BP919449 |
Clone id |
YMU001_000125_C02 |
Library |
YMU01 |
Length |
537 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000125_C02. |
Accession |
BP919449 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL10Contig1 |
Sequence |
ATTCGCGGCCGCGAATTCTTCCAGTTAGATGCTTTCAGCAGTTATCCGCTCCGCACTTGG CTACCCAGCGTTTGCCGCGGGCACGACAACTGGTACACCAGAGGTGCGTCCTTCCCGGTC CTCTCGTACTAGGGAAAGGTCCCCTCAATGCTCTAGCGCCCGCACCGGATATGGACCGAA CTGTCTCACGACGTTCTGAACCCAGCTCACGTACTGCTTTTCGTGGGCGAACAGCCCAAC CCTTGGGACGTACTACCGCCCCAGGTGGCGAAGAGCCGACATCGAGGTGCCAAACCTTCC CGTCGATGTGAACTCTTGGGGAAGATCAGCCTGTTATCCCTAGAGTAACTTTTATCCGTT GAGCGACGGCCCTTCCACTTGGAACCGTCGGATCACTAAGGCCGACTTTCGTCCCTGCTC GACTGGTAGGTCTCGCAGTCAAGCTCCCTTCTGCCTTTGCACTCGTAGGCTGATTTCCGT CCAGCCTGAGGAAACCTTTGCGCGCCTCCGTTACTCTTTGGGAGGCCTACGCCCCAT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9PLI5 |
Definition |
sp|Q9PLI5|Y114_CHLMU Uncharacterized protein TC_0114 OS=Chlamydia muridarum |
Align length |
65 |
Score (bit) |
61.6 |
E-value |
2.0e-09 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q4EE25 |
Definition |
tr|Q4EE25|Q4EE25_LISMO Putative uncharacterized protein OS=Listeria monocytogenes str. 4b H7858 |
Align length |
89 |
Score (bit) |
143.0 |
E-value |
2.0e-39 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP919449|Adiantum capillus-veneris mRNA, clone: YMU001_000125_C02. (511 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q4EE25|Q4EE25_LISMO Putative uncharacterized protein OS=Liste... 143 2e-39 tr|A5ZQM3|A5ZQM3_9FIRM Putative uncharacterized protein OS=Rumin... 144 5e-39 tr|Q848W1|Q848W1_BACME Putative uncharacterized protein OS=Bacil... 127 7e-34 tr|A0Q208|A0Q208_CLONN Putative uncharacterized protein OS=Clost... 142 1e-32 tr|A0PXN7|A0PXN7_CLONN Putative uncharacterized protein OS=Clost... 142 1e-32 tr|B1BEF3|B1BEF3_CLOBO Putative uncharacterized protein (Fragmen... 142 1e-32 tr|B1BEE0|B1BEE0_CLOBO Putative uncharacterized protein OS=Clost... 142 1e-32 tr|B1BE06|B1BE06_CLOBO Putative uncharacterized protein OS=Clost... 142 1e-32 tr|A5ZYK8|A5ZYK8_9FIRM Putative uncharacterized protein OS=Rumin... 122 1e-32 tr|B1QFN6|B1QFN6_CLOBO Putative uncharacterized protein OS=Clost... 139 1e-31 tr|B1QFL7|B1QFL7_CLOBO Putative uncharacterized protein (Fragmen... 139 1e-31 tr|B1RTR7|B1RTR7_CLOPE Putative uncharacterized protein OS=Clost... 138 1e-31 tr|B1RKU9|B1RKU9_CLOPE Putative uncharacterized protein OS=Clost... 138 1e-31 tr|B1RCB4|B1RCB4_CLOPE Putative uncharacterized protein OS=Clost... 