| BP919452 |
| Clone id |
YMU001_000125_C05 |
| Library |
YMU01 |
| Length |
466 |
| Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000125_C05. |
| Accession |
BP919452 |
| Tissue type |
prothallium |
| Developmental stage |
- |
| Contig ID |
CL906Contig1 |
| Sequence |
CTGGATCCTTACCTCTTCGTCGCCGCTCTTCATCAGTCCTCGGCCACATTATTTTTACAC
TTGCTATGGGGCCAAACCGTCCAAAAGTTCGCAGTAGAAAGTTCTCATCAACCTGAGGTG
CTAGGTTGCCAACATATAAATTTGTGGTCTGAGGATCTCCATCATCAAACGATCCTGGCA
GTTTCCCATCGAGATCTTCTAGCAACTCATCAAATCGAGTGGGAGGACTTAAATTTCCTT
TTTGCCTGCTTTCACGGCTTCGATATTCTCGATCCAGGCTCCTTTTTTCTCTCATCTCTT
GTTCCATCTTCAATTCTTCCATGAAGTGATCAATGTTACGTGATTTCGTTCGATCTCTTT
CTTTGCGCTTCTCCTCCTCTTTCTTTCTCTCAGGTTCCTTGGCACTGTTAACAACTGCAG
CCAATCCAGNGGGGATGAAAGAAGGAACATACCTGCTCCCAGGCTT |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
O15042 |
| Definition |
sp|O15042|SR140_HUMAN U2-associated protein SR140 OS=Homo sapiens |
| Align length |
114 |
| Score (bit) |
105.0 |
| E-value |
1.0e-22 |
| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BP919452|Adiantum capillus-veneris mRNA, clone:
YMU001_000125_C05.
(466 letters)
Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|O15042|SR140_HUMAN U2-associated protein SR140 OS=Homo sapien... 105 1e-22
sp|Q6NV83|SR140_MOUSE U2-associated protein SR140 OS=Mus musculu... 105 1e-22
sp|Q5R7X2|SR140_PONAB U2-associated protein SR140 OS=Pongo abeli... 102 8e-22
sp|P70318|TIAR_MOUSE Nucleolysin TIAR OS=Mus musculus GN=Tial1 P... 41 0.002
sp|A5DM21|PABP_PICGU Polyadenylate-binding protein, cytoplasmic ... 41 0.002
sp|Q2GSX8|PABP_CHAGB Polyadenylate-binding protein, cytoplasmic ... 41 0.003
sp|Q9EPH8|PABP1_RAT Polyadenylate-binding protein 1 OS=Rattus no... 40 0.004
sp|P29341|PABP1_MOUSE Polyadenylate-binding protein 1 OS=Mus mus... 40 0.004
sp|O64380|PABP3_ARATH Polyadenylate-binding protein 3 OS=Arabido... 40 0.005
sp|Q01085|TIAR_HUMAN Nucleolysin TIAR OS=Homo sapiens GN=TIAL1 P... 40 0.007
sp|Q5R8F7|PABP1_PONAB Polyadenylate-binding protein 1 OS=Pongo a... 40 0.007
sp|P11940|PABP1_HUMAN Polyadenylate-binding protein 1 OS=Homo sa... 40 0.007
sp|P61286|PABP1_BOVIN Polyadenylate-binding protein 1 OS=Bos tau... 40 0.007
sp|A1CRM1|PABP_ASPCL Polyadenylate-binding protein, cytoplasmic ... 39 0.015
sp|A4QUF0|PABP_MAGGR Polyadenylate-binding protein, cytoplasmic ... 38 0.019
sp|Q05196|PABP5_ARATH Polyadenylate-binding protein 5 OS=Arabido... 38 0.025
