +C   SPS +  CRH+  +YAL ++R+
Sbjct: 159 ACFLQSPSDAIFCRHLSLQYALDSLRN 185
tr_hit_id B8LP10
Definition tr|B8LP10|B8LP10_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 34
Score (bit) 53.5
E-value 3.0e-10
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919440|Adiantum capillus-veneris mRNA, clone:
YMU001_000125_B05.
         (479 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B8LP10|B8LP10_PICSI Putative uncharacterized protein OS=Picea...    54   3e-10
tr|A7PTF4|A7PTF4_VITVI Chromosome chr8 scaffold_29, whole genome...    50   2e-09
tr|A7QAL1|A7QAL1_VITVI Chromosome undetermined scaffold_71, whol...    53   2e-09
tr|A7QAK9|A7QAK9_VITVI Chromosome undetermined scaffold_71, whol...    53   6e-09
tr|Q8H6D6|Q8H6D6_ORYSJ Major facilitator superfamily antiporter ...    48   8e-09
tr|B8ACJ9|B8ACJ9_ORYSI Putative uncharacterized protein OS=Oryza...    48   8e-09
tr|A2ZRU4|A2ZRU4_ORYSJ Putative uncharacterized protein OS=Oryza...    48   8e-09
tr|B4FYC3|B4FYC3_MAIZE Putative uncharacterized protein OS=Zea m...    48   8e-09
tr|A7QAK8|A7QAK8_VITVI Chromosome undetermined scaffold_71, whol...    49   1e-08
tr|A7QAK3|A7QAK3_VITVI Chromosome undetermined scaffold_71, whol...    49   1e-08
tr|Q2PF04|Q2PF04_TRIPR Putative transporter-like protein OS=Trif...    52   2e-08
tr|B4FAZ2|B4FAZ2_MAIZE Putative uncharacterized protein OS=Zea m...    52   5e-08
tr|B4FA49|B4FA49_MAIZE Carbohydrate transporter/ sugar porter/ t...    52   5e-08
tr|B6SYQ6|B6SYQ6_MAIZE Carbohydrate transporter/ sugar porter/ t...    52   9e-08
tr|Q5NBL6|Q5NBL6_ORYSJ Putative major facilitator superfamily an...    50   9e-08
tr|B8AC81|B8AC81_ORYSI Putative uncharacterized protein OS=Oryza...    50   9e-08
tr|A2ZRL5|A2ZRL5_ORYSJ Putative uncharacterized protein OS=Oryza...    50   9e-08
tr|B6SKE4|B6SKE4_MAIZE Carbohydrate transporter/ sugar porter/ t...    51   1e-07
tr|B8B046|B8B046_ORYSI Putative uncharacterized protein OS=Oryza...    45   1e-07
tr|Q0DJL0|Q0DJL0_ORYSJ Os05g0268400 protein OS=Oryza sativa subs...    45   1e-07
tr|Q5WML2|Q5WML2_ORYSJ Putative uncharacterized protein OSJNBa00...    45   1e-07
tr|Q2RAW8|Q2RAW8_ORYSJ Major facilitator superfamily antiporter,...    49   2e-07
tr|B8BIX9|B8BIX9_ORYSI Putative uncharacterized protein OS=Oryza...    49   2e-07
tr|Q2QY51|Q2QY51_ORYSJ Major facilitator superfamily antiporter,...    49   2e-07
tr|Q0IQB4|Q0IQB4_ORYSJ Os12g0132500 protein OS=Oryza sativa subs...    49   2e-07
tr|A9RKY4|A9RKY4_PHYPA Predicted protein (Fragment) OS=Physcomit...    48   2e-07
tr|B6TU20|B6TU20_MAIZE Carbohydrate transporter/ sugar porter/ t...    49   4e-07
tr|Q9LZG8|Q9LZG8_ARATH Transporter-like protein OS=Arabidopsis t...    46   4e-07
tr|Q3EAQ5|Q3EAQ5_ARATH Uncharacterized protein At3g43790.1 (At3g...    46   4e-07
tr|Q2RAW4|Q2RAW4_ORYSJ Major facilitator superfamily antiporter,...    47   4e-07

>tr|B8LP10|B8LP10_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 512

 Score = 53.5 bits (127), Expect(2) = 3e-10
 Identities = 22/34 (64%), Positives = 29/34 (85%)
 Frame = +3

Query: 138 VVFNTMFGFSTNFWIATTSRFLLGLVDGMLGPVR 239
           +VFNT+FG ST+FW+A + RFLLG  +GMLGPV+
Sbjct: 121 IVFNTLFGMSTSFWMAVSMRFLLGSFNGMLGPVK 154



 Score = 34.3 bits (77), Expect(2) = 3e-10
 Identities = 15/19 (78%), Positives = 18/19 (94%)
 Frame = +2