138 1e-31 tr|B1BTI8|B1BTI8_CLOPE Putative uncharacterized protein OS=Clost... 138 1e-31 tr|B1BLN6|B1BLN6_CLOPE Putative uncharacterized protein OS=Clost... 138 1e-31 tr|B1BEX7|B1BEX7_CLOPE Putative uncharacterized protein OS=Clost... 138 1e-31 tr|Q877Q8|Q877Q8_CLOTE Putative uncharacterized protein OS=Clost... 135 1e-30 tr|A7DZU9|A7DZU9_CLOSP Hypothetical CTC00065-like protein OS=Clo... 135 1e-30 tr|B5HM15|B5HM15_9ACTO Putative uncharacterized protein OS=Strep... 133 6e-30 tr|B5G7E4|B5G7E4_9ACTO Putative uncharacterized protein OS=Strep... 133 6e-30 tr|B1C1N3|B1C1N3_9FIRM Putative uncharacterized protein OS=Clost... 133 6e-30 tr|B4V362|B4V362_9ACTO Putative uncharacterized protein OS=Strep... 131 2e-29 tr|A8R9P5|A8R9P5_9FIRM Putative uncharacterized protein OS=Eubac... 130 3e-29 tr|B6G1S6|B6G1S6_9CLOT Putative uncharacterized protein OS=Clost... 110 6e-29 tr|B0A9C5|B0A9C5_9CLOT Putative uncharacterized protein OS=Clost... 120 5e-26 tr|B0A7G5|B0A7G5_9CLOT Putative uncharacterized protein OS=Clost... 120 5e-26 tr|B2E6W4|B2E6W4_STRPN Putative uncharacterized protein OS=Strep... 99 1e-25 tr|Q8CQV6|Q8CQV6_STAES Putative uncharacterized protein OS=Staph... 96 1e-24 tr|Q3BKH9|Q3BKH9_9PROT Putative uncharacterized protein OS=Magne... 110 4e-23
>tr|Q4EE25|Q4EE25_LISMO Putative uncharacterized protein OS=Listeria monocytogenes str. 4b H7858 GN=LMOh7858_1903 PE=4 SV=1 Length = 112
Score = 143 bits (361), Expect(2) = 2e-39 Identities = 71/89 (79%), Positives = 75/89 (84%) Frame = -3
Query: 458 LDGNQPTSAKAEGSLTARPTSRAGTKVGLSDPTVPSGRAVAQRIKVTLGITG*SSPRVHI 279 +DGN S KA+GSLTAR TSRAGTKVGLSDP VP GRA+AQRIK T GITG S PRVHI Sbjct: 1 MDGNHSQSVKAQGSLTARLTSRAGTKVGLSDPVVPHGRAIAQRIKATPGITGLSPPRVHI 60
Query: 278 DGKVWHLDVGSSPPGAVVRPKGWAVRPRK 192 DG+VWHLDVGSS PGAVV PKGWAVRP K Sbjct: 61 DGEVWHLDVGSSHPGAVVGPKGWAVRPLK 89
Score = 42.7 bits (99), Expect(2) = 2e-39 Identities = 18/23 (78%), Positives = 20/23 (86%) Frame = -1
Query: 193 KQYVSWVQNVVRQFGPYPVRALE 125 K++ SWVQNVVRQFGPYP RA E Sbjct: 89 KRHASWVQNVVRQFGPYPSRAQE 111
>tr|A5ZQM3|A5ZQM3_9FIRM Putative uncharacterized protein OS=Ruminococcus obeum ATCC 29174 GN=RUMOBE_01295 PE=4 SV=1 Length = 109
Score = 144 bits (362), Expect(2) = 5e-39 Identities = 72/89 (80%), Positives = 74/89 (83%) Frame = -3
Query: 458 LDGNQPTSAKAEGSLTARPTSRAGTKVGLSDPTVPSGRAVAQRIKVTLGITG*SSPRVHI 279 +DGN P SAKAEGSLTA PT AGTKVGLSDP V SG A+AQRIK TLGITG S PRVHI Sbjct: 1 MDGNHPKSAKAEGSLTATPTGGAGTKVGLSDPVVLSGNAIAQRIKATLGITGLSLPRVHI 60
