BP919456 |
Clone id |
YMU001_000125_C09 |
Library |
YMU01 |
Length |
316 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000125_C09. |
Accession |
BP919456 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
CCTGCAGGTTTAACGAATTCGCCCTGAGATATTACCTGCAGGTACTCCAGATAAATGCCA ACACAGCTTTCAAGAACATAAGCAGGTGATTCAAAAGTCAGCCATGATATCCCATCCCGA CTTCAATAAACCTTTCCTATTGCAAACCGACGCATCAAACCAAGGTTTAGAAGCTACATT ATTGCAGCAAGATTCCAGTAGCAGATGGCATCCAATTTCTTTCATAAGCAGAGCTTTAAC AGCTGCAGAACAAAATTATGCAACTACAGAGAAAGAACTTTTAGCAATTGTCTGGGCATT TACAAAGTTCCATCCA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8I7P9 |
Definition |
sp|Q8I7P9|POL5_DROME Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster |
Align length |
89 |
Score (bit) |
77.0 |
E-value |
3.0e-14 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q9XZR7 |
Definition |
tr|Q9XZR7|Q9XZR7_DROBU Protease, reverse transcriptase, ribonuclease H, integrase (Fragment) OS=Drosophila buzzatii |
Align length |
86 |
Score (bit) |
80.9 |
E-value |
3.0e-14 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP919456|Adiantum capillus-veneris mRNA, clone: YMU001_000125_C09. (291 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q9XZR7|Q9XZR7_DROBU Protease, reverse transcriptase, ribonucl... 81 3e-14 tr|O46115|O46115_DROME Protease (Reverse transcriptase) (Rnase h... 78 2e-13 tr|Q5BN17|Q5BN17_DROME Reverse transcriptase OS=Drosophila melan... 78 3e-13 tr|Q7M3L4|Q7M3L4_DROBU Putative uncharacterized protein 2 (Clone... 77 4e-13 tr|B4ISU8|B4ISU8_DROYA GE11339 OS=Drosophila yakuba GN=GE11339 P... 77 6e-13 tr|B4HCK7|B4HCK7_DROPE GL14157 OS=Drosophila persimilis GN=GL141... 77 6e-13 tr|B5DU21|B5DU21_DROPS GA23283 OS=Drosophila pseudoobscura pseud... 76 7e-13 tr|B5DSQ4|B5DSQ4_DROPS GA27703 OS=Drosophila pseudoobscura pseud... 76 1e-12 tr|Q2R1M0|Q2R1M0_ORYSJ Os11g0600000 protein OS=Oryza sativa subs... 75 1e-12 tr|Q2QUM2|Q2QUM2_ORYSJ Retrotransposon protein, putative, unclas... 75 2e-12 tr|Q8UUM8|Q8UUM8_ORYLA LReO_3 protein OS=Oryzias latipes GN=LReO... 75 2e-12 tr|B4N7U3|B4N7U3_DROWI GK16088 OS=Drosophila willistoni GN=GK160... 74 3e-12 tr|B4LA45|B4LA45_DROMO GI11945 OS=Drosophila mojavensis GN=GI119... 74 3e-12 tr|B4IMP8|B4IMP8_DROSE GM24059 OS=Drosophila sechellia GN=GM2405... 74 5e-12 tr|Q8IT56|Q8IT56_DROME Pol protein OS=Drosophila melanogaster GN... 73 6e-12 tr|Q17318|Q17318_CERCA Pol-like protein (Fragment) OS=Ceratitis ... 73 6e-12 tr|B4IN24|B4IN24_DROSE GM19302 OS=Drosophila sechellia GN=GM1930... 73 8e-12 tr|Q4EA25|Q4EA25_9RICK Pol protein (Fragment) OS=Wolbachia endos... 72 1e-11 tr|Q0GA04|Q0GA04_DROME Pol protein OS=Drosophila melanogaster PE... 72 1e-11 tr|Q0GA01|Q0GA01_DROME Pol protein OS=Drosophila melanogaster PE... 72 1e-11 tr|O44384|O44384_DROME Prgag-pol OS=Drosophila melanogaster GN=p... 72 1e-11 tr|A5YVI0|A5YVI0_DROME Pol protein (Fragment) OS=Drosophila mela... 72 1e-11 tr|A5YVH7|A5YVH7_DROME Pol protein (Fragment) OS=Drosophila mela... 72 1e-11 tr|Q9BMP4|Q9BMP4_DROME Pol polyprotein OS=Drosophila melanogaste... 