Query: 323 AYASEICTEEYQALGLSMV 379
           AYASEIC +E+QALGLS+V
Sbjct: 155 AYASEICRDEHQALGLSVV 173


>tr|A7PTF4|A7PTF4_VITVI Chromosome chr8 scaffold_29, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00023334001
           PE=4 SV=1
          Length = 476

 Score = 49.7 bits (117), Expect(2) = 2e-09
 Identities = 20/34 (58%), Positives = 28/34 (82%)
 Frame = +3

Query: 138 VVFNTMFGFSTNFWIATTSRFLLGLVDGMLGPVR 239
           ++FNT+FG STN W+A ++RFLLG   G+LGP+R
Sbjct: 120 IIFNTLFGLSTNVWMALSTRFLLGSFCGILGPMR 153



 Score = 35.4 bits (80), Expect(2) = 2e-09
 Identities = 18/44 (40%), Positives = 30/44 (68%)
 Frame = +2

Query: 323 AYASEICTEEYQALGLSMVNESVSLNRFGFLIIISNQGSFGGFI 454
           AYASE+C +EYQALG+S+++ +     +G  ++I    + GGF+
Sbjct: 154 AYASEVCRKEYQALGMSIISTA-----WGIGLVIG--PALGGFL 190


>tr|A7QAL1|A7QAL1_VITVI Chromosome undetermined scaffold_71, whole
           genome shotgun sequence OS=Vitis vinifera
           GN=GSVIVT00033975001 PE=4 SV=1
          Length = 487

 Score = 53.1 bits (126), Expect(2) = 2e-09
 Identities = 20/34 (58%), Positives = 30/34 (88%)
 Frame = +3

Query: 138 VVFNTMFGFSTNFWIATTSRFLLGLVDGMLGPVR 239
           V+FNT+FG S NFW+A ++RFLLG ++G+LGP++
Sbjct: 118 VIFNTLFGLSVNFWMALSTRFLLGSLNGLLGPIK 151



 Score = 31.6 bits (70), Expect(2) = 2e-09
 Identities = 20/44 (45%), Positives = 28/44 (63%)
 Frame = +2

Query: 323 AYASEICTEEYQALGLSMVNESVSLNRFGFLIIISNQGSFGGFI 454
           AYA+EI  +EYQALGLS V+ +     +G  +II    + GGF+
Sbjct: 152 AYAAEIFRDEYQALGLSTVSTA-----WGIGLIIG--PALGGFL 188


>tr|A7QAK9|A7QAK9_VITVI Chromosome undetermined scaffold_71, whole
           genome shotgun sequence OS=Vitis vinifera
           GN=GSVIVT00033972001 PE=4 SV=1
          Length = 548

 Score = 52.8 bits (125), Expect(2) = 6e-09
 Identities = 20/34 (58%), Positives = 30/34 (88%)
 Frame = +3

Query: 138 VVFNTMFGFSTNFWIATTSRFLLGLVDGMLGPVR 239
           V+FNT+FG S NFW+A ++RFLLG ++G+LGP++
Sbjct: 179 VIFNTLFGLSVNFWMALSTRFLLGSLNGVLGPIK 212



 Score = 30.4 bits (67), Expect(2) = 6e-09
 Identities = 14/20 (70%), Positives = 17/20 (85%)
 Frame = +2

Query: 323 AYASEICTEEYQALGLSMVN 382
           AYA+EI  +EYQALGLS V+
Sbjct: 213 AYAAEIFRDEYQALGLSTVS 232


>tr|Q8H6D6|Q8H6D6_ORYSJ Major facilitator superfamily antiporter
           (Os01g0279400 protein) OS=Oryza sativa subsp. japonica
           GN=mfs1 PE=2 SV=1
          Length = 497

 Score = 48.1 bits (113), Expect(2) = 8e-09
 Identities = 19/34 (55%), Positives = 28/34 (82%)
 Frame = +3

Query: 138 VVFNTMFGFSTNFWIATTSRFLLGLVDGMLGPVR 239
           +VFNT+FG ST +W+A  +R LLGL+ G+LGP++
Sbjct: 131 IVFNTLFGLSTTYWMAIVTRGLLGLLCGILGPIK 164



 Score = 34.7 bits (78), Expect(2) = 8e-09
 Identities = 14/22 (63%), Positives = 19/22 (86%)
 Frame = +2

Query: 323 AYASEICTEEYQALGLSMVNES 388
           AYASE+C +E+QALG+S+V  S
Sbjct: 165 AYASEVCRKEHQALGISLVTSS 186


>tr|B8ACJ9|B8ACJ9_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_01400 PE=4 SV=1
          Length = 491

 Score = 48.1 bits (113), Expect(2) = 8e-09
 Identities = 19/34 (55%), Positives = 28/34 (82%)
 Frame = +3

