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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP919458
Clone id YMU001_000125_C11
Library
Length 452
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000125_C11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
ATGGTTCGTCTGCCTCTGCCTTGTAGCTCTCATGATACTTGCTGGGAAATCTAGGCCAAC
GAACATAGCGAATGTGAGTAGGGACAACTCTACTCACTCTTTCAGTGGCATCATCGACCA
TCTTTTTCACATCATTACTTAGGGATTTCATGAGAGCACCAATATATTTCGAGAACATGT
TTAATGACAATATATGCATACAATCAAAAACTAGGTCAAGATGTGGATTAAACCCATGTA
GGTCATAAAATCTCCACAGTGGAGACACTCCAGAAAGACCACATTCCTTGAGTATGGCTT
CACGCTGGCCCTCTGAGAAGGCCCTTTTGGAGGCTAAGATAGAAGTAGTGGACTCCTCTA
TCTGACGCTTTGCAGAAGGATATCTGAATTGATACCTGTTGTTGTCATAAACGTATCTTC
CACATCCTTCACTATCCAAACGAGCACTTGGC
■■Homology search results ■■ -
sp_hit_id P29721
Definition sp|P29721|TMPA_TREPH Treponemal membrane protein A OS=Treponema phagedenis
Align length 34
Score (bit) 29.6
E-value 6.3
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919458|Adiantum capillus-veneris mRNA, clone:
YMU001_000125_C11.
         (452 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P29721|TMPA_TREPH Treponemal membrane protein A OS=Treponema ...    30   6.3  
sp|Q492P3|SYN_BLOPB Asparaginyl-tRNA synthetase OS=Blochmannia p...    29   8.2  

>sp|P29721|TMPA_TREPH Treponemal membrane protein A OS=Treponema
           phagedenis GN=tmpA PE=4 SV=1
          Length = 344

 Score = 29.6 bits (65), Expect = 6.3
 Identities = 16/34 (47%), Positives = 20/34 (58%)
 Frame = -2

Query: 187 SLNMFSKYIGALMKSLSNDVKKMVDDATERVSRV 86
           SL  ++K I A  KSLS D KK  DDA   ++ V
Sbjct: 161 SLMYYNKVIDAGYKSLSQDAKKTADDAKAALTAV 194


>sp|Q492P3|SYN_BLOPB Asparaginyl-tRNA synthetase OS=Blochmannia
           pennsylvanicus (strain BPEN) GN=asnS PE=3 SV=1
          Length = 470

 Score = 29.3 bits (64), Expect = 8.2
 Identities = 35/128 (27%), Positives = 50/128 (39%), Gaps = 23/128 (17%)
 Frame = -2

Query: 379 PSAKRQIEESTTSILASKRAFS--EGQREAILKECGLSGV---SPLWRFYDLHGFNPHLD 215
           P+ K      TT    SK+AF    GQ  A    C LS V    P +R  +    N HL 
Sbjct: 191 PNEKLHHTHDTTYDFFSKKAFLTVSGQLNAEAYACALSKVYTFGPTFRA-EYSNTNRHLA 249

Query: 214 -----------LVFDCMHILSLNMFSKYIGALMKSLSNDVKKMVDDAT-------ERVSR 89
                      +  D + IL+ ++    I  L++  S+D+K +VD          E  S 
Sbjct: 250 EFWMIEPEAAFMTLDDIIILAESLLKNIIRILLEKRSDDIKYLVDKINKNIITILENFSE 309

Query: 88  VVPTHIRY 65
           +   HI Y
Sbjct: 310 IKFNHIEY 317
tr_hit_id A9RQQ0
Definition tr|A9RQQ0|A9RQQ0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 111
Score (bit) 65.1
E-value 2.0e-09
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919458|Adiantum capillus-veneris mRNA, clone:
YMU001_000125_C11.
         (452 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9RQQ0|A9RQQ0_PHYPA Predicted protein OS=Physcomitrella paten...    65   2e-09
tr|A7S850|A7S850_NEMVE Predicted protein OS=Nematostella vectens...    37   0.65 
tr|B0DXS0|B0DXS0_LACBS Predicted protein OS=Laccaria bicolor (st...    36   1.1  
tr|B0DNP2|B0DNP2_LACBS Predicted protein OS=Laccaria bicolor (st...    36   1.1  
tr|B0DM22|B0DM22_LACBS Predicted protein OS=Laccaria bicolor (st...    35   1.9  
tr|B8LK87|B8LK87_PICSI Putative uncharacterized protein OS=Picea...    33   5.5  
tr|B3RVS1|B3RVS1_TRIAD Predicted protein OS=Trichoplax adhaerens...    33   7.1  
tr|B0W7Z9|B0W7Z9_CULQU Putative uncharacterized protein OS=Culex...    33   7.1  
tr|B2WLF0|B2WLF0_PYRTR Putative uncharacterized protein OS=Pyren...    33   7.1  
tr|Q03JL9|Q03JL9_STRTD Glycosyltransferase involved in cell wall...    33   9.3  
tr|B0DRV5|B0DRV5_LACBS Predicted protein OS=Laccaria bicolor (st...    33   9.3  
tr|B0D4L3|B0D4L3_LACBS Predicted protein OS=Laccaria bicolor (st...    33   9.3  
tr|A6R858|A6R858_AJECN Predicted protein OS=Ajellomyces capsulat...    33   9.3  