72 1e-11 tr|Q967S6|Q967S6_DROME Reverse transcriptase-like polymerase (Fr... 72 1e-11 tr|Q8ITE3|Q8ITE3_SOLIN Reverse transcriptase/RNaseH (Fragment) O... 72 1e-11 tr|B7QGW2|B7QGW2_IXOSC Polyprotein of retroviral origin, putativ... 72 1e-11 tr|B5DTS2|B5DTS2_DROPS GA27963 OS=Drosophila pseudoobscura pseud... 72 1e-11 tr|B4IMG1|B4IMG1_DROSE GM11154 OS=Drosophila sechellia GN=GM1115... 72 1e-11 tr|A5BJ11|A5BJ11_VITVI Putative uncharacterized protein OS=Vitis... 72 2e-11
>tr|Q9XZR7|Q9XZR7_DROBU Protease, reverse transcriptase, ribonuclease H, integrase (Fragment) OS=Drosophila buzzatii GN=pol PE=4 SV=1 Length = 1147
Score = 80.9 bits (198), Expect = 3e-14 Identities = 42/86 (48%), Positives = 56/86 (65%) Frame = +1
Query: 34 QHSFQEHKQVIQKSAMISHPDFNKPFLLQTDASNQGLEATLLQQDSSSRWHPISFISRAL 213 Q +F+ K + +S +++ PDF+KPF LQTDASN GL A +L Q S IS+ SR L Sbjct: 567 QRAFETVKAKLTESPVLACPDFSKPFCLQTDASNYGLGA-ILTQTSEEGERVISYASRTL 625
Query: 214 TAAEQNYATTEKELLAIVWAFTKFHP 291 +AE+NY+ TEKE LAI+W K P Sbjct: 626 NSAERNYSATEKECLAIIWGIRKLRP 651
>tr|O46115|O46115_DROME Protease (Reverse transcriptase) (Rnase h) (Integrase) (Fragment) OS=Drosophila melanogaster GN=pol PE=4 SV=1 Length = 1217
Score = 78.2 bits (191), Expect = 2e-13 Identities = 39/84 (46%), Positives = 53/84 (63%) Frame = +1
Query: 40 SFQEHKQVIQKSAMISHPDFNKPFLLQTDASNQGLEATLLQQDSSSRWHPISFISRALTA 219 +F++ K ++ ++ HPDF KPF+L TDASN L A +L Q S P+ F SR L+ Sbjct: 594 AFEQCKTLLSNDPILIHPDFEKPFILTTDASNFALGA-VLSQGSLQNDRPVCFASRTLSD 652
Query: 220 AEQNYATTEKELLAIVWAFTKFHP 291 E NY+T EKE+LAI+WA F P Sbjct: 653 TEVNYSTIEKEMLAIIWAVKYFRP 676
>tr|Q5BN17|Q5BN17_DROME Reverse transcriptase OS=Drosophila melanogaster GN=pol PE=4 SV=1 Length = 1088
Score = 77.8 bits (190), Expect = 3e-13 Identities = 40/89 (44%), Positives = 55/89 (61%) Frame = +1
Query: 25 DKCQHSFQEHKQVIQKSAMISHPDFNKPFLLQTDASNQGLEATLLQQDSSSRWHPISFIS 204 D+ + +F+ K ++ ++ +PDF KPF L TDASN + A L Q S P+ F S Sbjct: 476 DEFKKAFEYCKTLLSNDPILQYPDFTKPFTLTTDASNFAIGAVLSQGPVHSD-RPVCFAS 534
Query: 205 RALTAAEQNYATTEKELLAIVWAFTKFHP 291 R L+AAE NY+T EKE+LAI+WA F P Sbjct: 535 RTLSAAETNYSTIEKEMLAIIWAVQYFRP 563
>tr|Q7M3L4|Q7M3L4_DROBU Putative uncharacterized protein 2 (Clone Db314) OS=Drosophila buzzatii GN=pol PE=4 SV=1 Length = 754
Score = 77.0 bits (188), Expect = 4e-13 Identities = 41/86 (47%), Positives = 54/86 (62%) Frame = +1
Query: 34 QHSFQEHKQVIQKSAMISHPDFNKPFLLQTDASNQGLEATLLQQDSSSRWHPISFISRAL 213 Q +F+ K + + +++ PDF KPF LQTDASN GL A +L Q S IS+ SR L Sbjct: 266 QRAFETVKAKLTELPVLACPDFLKPFCLQTDASNYGLVA-ILAQTSEEGERVISYASRTL 324
Query: 214 TAAEQNYATTEKELLAIVWAFTKFHP 291 +AE+NY+ TEKE LAI+W K P Sbjct: 325 NSAERNYSATEKECLAIIWGIRKLRP 350
>tr|B4ISU8|B4ISU8_DROYA GE11339 OS=Drosophila yakuba GN=GE11339 PE=4 SV=1 Length = 481
Score = 76.6 bits (187), Expect = 6e-13 Identities = 39/90 (43%), Positives = 55/90 (61%), Gaps = 1/90 (1%) Frame = +1