sp|Q9H361|PABP3_HUMAN Polyadenylate-binding protein 3 OS=Homo sa... 38 0.025
sp|P31209|PABP_SCHPO Polyadenylate-binding protein, cytoplasmic ... 37 0.033
sp|Q09442|SF3B4_CAEEL Splicing factor 3B subunit 4 OS=Caenorhabd... 37 0.056
sp|Q7S6N6|PABP_NEUCR Polyadenylate-binding protein, cytoplasmic ... 37 0.056
sp|P32831|NGR1_YEAST Negative growth regulatory protein NGR1 OS=... 37 0.056
sp|Q60899|ELAV2_MOUSE ELAV-like protein 2 OS=Mus musculus GN=Ela... 37 0.056
sp|P21187|PABP_DROME Polyadenylate-binding protein OS=Drosophila... 36 0.073
sp|Q5KBW2|PABP_CRYNE Polyadenylate-binding protein, cytoplasmic ... 36 0.073
sp|Q2UK72|PABP_ASPOR Polyadenylate-binding protein, cytoplasmic ... 36 0.073
sp|P20965|PABPA_XENLA Polyadenylate-binding protein 1-A OS=Xenop... 36 0.073
sp|Q8CH84|ELAV2_RAT ELAV-like protein 2 OS=Rattus norvegicus GN=... 36 0.073
sp|Q5R9Z6|ELAV2_PONAB ELAV-like protein 2 OS=Pongo abelii GN=ELA... 36 0.073
sp|Q12926|ELAV2_HUMAN ELAV-like protein 2 OS=Homo sapiens GN=ELA... 36 0.073
sp|Q5B630|PABP_EMENI Polyadenylate-binding protein, cytoplasmic ... 36 0.095
>sp|O15042|SR140_HUMAN U2-associated protein SR140 OS=Homo sapiens
GN=SR140 PE=1 SV=2
Length = 1029
Score = 105 bits (262), Expect = 1e-22
Identities = 56/114 (49%), Positives = 72/114 (63%), Gaps = 7/114 (6%)
Frame = -1
Query: 337 NIDHFMEELKMEQEMREKRSLDREYRSR-------ESRQKGNLSPPTRFDELLEDLDGKL 179
N++ F EELK QE R++R + SR Q+ ++ P+R + LD
Sbjct: 203 NLELFKEELKQIQEERDERHKTKGRLSRFEPPQSDSDGQRRSMDAPSRRNRSSGVLDDYA 262
Query: 178 PGSFDDGDPQTTNLYVGNLAPQVDENFLLRTFGRFGPIASVKIMWPRTDEERRR 17
PGS D GDP TTNLY+GN+ PQ++E L + FGRFGP+ASVKIMWPRTDEER R
Sbjct: 263 PGSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERAR 316
>sp|Q6NV83|SR140_MOUSE U2-associated protein SR140 OS=Mus musculus
GN=Sr140 PE=2 SV=2
Length = 1029
Score = 105 bits (261), Expect = 1e-22
Identities = 56/114 (49%), Positives = 72/114 (63%), Gaps = 7/114 (6%)
Frame = -1
Query: 337 NIDHFMEELKMEQEMREKRSLDREYRSR-------ESRQKGNLSPPTRFDELLEDLDGKL 179
N++ F EELK QE R++R + SR Q+ ++ P+R + LD
Sbjct: 203 NLELFKEELKQIQEERDERHKTKGRLSRFEPPQSDSDGQRRSMDVPSRRNRSSGVLDDYA 262
Query: 178 PGSFDDGDPQTTNLYVGNLAPQVDENFLLRTFGRFGPIASVKIMWPRTDEERRR 17
PGS D GDP TTNLY+GN+ PQ++E L + FGRFGP+ASVKIMWPRTDEER R
Sbjct: 263 PGSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERAR 316
>sp|Q5R7X2|SR140_PONAB U2-associated protein SR140 OS=Pongo abelii
GN=SR140 PE=2 SV=1
Length = 1028