Query: 278 DGKVWHLDVGSSPPGAVVRPKGWAVRPRK 192 DG VWHLDVGSS PGAVV PKGWAVRP K Sbjct: 61 DGVVWHLDVGSSHPGAVVGPKGWAVRPLK 89
Score = 41.2 bits (95), Expect(2) = 5e-39 Identities = 17/21 (80%), Positives = 18/21 (85%) Frame = -1
Query: 193 KQYVSWVQNVVRQFGPYPVRA 131 K+Y SWVQNVVRQFGPYP A Sbjct: 89 KRYASWVQNVVRQFGPYPAWA 109
>tr|Q848W1|Q848W1_BACME Putative uncharacterized protein OS=Bacillus megaterium PE=4 SV=1 Length = 95
Score = 127 bits (318), Expect(2) = 7e-34 Identities = 62/75 (82%), Positives = 65/75 (86%) Frame = -3
Query: 416 LTARPTSRAGTKVGLSDPTVPSGRAVAQRIKVTLGITG*SSPRVHIDGKVWHLDVGSSPP 237 +TAR TSRAGTKVGLSDP VP GRA+AQRIK T GITG S PRVHIDG+VWHLDVGSS P Sbjct: 1 MTARTTSRAGTKVGLSDPVVPHGRAIAQRIKATPGITGLSPPRVHIDGEVWHLDVGSSHP 60
Query: 236 GAVVRPKGWAVRPRK 192 GAVV PKGWAVRP K Sbjct: 61 GAVVGPKGWAVRPLK 75
Score = 40.8 bits (94), Expect(2) = 7e-34 Identities = 16/18 (88%), Positives = 17/18 (94%) Frame = -1
Query: 193 KQYVSWVQNVVRQFGPYP 140 K+Y SWVQNVVRQFGPYP Sbjct: 75 KRYASWVQNVVRQFGPYP 92
>tr|A0Q208|A0Q208_CLONN Putative uncharacterized protein OS=Clostridium novyi (strain NT) GN=NT01CX_0152 PE=4 SV=1 Length = 213
Score = 142 bits (357), Expect = 1e-32 Identities = 69/89 (77%), Positives = 72/89 (80%) Frame = +3
Query: 243 RRADIEVPNLPVDVNSWGRSACYP*SNFYPLSDGPSTWNRRITKADFRPCSTGRSRSQAP 422 RRADIEVPNLPVDV+SWGRSACYP +FYPLSDGPS N RITK DFRPCST RSQAP Sbjct: 2 RRADIEVPNLPVDVDSWGRSACYPRGSFYPLSDGPSIQNHRITKPDFRPCSTCMCRSQAP 61
Query: 423 FCLCTRRLISVQPEETFARLRYSLGGLRP 509 FCLCT R IS + E TF RLRY LGG RP Sbjct: 62 FCLCTLRAISDRAEGTFGRLRYLLGGDRP 90
>tr|A0PXN7|A0PXN7_CLONN Putative uncharacterized protein OS=Clostridium novyi (strain NT) GN=NT01CX_0251 PE=4 SV=1 Length = 213
Score = 142 bits (357), Expect = 1e-32 Identities = 69/89 (77%), Positives = 72/89 (80%) Frame = +3
Query: 243 RRADIEVPNLPVDVNSWGRSACYP*SNFYPLSDGPSTWNRRITKADFRPCSTGRSRSQAP 422 RRADIEVPNLPVDV+SWGRSACYP +FYPLSDGPS N RITK DFRPCST RSQAP Sbjct: 2 RRADIEVPNLPVDVDSWGRSACYPRGSFYPLSDGPSIQNHRITKPDFRPCSTCMCRSQAP 61
Query: 423 FCLCTRRLISVQPEETFARLRYSLGGLRP 509 FCLCT R IS + E TF RLRY LGG RP Sbjct: 62 FCLCTLRAISDRAEGTFGRLRYLLGGDRP 90
>tr|B1BEF3|B1BEF3_CLOBO Putative uncharacterized protein (Fragment) OS=Clostridium botulinum C str. Eklund GN=CBC_A1887 PE=4 SV=1 Length = 107
Score = 142 bits (357), Expect = 1e-32 Identities = 69/89 (77%), Positives = 72/89 (80%) Frame = +3
Query: 243 RRADIEVPNLPVDVNSWGRSACYP*SNFYPLSDGPSTWNRRITKADFRPCSTGRSRSQAP 422 RRADIEVPNLPVDV+SWGRSACYP +FYPLSDGPS N RITK DFRPCST RSQAP Sbjct: 2 RRADIEVPNLPVDVDSWGRSACYPRGSFYPLSDGPSIQNHRITKPDFRPCSTCMCRSQAP 61