Query: 138 VVFNTMFGFSTNFWIATTSRFLLGLVDGMLGPVR 239
           +VFNT+FG ST +W+A  +R LLGL+ G+LGP++
Sbjct: 125 IVFNTLFGLSTTYWMAIVTRGLLGLLCGILGPIK 158



 Score = 34.7 bits (78), Expect(2) = 8e-09
 Identities = 14/22 (63%), Positives = 19/22 (86%)
 Frame = +2

Query: 323 AYASEICTEEYQALGLSMVNES 388
           AYASE+C +E+QALG+S+V  S
Sbjct: 159 AYASEVCRKEHQALGISLVTSS 180


>tr|A2ZRU4|A2ZRU4_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_001266 PE=4 SV=1
          Length = 491

 Score = 48.1 bits (113), Expect(2) = 8e-09
 Identities = 19/34 (55%), Positives = 28/34 (82%)
 Frame = +3

Query: 138 VVFNTMFGFSTNFWIATTSRFLLGLVDGMLGPVR 239
           +VFNT+FG ST +W+A  +R LLGL+ G+LGP++
Sbjct: 125 IVFNTLFGLSTTYWMAIVTRGLLGLLCGILGPIK 158



 Score = 34.7 bits (78), Expect(2) = 8e-09
 Identities = 14/22 (63%), Positives = 19/22 (86%)
 Frame = +2

Query: 323 AYASEICTEEYQALGLSMVNES 388
           AYASE+C +E+QALG+S+V  S
Sbjct: 159 AYASEVCRKEHQALGISLVTSS 180


>tr|B4FYC3|B4FYC3_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 488

 Score = 48.1 bits (113), Expect(2) = 8e-09
 Identities = 19/34 (55%), Positives = 28/34 (82%)
 Frame = +3

Query: 138 VVFNTMFGFSTNFWIATTSRFLLGLVDGMLGPVR 239
           +VFNT+FG ST +W+A  +R LLGL+ G+LGP++
Sbjct: 132 IVFNTLFGLSTTYWMAIVTRGLLGLLCGILGPIK 165



 Score = 34.7 bits (78), Expect(2) = 8e-09
 Identities = 14/22 (63%), Positives = 19/22 (86%)
 Frame = +2

Query: 323 AYASEICTEEYQALGLSMVNES 388
           AYASE+C +E+QALG+S+V  S
Sbjct: 166 AYASEVCRKEHQALGISLVTSS 187


>tr|A7QAK8|A7QAK8_VITVI Chromosome undetermined scaffold_71, whole
           genome shotgun sequence OS=Vitis vinifera
           GN=GSVIVT00033971001 PE=4 SV=1
          Length = 488

 Score = 48.5 bits (114), Expect(2) = 1e-08
 Identities = 19/33 (57%), Positives = 27/33 (81%)
 Frame = +3

Query: 138 VVFNTMFGFSTNFWIATTSRFLLGLVDGMLGPV 236
           V+FNT+FG S N+W+A +SRFLLG +  +LGP+
Sbjct: 118 VIFNTLFGLSLNYWMAISSRFLLGSMSTLLGPI 150



 Score = 33.9 bits (76), Expect(2) = 1e-08
 Identities = 21/44 (47%), Positives = 28/44 (63%)
 Frame = +2

Query: 323 AYASEICTEEYQALGLSMVNESVSLNRFGFLIIISNQGSFGGFI 454
           AYA+EI  EEYQALGLS +N +     +G  +II    + GGF+
Sbjct: 152 AYATEIFREEYQALGLSTINTA-----WGVGLIIG--PALGGFL 188


>tr|A7QAK3|A7QAK3_VITVI Chromosome undetermined scaffold_71, whole
           genome shotgun sequence OS=Vitis vinifera
           GN=GSVIVT00033966001 PE=4 SV=1
          Length = 470

 Score = 48.5 bits (114), Expect(2) = 1e-08
 Identities = 19/33 (57%), Positives = 27/33 (81%)
 Frame = +3

Query: 138 VVFNTMFGFSTNFWIATTSRFLLGLVDGMLGPV 236
           V+FNT+FG S N+W+A +SRFLLG +  +LGP+
Sbjct: 118 VIFNTLFGLSLNYWMAISSRFLLGSMSTLLGPI 150



 Score = 33.9 bits (76), Expect(2) = 1e-08
 Identities = 21/44 (47%), Positives = 28/44 (63%)
 Frame = +2

Query: 323 AYASEICTEEYQALGLSMVNESVSLNRFGFLIIISNQGSFGGFI 454
           AYA+EI  EEYQALGLS +N +     +G  +II    + GGF+
Sbjct: 152 AYATEIFREEYQALGLSTINTA-----WGVGLIIG--PALGGFL 188