Score = 102 bits (254), Expect = 8e-22
Identities = 56/114 (49%), Positives = 72/114 (63%), Gaps = 7/114 (6%)
Frame = -1
Query: 337 NIDHFMEELKMEQEMREKRSLDREYRSR-------ESRQKGNLSPPTRFDELLEDLDGKL 179
N++ F EELK QE R++R + SR Q+ ++ P+R + LD
Sbjct: 203 NLELFKEELKQIQEERDERHKTKGRLSRFEPPQSDSDGQRRSMDAPSRRNRS-SVLDDYA 261
Query: 178 PGSFDDGDPQTTNLYVGNLAPQVDENFLLRTFGRFGPIASVKIMWPRTDEERRR 17
PGS D GDP TTNLY+GN+ PQ++E L + FGRFGP+ASVKIMWPRTDEER R
Sbjct: 262 PGSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERAR 315
>sp|P70318|TIAR_MOUSE Nucleolysin TIAR OS=Mus musculus GN=Tial1 PE=2
SV=1
Length = 392
Score = 41.2 bits (95), Expect = 0.002
Identities = 21/48 (43%), Positives = 29/48 (60%)
Frame = -1
Query: 166 DDGDPQTTNLYVGNLAPQVDENFLLRTFGRFGPIASVKIMWPRTDEER 23
DDG P+T LYVGNL+ V E +L+ F + GP S K++ + D R
Sbjct: 4 DDGQPRT--LYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRR 49
>sp|A5DM21|PABP_PICGU Polyadenylate-binding protein, cytoplasmic and
nuclear OS=Pichia guilliermondii GN=PAB1 PE=3 SV=2
Length = 631
Score = 41.2 bits (95), Expect = 0.002
Identities = 22/53 (41%), Positives = 30/53 (56%)
Frame = -1
Query: 169 FDDGDPQTTNLYVGNLAPQVDENFLLRTFGRFGPIASVKIMWPRTDEERRRRG 11
F++ TN+YV NLAP+VD F FGP+ SV + TD+E + RG
Sbjct: 231 FEEMKANFTNVYVKNLAPEVDNAKFEEIFKPFGPVTSVHL---ETDQEGKSRG 280
>sp|Q2GSX8|PABP_CHAGB Polyadenylate-binding protein, cytoplasmic and
nuclear OS=Chaetomium globosum GN=PAB1 PE=3 SV=1
Length = 783
Score = 40.8 bits (94), Expect = 0.003
Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Frame = -1
Query: 151 QTTNLYVGNLAPQVDENFLLRTFGRFGPIASVKIMWPRTDE---ERRRRGKD 5
Q NLY+ NLA +D++ L + F +GPI S K+M E E GKD
Sbjct: 347 QGVNLYIKNLADDIDDDKLRQMFSEYGPITSAKVMRDAVTEGSAEEETEGKD 398
>sp|Q9EPH8|PABP1_RAT Polyadenylate-binding protein 1 OS=Rattus
norvegicus GN=Pabpc1 PE=2 SV=1
Length = 636
Score = 40.4 bits (93), Expect = 0.004
Identities = 19/45 (42%), Positives = 27/45 (60%)
Frame = -1
Query: 145 TNLYVGNLAPQVDENFLLRTFGRFGPIASVKIMWPRTDEERRRRG 11
TN+Y+ N +D+ L FG+FGP SVK+M TDE + +G
Sbjct: 191 TNVYIKNFGEDMDDERLKELFGKFGPALSVKVM---TDESGKSKG 232
Score = 33.1 bits (74), Expect = 0.62
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = -1
Query: 151 QTTNLYVGNLAPQVDENFLLRTFGRFGPIASVKIM 47
Q NLYV NL +D+ L + F FG I S K+M
Sbjct: 292 QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVM 326
Score = 31.6 bits (70), Expect = 1.8
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -1