>tr|A9RQQ0|A9RQQ0_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_69357 PE=4 SV=1
          Length = 496

 Score = 65.1 bits (157), Expect = 2e-09
 Identities = 37/111 (33%), Positives = 55/111 (49%), Gaps = 2/111 (1%)
 Frame = -2

Query: 445 ARLDSEGCGRYVYDNNRYQFRYPSAKRQIEESTTSILASKRA--FSEGQREAILKECGLS 272
           A L +     YV   N  QF     K+  +E   S+    R    S G  +   +  G+ 
Sbjct: 373 AALSNARAPSYVCGKNHEQFHIMPQKQTSKEFFASVCNLNRIPHSSRGACKRFSQATGII 432

Query: 271 GVSPLWRFYDLHGFNPHLDLVFDCMHILSLNMFSKYIGALMKSLSNDVKKM 119
           G SPLW+FY ++GF+   D+V   MH+  LN+F  YI  L + +SND+ K+
Sbjct: 433 GESPLWKFYHMYGFDMSQDIVSYAMHVAGLNLFKTYIAKLFEWISNDIFKL 483


>tr|A7S850|A7S850_NEMVE Predicted protein OS=Nematostella vectensis
           GN=v1g208262 PE=4 SV=1
          Length = 868

 Score = 36.6 bits (83), Expect = 0.65
 Identities = 27/94 (28%), Positives = 48/94 (51%), Gaps = 4/94 (4%)
 Frame = -2

Query: 415 YVYDNNRYQFRYPSAKRQI--EESTTSILASKRAFSEGQREAILKECGLSGVSPLWR--F 248
           Y Y +NR+  R+P  KR +  EES    L ++   S   R+ +  + G +G +P++    
Sbjct: 351 YYYGDNRFHARHPWEKRDVTAEESIFYDLDNENRVS--VRKKLSSQEGFTG-TPIFHQYL 407

Query: 247 YDLHGFNPHLDLVFDCMHILSLNMFSKYIGALMK 146
           Y L+ F+    +V+D  H L LN+    +  L++
Sbjct: 408 YPLYKFDCLYHMVYDIFHTLPLNICKNQLSRLLQ 441


>tr|B0DXS0|B0DXS0_LACBS Predicted protein OS=Laccaria bicolor
           (strain S238N-H82) GN=LACBIDRAFT_313195 PE=4 SV=1
          Length = 819

 Score = 35.8 bits (81), Expect = 1.1
 Identities = 25/75 (33%), Positives = 37/75 (49%)
 Frame = -2

Query: 385 RYPSAKRQIEESTTSILASKRAFSEGQREAILKECGLSGVSPLWRFYDLHGFNPHLDLVF 206
           +YP   R  EES  ++  +     +   E ILK+ GL GV     F+D+   +PH  L F
Sbjct: 468 KYPL--RTAEESKATVDQANECRRKDDAEEILKKKGLRGVQN--SFWDIENSDPHHALSF 523

Query: 205 DCMHILSLNMFSKYI 161
           D MH  S  +  ++I
Sbjct: 524 DRMHNNSHGLGGRHI 538


>tr|B0DNP2|B0DNP2_LACBS Predicted protein OS=Laccaria bicolor
           (strain S238N-H82) GN=LACBIDRAFT_306780 PE=4 SV=1
          Length = 963

 Score = 35.8 bits (81), Expect = 1.1
 Identities = 25/75 (33%), Positives = 37/75 (49%)
 Frame = -2

Query: 385 RYPSAKRQIEESTTSILASKRAFSEGQREAILKECGLSGVSPLWRFYDLHGFNPHLDLVF 206
           +YP   R  EES  ++  +     +   E ILK+ GL GV     F+D+   +PH  L F
Sbjct: 447 KYPL--RTAEESKATVDQANECRRKDDAEEILKKKGLRGVQN--SFWDIENSDPHHALSF 502

Query: 205 DCMHILSLNMFSKYI 161
           D MH  S  +  ++I
Sbjct: 503 DRMHNNSHGLGGRHI 517


>tr|B0DM22|B0DM22_LACBS Predicted protein OS=Laccaria bicolor
           (strain S238N-H82) GN=LACBIDRAFT_304638 PE=4 SV=1
          Length = 849