Query: 423 FCLCTRRLISVQPEETFARLRYSLGGLRP 509 FCLCT R IS + E TF RLRY LGG RP Sbjct: 62 FCLCTLRAISDRAEGTFGRLRYLLGGDRP 90
>tr|B1BEE0|B1BEE0_CLOBO Putative uncharacterized protein OS=Clostridium botulinum C str. Eklund GN=CBC_A1890 PE=4 SV=1 Length = 210
Score = 142 bits (357), Expect = 1e-32 Identities = 69/89 (77%), Positives = 72/89 (80%) Frame = +3
Query: 243 RRADIEVPNLPVDVNSWGRSACYP*SNFYPLSDGPSTWNRRITKADFRPCSTGRSRSQAP 422 RRADIEVPNLPVDV+SWGRSACYP +FYPLSDGPS N RITK DFRPCST RSQAP Sbjct: 2 RRADIEVPNLPVDVDSWGRSACYPRGSFYPLSDGPSIQNHRITKPDFRPCSTCMCRSQAP 61
Query: 423 FCLCTRRLISVQPEETFARLRYSLGGLRP 509 FCLCT R IS + E TF RLRY LGG RP Sbjct: 62 FCLCTLRAISDRAEGTFGRLRYLLGGDRP 90
>tr|B1BE06|B1BE06_CLOBO Putative uncharacterized protein OS=Clostridium botulinum C str. Eklund GN=CBC_0392 PE=4 SV=1 Length = 213
Score = 142 bits (357), Expect = 1e-32 Identities = 69/89 (77%), Positives = 72/89 (80%) Frame = +3
Query: 243 RRADIEVPNLPVDVNSWGRSACYP*SNFYPLSDGPSTWNRRITKADFRPCSTGRSRSQAP 422 RRADIEVPNLPVDV+SWGRSACYP +FYPLSDGPS N RITK DFRPCST RSQAP Sbjct: 2 RRADIEVPNLPVDVDSWGRSACYPRGSFYPLSDGPSIQNHRITKPDFRPCSTCMCRSQAP 61
Query: 423 FCLCTRRLISVQPEETFARLRYSLGGLRP 509 FCLCT R IS + E TF RLRY LGG RP Sbjct: 62 FCLCTLRAISDRAEGTFGRLRYLLGGDRP 90
>tr|A5ZYK8|A5ZYK8_9FIRM Putative uncharacterized protein OS=Ruminococcus obeum ATCC 29174 GN=RUMOBE_04125 PE=4 SV=1 Length = 108
Score = 122 bits (306), Expect(2) = 1e-32 Identities = 62/80 (77%), Positives = 65/80 (81%) Frame = -3
Query: 431 KAEGSLTARPTSRAGTKVGLSDPTVPSGRAVAQRIKVTLGITG*SSPRVHIDGKVWHLDV 252 ++ GSLTA PT AGTKVGLSDP V SG A+AQRIK TLGITG S PRVHIDG VWHLDV Sbjct: 9 QSRGSLTATPTGGAGTKVGLSDPVVLSGNAIAQRIKATLGITGLSLPRVHIDGVVWHLDV 68
Query: 251 GSSPPGAVVRPKGWAVRPRK 192 GSS PGAVV KGWAVRP K Sbjct: 69 GSSHPGAVVGLKGWAVRPLK 88
Score = 41.2 bits (95), Expect(2) = 1e-32 Identities = 17/21 (80%), Positives = 18/21 (85%) Frame = -1
Query: 193 KQYVSWVQNVVRQFGPYPVRA 131 K+Y SWVQNVVRQFGPYP A Sbjct: 88 KRYASWVQNVVRQFGPYPAWA 108
>tr|B1QFN6|B1QFN6_CLOBO Putative uncharacterized protein OS=Clostridium botulinum NCTC 2916 GN=CBN_0042 PE=4 SV=1 Length = 218
Score = 139 bits (349), Expect = 1e-31 Identities = 68/89 (76%), Positives = 71/89 (79%) Frame = +3
Query: 243 RRADIEVPNLPVDVNSWGRSACYP*SNFYPLSDGPSTWNRRITKADFRPCSTGRSRSQAP 422 RRADIEVPNLPVDV+SWGRSACYP +FYPLSDGP T RITK DFRPCST RSQAP Sbjct: 2 RRADIEVPNLPVDVDSWGRSACYPRGSFYPLSDGPPTRYHRITKPDFRPCSTCMCRSQAP 61
Query: 423 FCLCTRRLISVQPEETFARLRYSLGGLRP 509 FCLCT R IS + E TF RLRY LGG RP Sbjct: 62 FCLCTLRAISDRAEGTFGRLRYFLGGDRP 90
|