Query: 142 NLYVGNLAPQVDENFLLRTFGRFGPIASVKI 50
+LYVG+L P V E L F GPI S+++
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRV 42
>sp|P29341|PABP1_MOUSE Polyadenylate-binding protein 1 OS=Mus
musculus GN=Pabpc1 PE=1 SV=1
Length = 636
Score = 40.4 bits (93), Expect = 0.004
Identities = 19/45 (42%), Positives = 27/45 (60%)
Frame = -1
Query: 145 TNLYVGNLAPQVDENFLLRTFGRFGPIASVKIMWPRTDEERRRRG 11
TN+Y+ N +D+ L FG+FGP SVK+M TDE + +G
Sbjct: 191 TNVYIKNFGEDMDDERLKELFGKFGPALSVKVM---TDESGKSKG 232
Score = 33.1 bits (74), Expect = 0.62
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = -1
Query: 151 QTTNLYVGNLAPQVDENFLLRTFGRFGPIASVKIM 47
Q NLYV NL +D+ L + F FG I S K+M
Sbjct: 292 QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVM 326
Score = 31.6 bits (70), Expect = 1.8
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -1
Query: 142 NLYVGNLAPQVDENFLLRTFGRFGPIASVKI 50
+LYVG+L P V E L F GPI S+++
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRV 42
>sp|O64380|PABP3_ARATH Polyadenylate-binding protein 3
OS=Arabidopsis thaliana GN=PAB3 PE=2 SV=1
Length = 660
Score = 40.0 bits (92), Expect = 0.005
Identities = 18/44 (40%), Positives = 29/44 (65%)
Frame = -1
Query: 154 PQTTNLYVGNLAPQVDENFLLRTFGRFGPIASVKIMWPRTDEER 23
P+ TN+YV NL ++ E+ L +TFG+FG I+S +M ++ R
Sbjct: 226 PRFTNVYVKNLPKEIGEDELRKTFGKFGVISSAVVMRDQSGNSR 269
Score = 30.4 bits (67), Expect = 4.0
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -1
Query: 151 QTTNLYVGNLAPQVDENFLLRTFGRFGPIASVKIM 47
Q NLY+ NL VD+ L F +G + S K+M
Sbjct: 330 QGANLYLKNLDDSVDDEKLKEMFSEYGNVTSSKVM 364
>sp|Q01085|TIAR_HUMAN Nucleolysin TIAR OS=Homo sapiens GN=TIAL1 PE=1
SV=1
Length = 375
Score = 39.7 bits (91), Expect = 0.007
Identities = 20/47 (42%), Positives = 28/47 (59%)
Frame = -1
Query: 166 DDGDPQTTNLYVGNLAPQVDENFLLRTFGRFGPIASVKIMWPRTDEE 26
DDG P+T LYVGNL+ V E +L+ F + GP S K++ T +
Sbjct: 4 DDGQPRT--LYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSND 48
|
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
A5BQS1 |
| Definition |
tr|A5BQS1|A5BQS1_VITVI Putative uncharacterized protein OS=Vitis vinifera |
| Align length |
153 |
| Score (bit) |
184.0 |
| E-value |
3.0e-45 |
| Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BP919452|Adiantum capillus-veneris mRNA, clone:
YMU001_000125_C05.
(466 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|A5BQS1|A5BQS1_VITVI Putative uncharacterized protein OS=Vitis... 184 3e-45