 Score = 35.0 bits (79), Expect = 1.9
 Identities = 26/87 (29%), Positives = 45/87 (51%)
 Frame = -2

Query: 382 YPSAKRQIEESTTSILASKRAFSEGQREAILKECGLSGVSPLWRFYDLHGFNPHLDLVFD 203
           YP  +R+ E+      A+++  S G ++ +LKE GL  V  +  F+  HG + H  L FD
Sbjct: 357 YP--ERRAEKMEEIYRAAQKLLS-GPKDELLKEFGLRDVENV--FWTFHGSDIHRALSFD 411

Query: 202 CMHILSLNMFSKYIGALMKSLSNDVKK 122
            +H     +FS ++   +K   N++ K
Sbjct: 412 RLHAYHGGLFSDHLLPEVKGHINELGK 438


>tr|B8LK87|B8LK87_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 384

 Score = 33.5 bits (75), Expect = 5.5
 Identities = 23/84 (27%), Positives = 34/84 (40%), Gaps = 9/84 (10%)
 Frame = -2

Query: 451 PSARLDSEGCGRYVYDNNRYQFRYPSAKRQIEESTTSIL---------ASKRAFSEGQRE 299
           PSA    +G        N + + Y + K+   +   SIL         A K  ++EG R 
Sbjct: 157 PSADAFDKGIYILEIGGNDFSYGYKNLKQSPGQVKQSILPKVAKSVAAAVKELYNEGART 216

Query: 298 AILKECGLSGVSPLWRFYDLHGFN 227
            ++K+ G  G  P W  Y  H  N
Sbjct: 217 ILVKDVGPQGCQPFWLTYFGHSSN 240


>tr|B3RVS1|B3RVS1_TRIAD Predicted protein OS=Trichoplax adhaerens
            GN=TRIADDRAFT_55754 PE=4 SV=1
          Length = 2206

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 16/35 (45%), Positives = 22/35 (62%)
 Frame = -2

Query: 373  AKRQIEESTTSILASKRAFSEGQREAILKECGLSG 269
            ++R I   T+SIL S R FS+  R  +L E G+SG
Sbjct: 1557 SQRGIMTPTSSILPSSRIFSQSSRSLLLSESGISG 1591


>tr|B0W7Z9|B0W7Z9_CULQU Putative uncharacterized protein OS=Culex
           quinquefasciatus GN=CpipJ_CPIJ003388 PE=4 SV=1
          Length = 621

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 14/46 (30%), Positives = 25/46 (54%)
 Frame = -2

Query: 412 VYDNNRYQFRYPSAKRQIEESTTSILASKRAFSEGQREAILKECGL 275
           V   +RY  +   A+++  E+ T +   +R   E +R+A LKEC +
Sbjct: 565 VNQESRYSAKLEDAEKRASEAETKVFELRRRLDEVERDASLKECNI 610


>tr|B2WLF0|B2WLF0_PYRTR Putative uncharacterized protein
           OS=Pyrenophora tritici-repentis (strain Pt-1C-BFP)
           GN=PTRG_10810 PE=4 SV=1
          Length = 369

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 28/84 (33%), Positives = 35/84 (41%), Gaps = 5/84 (5%)
 Frame = -2

Query: 451 PSARLDSEGCGRYVYDNNRYQ-FRYPSAKRQIE-ESTTSILASKRAFSEGQREAILKECG 278
           PS   D  GC       NRY  F     KR  +   T S L++ R ++     A+  ECG
Sbjct: 82  PSKLRDCPGC------RNRYDDFVAMHMKRTGDIHFTGSFLSAHRLYTTAFEHALQTECG 135

Query: 277 LSGVSPLW---RFYDLHGFNPHLD 215
            +G  P W   RF D    NP  D
Sbjct: 136 YNGTQPYWNWGRFADNIDANPLFD 159


>tr|Q03JL9|Q03JL9_STRTD Glycosyltransferase involved in cell wall
           biogenesis OS=Streptococcus thermophilus (strain ATCC
           BAA-491 / LMD-9) GN=STER_1441 PE=4 SV=1
          Length = 322

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 26/91 (28%), Positives = 38/91 (41%), Gaps = 1/91 (1%)
 Frame = -2

Query: 415 YVYDNNRYQFRYPSAKRQIEESTTSILASK-RAFSEGQREAILKECGLSGVSPLWRFYDL 239
           ++ DNN   F YP  +  I   T   L  K +            E  +S  S        
Sbjct: 157 FLTDNNIQFFDYPIGEDVIFTLTAYNLTEKIKIIDYNGYNWFFNEKSISNTSQ------- 209

Query: 238 HGFNPHLDLVFDCMHILSLNMFSKYIGALMK 146
            GFNP++D+V+   H+L +   SKYI   +K
Sbjct: 210 RGFNPNIDIVYFLSHLLQVAGDSKYIRYFIK 240