Query: 7 LPAGTPDKCQHSFQEHKQVIQKSAMISHPDFNKPFLLQTDASNQGLE-ATLLQQDSSSRW 183 +P D +F + K + S +++ PDF+KPF L TDASN +L QD + Sbjct: 53 VPVELDDTALQAFDDLKTTLFSSEVLAFPDFSKPFHLTTDASNYSYALGAVLSQDIEGKD 112
Query: 184 HPISFISRALTAAEQNYATTEKELLAIVWA 273 PI++ISR L+ ++NYAT EKE+LAIVWA Sbjct: 113 RPIAYISRTLSITDENYATIEKEMLAIVWA 142
>tr|B4HCK7|B4HCK7_DROPE GL14157 OS=Drosophila persimilis GN=GL14157 PE=4 SV=1 Length = 192
Score = 76.6 bits (187), Expect = 6e-13 Identities = 39/86 (45%), Positives = 55/86 (63%) Frame = +1
Query: 34 QHSFQEHKQVIQKSAMISHPDFNKPFLLQTDASNQGLEATLLQQDSSSRWHPISFISRAL 213 Q +F+E K+ + +++ PDF+K F+LQTDAS+ GL+A L Q+ IS+ SR L Sbjct: 77 QEAFEEVKRRLVAKLVLACPDFSKKFILQTDASDYGLDAMLTQETERGE-RVISYASRTL 135
Query: 214 TAAEQNYATTEKELLAIVWAFTKFHP 291 E+NY+ TEKE LAIVWA + P Sbjct: 136 NGPERNYSATEKEYLAIVWAIRRLRP 161
>tr|B5DU21|B5DU21_DROPS GA23283 OS=Drosophila pseudoobscura pseudoobscura GN=GA23283 PE=4 SV=1 Length = 575
Score = 76.3 bits (186), Expect = 7e-13 Identities = 40/86 (46%), Positives = 55/86 (63%) Frame = +1
Query: 34 QHSFQEHKQVIQKSAMISHPDFNKPFLLQTDASNQGLEATLLQQDSSSRWHPISFISRAL 213 Q +F++ K + +++ PDF+K F+ QTDAS+ GLEA L Q+ IS+ SR L Sbjct: 271 QQAFEDVKSRLTADPVLACPDFSKKFVHQTDASDYGLEAILTQETGE---RVISYASRTL 327
Query: 214 TAAEQNYATTEKELLAIVWAFTKFHP 291 +AE+NY+ TEKE LAIVWA K P Sbjct: 328 NSAEKNYSATEKECLAIVWAIRKLKP 353
>tr|B5DSQ4|B5DSQ4_DROPS GA27703 OS=Drosophila pseudoobscura pseudoobscura GN=GA27703 PE=4 SV=1 Length = 1021
Score = 75.9 bits (185), Expect = 1e-12 Identities = 40/86 (46%), Positives = 54/86 (62%) Frame = +1
Query: 34 QHSFQEHKQVIQKSAMISHPDFNKPFLLQTDASNQGLEATLLQQDSSSRWHPISFISRAL 213 Q +F+E K + +++ PD +K F+LQTDAS+ GL A L Q+ IS+ SR L Sbjct: 623 QQAFEELKSRLTADPVLACPDISKKFVLQTDASDYGLGAILTQETEKGE-RVISYASRTL 681
Query: 214 TAAEQNYATTEKELLAIVWAFTKFHP 291 +AE+NY+ TEKE LAIVWA K P Sbjct: 682 NSAEKNYSATEKECLAIVWAIRKLKP 707
>tr|Q2R1M0|Q2R1M0_ORYSJ Os11g0600000 protein OS=Oryza sativa subsp. japonica GN=Os11g0600000 PE=4 SV=2 Length = 1347
Score = 75.5 bits (184), Expect = 1e-12 Identities = 37/83 (44%), Positives = 59/83 (71%) Frame = +1
Query: 40 SFQEHKQVIQKSAMISHPDFNKPFLLQTDASNQGLEATLLQQDSSSRWHPISFISRALTA 219 +FQE KQ +Q++ +++ PDFN+ F+++TDAS++G+ A L+Q HPI+F+S+AL Sbjct: 858 AFQEVKQCLQQAPVLAMPDFNQQFVIETDASDKGIGAVLMQAG-----HPIAFLSKALGP 912
Query: 220 AEQNYATTEKELLAIVWAFTKFH 288 Q ++T EKE LAI+ A K+H Sbjct: 913 KAQGFSTYEKECLAILMAVDKWH 935
>tr|Q2QUM2|Q2QUM2_ORYSJ Retrotransposon protein, putative, unclassified OS=Oryza sativa subsp. japonica GN=LOC_Os12g15780 PE=4 SV=2 Length = 1219
Score = 75.1 bits (183), Expect = 2e-12 Identities = 37/86 (43%), Positives = 58/86 (67%) Frame = +1
Query: 34 QHSFQEHKQVIQKSAMISHPDFNKPFLLQTDASNQGLEATLLQQDSSSRWHPISFISRAL 213 + +FQ KQ + + +++ PDFN+PF+++TDASN+G+ A +Q++ HPI+F+SRAL Sbjct: 778 EQAFQALKQALITAPVLAMPDFNEPFVVETDASNKGIRAVSMQKN-----HPIAFLSRAL 832
Query: 214 TAAEQNYATTEKELLAIVWAFTKFHP 291 Q +T EKE LAI+ A +HP Sbjct: 833 GTRHQGLSTYEKESLAIMLAVEHWHP 858
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