tr|A7P661|A7P661_VITVI Chromosome chr4 scaffold_6, whole genome ... 180 4e-44
tr|A9TAZ0|A9TAZ0_PHYPA Predicted protein OS=Physcomitrella paten... 169 6e-41
tr|Q9C5J3|Q9C5J3_ARATH Putative uncharacterized protein At5g2506... 168 1e-40
tr|A9SYF0|A9SYF0_PHYPA Predicted protein OS=Physcomitrella paten... 166 5e-40
tr|Q6ETK6|Q6ETK6_ORYSJ Putative U2-associated SR140 protein OS=O... 164 3e-39
tr|B8AIW7|B8AIW7_ORYSI Putative uncharacterized protein OS=Oryza... 164 3e-39
tr|A3A3S9|A3A3S9_ORYSJ Putative uncharacterized protein OS=Oryza... 164 3e-39
tr|Q6ETK5|Q6ETK5_ORYSJ RNA recognition motif (RRM)-containing pr... 157 3e-37
tr|Q9LEV9|Q9LEV9_ARATH Putative uncharacterized protein T30N20_7... 138 2e-31
tr|B4DK81|B4DK81_HUMAN cDNA FLJ60621 OS=Homo sapiens PE=2 SV=1 105 1e-21
tr|B5DEC9|B5DEC9_XENTR Putative uncharacterized protein OS=Xenop... 102 1e-20
tr|B0S5J4|B0S5J4_DANRE Novel protein similar to vertebrate U2-as... 100 6e-20
tr|Q4S4Z8|Q4S4Z8_TETNG Chromosome 6 SCAF14737, whole genome shot... 99 1e-19
tr|B0S5J3|B0S5J3_DANRE Novel protein similar to vertebrate U2-as... 99 1e-19
tr|B3RIF0|B3RIF0_TRIAD Putative uncharacterized protein OS=Trich... 96 7e-19
tr|B6P0I3|B6P0I3_BRAFL Putative uncharacterized protein OS=Branc... 94 3e-18
tr|Q16N86|Q16N86_AEDAE Gar2, putative (Fragment) OS=Aedes aegypt... 93 6e-18
tr|B4H4Z0|B4H4Z0_DROPE GL10142 OS=Drosophila persimilis GN=GL101... 93 6e-18
tr|Q28X33|Q28X33_DROPS GA21718 OS=Drosophila pseudoobscura pseud... 93 8e-18
tr|B0X5E1|B0X5E1_CULQU U2-associated SR140 protein OS=Culex quin... 93 8e-18
tr|B4J8Q1|B4J8Q1_DROGR GH20523 OS=Drosophila grimshawi GN=GH2052... 92 1e-17
tr|Q9W2N6|Q9W2N6_DROME CG9346 OS=Drosophila melanogaster GN=CG93... 92 1e-17
tr|Q7Q7V4|Q7Q7V4_ANOGA AGAP005006-PA OS=Anopheles gambiae GN=AGA... 92 1e-17
tr|Q7K0X5|Q7K0X5_DROME LD23810p (Fragment) OS=Drosophila melanog... 92 1e-17
tr|B4P9J7|B4P9J7_DROYA GE12157 OS=Drosophila yakuba GN=GE12157 P... 92 1e-17
tr|A8J7H0|A8J7H0_CHLRE Predicted protein OS=Chlamydomonas reinha... 92 2e-17
tr|B4LQ74|B4LQ74_DROVI GJ21992 OS=Drosophila virilis GN=GJ21992 ... 92 2e-17
tr|B4QFK4|B4QFK4_DROSI GD11555 OS=Drosophila simulans GN=GD11555... 91 2e-17
tr|B4I7H9|B4I7H9_DROSE GM15794 OS=Drosophila sechellia GN=GM1579... 91 2e-17
>tr|A5BQS1|A5BQS1_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_025939 PE=4 SV=1
Length = 1384
Score = 184 bits (466), Expect = 3e-45
Identities = 100/153 (65%), Positives = 113/153 (73%), Gaps = 2/153 (1%)
Frame = -1
Query: 466 KPGSRYVPSFIPXGLAAVVNSAXXXXXXXXXXXXXXXXXXXXRNIDHFMEELKMEQEMRE 287
K GSRYVPSFIP LAA RNIDHFMEELK EQEMRE
Sbjct: 200 KKGSRYVPSFIPPPLAA---KGXEPDKKKEEEKPKEREKGKSRNIDHFMEELKHEQEMRE 256
Query: 286 KRSLDREYRSRESRQKGNLSPPTRFDELLEDLD--GKLPGSFDDGDPQTTNLYVGNLAPQ 113
+R+ +R+ + R+ R + +PP+RFDEL +D D GKLPGSFDDGDPQTTNLYVGNL+PQ
Sbjct: 257 RRNQERD-QWRDGRHNDSSAPPSRFDELPDDFDPSGKLPGSFDDGDPQTTNLYVGNLSPQ 315
Query: 112 VDENFLLRTFGRFGPIASVKIMWPRTDEERRRR 14
VDENFLLRTFGRFGPIASVKIMWPRT+EERRR+
Sbjct: 316 VDENFLLRTFGRFGPIASVKIMWPRTEEERRRQ 348
>tr|A7P661|A7P661_VITVI Chromosome chr4 scaffold_6, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00032794001
PE=4 SV=1
Length = 928
Score = 180 bits (456), Expect = 4e-44
Identities = 98/153 (64%), Positives = 111/153 (72%), Gaps = 2/153 (1%)
Frame = -1
Query: 466 KPGSRYVPSFIPXGLAAVVNSAXXXXXXXXXXXXXXXXXXXXRNIDHFMEELKMEQEMRE 287
K GSRYVPSFIP LAA RNIDHFMEELK EQEMRE
Sbjct: 82 KKGSRYVPSFIPPPLAA---KGKEPDKKKEEEKPKEREKGKSRNIDHFMEELKHEQEMRE 138
Query: 286 KRSLDREYRSRESRQKGNLSPPTRFDELLEDLD--GKLPGSFDDGDPQTTNLYVGNLAPQ 113
+R+ +R+ + R+ R + + P+RFDEL +D D GKLPGSFDDGDPQTTNLYVGNL+PQ
Sbjct: 139 RRNQERD-QWRDGRHNDSSALPSRFDELPDDFDPSGKLPGSFDDGDPQTTNLYVGNLSPQ 197
Query: 112 VDENFLLRTFGRFGPIASVKIMWPRTDEERRRR 14
VDENFLLRTFGRFGPIASVKIMWPRT+EERRR+
Sbjct: 198 VDENFLLRTFGRFGPIASVKIMWPRTEEERRRQ 230
>tr|A9TAZ0|A9TAZ0_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_193248 PE=4 SV=1
Length = 990
Score = 169 bits (428), Expect = 6e-41
Identities = 95/153 (62%), Positives = 103/153 (67%), Gaps = 2/153 (1%)
Frame = -1
Query: 466 KPGSRYVPSFIPXGLAAVVNSAXXXXXXXXXXXXXXXXXXXXRNIDHFMEELKMEQEMRE 287
KPGSRYVPSFIP GLAA+VN RNI HFMEELK EQE R+
Sbjct: 82 KPGSRYVPSFIPPGLAAMVNRDKDSEKRRDEEQPKDRDRGTSRNIHHFMEELKREQEARD 141
Query: 286 KRSLDREYR--SRESRQKGNLSPPTRFDELLEDLDGKLPGSFDDGDPQTTNLYVGNLAPQ 113
R+ +RE R R S+ G + DLD K GSFD+GDPQTTNLYVGNLAPQ
Sbjct: 142 TRTAERENRRNDRRSQSSGIADQMIMGLDDAGDLDDKF-GSFDEGDPQTTNLYVGNLAPQ 200
Query: 112 VDENFLLRTFGRFGPIASVKIMWPRTDEERRRR 14
VDENFLLRTFGRFGPIASVKIMWPRTDEERRR+
Sbjct: 201 VDENFLLRTFGRFGPIASVKIMWPRTDEERRRQ 233
>tr|Q9C5J3|Q9C5J3_ARATH Putative uncharacterized protein At5g25060
OS=Arabidopsis thaliana GN=At5g25060 PE=1 SV=1
Length = 946
Score = 168 bits (426), Expect = 1e-40
Identities = 92/152 (60%), Positives = 107/152 (70%), Gaps = 1/152 (0%)
Frame = -1
Query: 466 KPGSRYVPSFIPXGLAAVVNSAXXXXXXXXXXXXXXXXXXXXRNIDHFMEELKMEQEMRE 287
K GSRYVPSF+P LA+ RNID+FMEELK EQEMRE
Sbjct: 81 KKGSRYVPSFLPPPLAS---KGKEPEKKREEERPREREKGKTRNIDNFMEELKREQEMRE 137
Query: 286 KRSLDREYRSRESRQKGNLSPPTRFDELLEDLDGK-LPGSFDDGDPQTTNLYVGNLAPQV 110
+R+ DR+ ++G+ SP +RFDEL +D D PGSFDDGDPQTTNLYVGNL+P+V
Sbjct: 138 RRNQDRD-------RQGDSSPSSRFDELPDDFDPSGRPGSFDDGDPQTTNLYVGNLSPKV 190
Query: 109 DENFLLRTFGRFGPIASVKIMWPRTDEERRRR 14
DENFLLRTFGRFGPIASVKIMWPRTDEE+RR+
Sbjct: 191 DENFLLRTFGRFGPIASVKIMWPRTDEEKRRQ 222
>tr|A9SYF0|A9SYF0_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_234486 PE=4 SV=1
Length = 990
Score = 166 bits (420), Expect = 5e-40
Identities = 93/148 (62%), Positives = 100/148 (67%), Gaps = 2/148 (1%)
Frame = -1
Query: 451 YVPSFIPXGLAAVVNSAXXXXXXXXXXXXXXXXXXXXRNIDHFMEELKMEQEMREKRSLD 272
YVPSFIP GLAA+VN RNIDHFMEELK EQE R+KR+ +
Sbjct: 76 YVPSFIPPGLAAMVNKEKEPEKRRDEERSKDRDRGKSRNIDHFMEELKREQEARDKRTAE 135
Query: 271 REYR--SRESRQKGNLSPPTRFDELLEDLDGKLPGSFDDGDPQTTNLYVGNLAPQVDENF 98
RE R R S G + DLD KL GSFD+GDPQTTNLYVGNLAPQVDENF
Sbjct: 136 RENRRNDRRSLNSGMSDQMMMGPDESGDLDDKL-GSFDEGDPQTTNLYVGNLAPQVDENF 194
Query: 97 LLRTFGRFGPIASVKIMWPRTDEERRRR 14
LLRTFGRFGPIASVKIMWPRTDEERRR+
Sbjct: 195 LLRTFGRFGPIASVKIMWPRTDEERRRQ 222
>tr|Q6ETK6|Q6ETK6_ORYSJ Putative U2-associated SR140 protein
OS=Oryza sativa subsp. japonica GN=P0544B02.29-2 PE=4
SV=1
Length = 954
Score = 164 bits (414), Expect = 3e-39
Identities = 88/153 (57%), Positives = 105/153 (68%), Gaps = 2/153 (1%)
Frame = -1
Query: 466 KPGSRYVPSFIPXGLAAVVNSAXXXXXXXXXXXXXXXXXXXXRNIDHFMEELKMEQEMRE 287
K GSRYVPSF+P + ID FMEELK E+E+R+
Sbjct: 76 KKGSRYVPSFLPPSFGKEPDKKKEEERPKEKERRKPRV------IDEFMEELKFEKELRQ 129
Query: 286 KRSLDREYRSRESRQKGNLSPPTRFDELLEDLD--GKLPGSFDDGDPQTTNLYVGNLAPQ 113
KR+ +RE + RE R + +RFDEL ++LD GKLPGSFDDGDPQTTNLYVGNL+P+
Sbjct: 130 KRNQERE-QWREGRHTDTSASSSRFDELPDELDPIGKLPGSFDDGDPQTTNLYVGNLSPK 188
Query: 112 VDENFLLRTFGRFGPIASVKIMWPRTDEERRRR 14
VDENFL+RTFGRFGPIASVKIMWPRT+EERRR+
Sbjct: 189 VDENFLMRTFGRFGPIASVKIMWPRTEEERRRQ 221
>tr|B8AIW7|B8AIW7_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_06097 PE=4 SV=1
Length = 997
Score = 164 bits (414), Expect = 3e-39
Identities = 88/153 (57%), Positives = 105/153 (68%), Gaps = 2/153 (1%)
Frame = -1
Query: 466 KPGSRYVPSFIPXGLAAVVNSAXXXXXXXXXXXXXXXXXXXXRNIDHFMEELKMEQEMRE 287
K GSRYVPSF+P + ID FMEELK E+E+R+
Sbjct: 103 KKGSRYVPSFLPPSFGKEPDKKKEEERPKEKERRKPRV------IDEFMEELKFEKELRQ 156
Query: 286 KRSLDREYRSRESRQKGNLSPPTRFDELLEDLD--GKLPGSFDDGDPQTTNLYVGNLAPQ 113
KR+ +RE + RE R + +RFDEL ++LD GKLPGSFDDGDPQTTNLYVGNL+P+
Sbjct: 157 KRNQERE-QWREGRHTDTSASSSRFDELPDELDPIGKLPGSFDDGDPQTTNLYVGNLSPK 215
Query: 112 VDENFLLRTFGRFGPIASVKIMWPRTDEERRRR 14
VDENFL+RTFGRFGPIASVKIMWPRT+EERRR+
Sbjct: 216 VDENFLMRTFGRFGPIASVKIMWPRTEEERRRQ 248
>tr|A3A3S9|A3A3S9_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_005451 PE=3 SV=1
Length = 1379
Score = 164 bits (414), Expect = 3e-39
Identities = 88/153 (57%), Positives = 105/153 (68%), Gaps = 2/153 (1%)
Frame = -1
Query: 466 KPGSRYVPSFIPXGLAAVVNSAXXXXXXXXXXXXXXXXXXXXRNIDHFMEELKMEQEMRE 287
K GSRYVPSF+P + ID FMEELK E+E+R+
Sbjct: 96 KKGSRYVPSFLPPSFGKEPDKKKEEERPKEKERRKPRV------IDEFMEELKFEKELRQ 149
Query: 286 KRSLDREYRSRESRQKGNLSPPTRFDELLEDLD--GKLPGSFDDGDPQTTNLYVGNLAPQ 113
KR+ +RE + RE R + +RFDEL ++LD GKLPGSFDDGDPQTTNLYVGNL+P+
Sbjct: 150 KRNQERE-QWREGRHTDTSASSSRFDELPDELDPIGKLPGSFDDGDPQTTNLYVGNLSPK 208
Query: 112 VDENFLLRTFGRFGPIASVKIMWPRTDEERRRR 14
VDENFL+RTFGRFGPIASVKIMWPRT+EERRR+
Sbjct: 209 VDENFLMRTFGRFGPIASVKIMWPRTEEERRRQ 241
>tr|Q6ETK5|Q6ETK5_ORYSJ RNA recognition motif (RRM)-containing
protein-like OS=Oryza sativa subsp. japonica
GN=P0544B02.29-1 PE=4 SV=1
Length = 589
Score = 157 bits (397), Expect = 3e-37
Identities = 78/109 (71%), Positives = 93/109 (85%), Gaps = 2/109 (1%)
Frame = -1
Query: 334 IDHFMEELKMEQEMREKRSLDREYRSRESRQKGNLSPPTRFDELLEDLD--GKLPGSFDD 161
ID FMEELK E+E+R+KR+ +RE + RE R + +RFDEL ++LD GKLPGSFDD
Sbjct: 73 IDEFMEELKFEKELRQKRNQERE-QWREGRHTDTSASSSRFDELPDELDPIGKLPGSFDD 131
Query: 160 GDPQTTNLYVGNLAPQVDENFLLRTFGRFGPIASVKIMWPRTDEERRRR 14
GDPQTTNLYVGNL+P+VDENFL+RTFGRFGPIASVKIMWPRT+EERRR+
Sbjct: 132 GDPQTTNLYVGNLSPKVDENFLMRTFGRFGPIASVKIMWPRTEEERRRQ 180
>tr|Q9LEV9|Q9LEV9_ARATH Putative uncharacterized protein T30N20_70
OS=Arabidopsis thaliana GN=T30N20_70 PE=4 SV=1
Length = 957
Score = 138 bits (347), Expect = 2e-31
Identities = 75/109 (68%), Positives = 87/109 (79%), Gaps = 2/109 (1%)
Frame = -1
Query: 337 NIDHFMEELKMEQEMREKRSLDREYRSRESRQKGNLSPPTRFDELLEDLD--GKLPGSFD 164
NIDHF+EELK EQE+RE+R+ DRE SR+ S +RFDEL + D G+L GS D
Sbjct: 109 NIDHFVEELKREQEIRERRNQDRE-NSRDHNSDNTSS--SRFDELPDYFDPSGRL-GSLD 164
Query: 163 DGDPQTTNLYVGNLAPQVDENFLLRTFGRFGPIASVKIMWPRTDEERRR 17
DGDPQTTNLYV NL+ +VDENFLLRTFGRFGPIASVKIMWPRT+EE+RR
Sbjct: 165 DGDPQTTNLYVVNLSSKVDENFLLRTFGRFGPIASVKIMWPRTEEEKRR 213
|