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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP919478
Clone id YMU001_000125_E09
Library
Length 550
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000125_E09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
AGTGATGTGACGAGGTTCCGTTACGGTGATGAACAACATTTGGATGAAGCTTTGAAAAGG
ATCTTTCGATATGGTCAAGGAGGAGGTATTCAACGTCGTAATGCTCCTGTGCTGCAGGCT
ATTCGCGAAGAGGTTACCACTGAAGGAAAGTATTCGCTCGTGCTAGTATTCGAAGCCAAG
GCACTGGAACTAAAAGACTTCACGGAACGGCAGGCCAAGTTTGCATCCTTTTTTGGACCC
GGGATAACGGCAGATATAGCTGCGGGAGGCGAGAACTTGTATGAAGTAAAGCTTGTGGTC
AATGGAGGGCAATAGTATGCTGGAGCGGCAGGTTACTTCCTCGGTCGCAACCTTGTAACA
TATGGGATTGCTGTACAGTCCTGTTTAGTTGTATCTAATGAAAGCTTCTTATCTGTATTA
CTACTAGTAAGGCTGTCTGTTCAAGCTTAGCGACGACCAACATGACATATCATTGTGTTT
TGGAGTATTCAACTTTTGAGCTCTCTTGCAAGAGAATAAGATTGTCAAAACTTGTGCTAA
GGTTTGCAAT
■■Homology search results ■■ -
sp_hit_id Q55403
Definition sp|Q55403|Y575_SYNY3 Thylakoid membrane protein slr0575 OS=Synechocystis sp. (strain PCC 6803)
Align length 98
Score (bit) 68.6
E-value 2.0e-11
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919478|Adiantum capillus-veneris mRNA, clone:
YMU001_000125_E09.
         (550 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q55403|Y575_SYNY3 Thylakoid membrane protein slr0575 OS=Synec...    69   2e-11
sp|Q9AVB0|LECB_PHYAM Lectin-B OS=Phytolacca americana PE=1 SV=1        31   4.5  
sp|Q65ST2|UVRB_MANSM UvrABC system protein B OS=Mannheimia succi...    30   6.0  
sp|Q7MAP8|PDXJ_WOLSU Pyridoxine 5'-phosphate synthase OS=Wolinel...    30   6.0  
sp|Q0V8T9|CTP5A_MOUSE Contactin associated protein like 5-1 OS=M...    30   6.0  

>sp|Q55403|Y575_SYNY3 Thylakoid membrane protein slr0575
           OS=Synechocystis sp. (strain PCC 6803) GN=slr0575 PE=4
           SV=1
          Length = 184

 Score = 68.6 bits (166), Expect = 2e-11
 Identities = 39/98 (39%), Positives = 55/98 (56%)
 Frame = +1

Query: 4   DVTRFRYGDEQHLDEALKRIFRYGQGGGIQRRNAPVLQAIREEVTTEGKYSLVLVFEAKA 183
           DVTR+RYG E HLDE+L+R+     G        PVL ++ E+   EGKY L L F +  
Sbjct: 87  DVTRYRYGQEAHLDESLERL-----GLSPTDEERPVLTSLLEQ-DWEGKYVLTLTFTSPF 140

Query: 184 LELKDFTERQAKFASFFGPGITADIAAGGENLYEVKLV 297
           + L+ + E+Q K A FFGP +   +A   E +  V L+
Sbjct: 141 ISLETWQEKQEKIAKFFGPDLEVTVAEPEEKVVTVNLI 178


>sp|Q9AVB0|LECB_PHYAM Lectin-B OS=Phytolacca americana PE=1 SV=1
          Length = 361

 Score = 30.8 bits (68), Expect = 4.5
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +3

Query: 294 CGQWRAIVCWSGRLLPRSQPCNIWDCC 374
           C  WR  V +SGR+ P+ + C+ W  C
Sbjct: 292 CDYWRCGVDFSGRVCPQGRCCSAWGWC 318


>sp|Q65ST2|UVRB_MANSM UvrABC system protein B OS=Mannheimia
           succiniciproducens (strain MBEL55E) GN=uvrB PE=3 SV=1
          Length = 678

 Score = 30.4 bits (67), Expect = 6.0
 Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 5/76 (6%)
 Frame = +1

Query: 13  RFRYGDE-----QHLDEALKRIFRYGQGGGIQRRNAPVLQAIREEVTTEGKYSLVLVFEA 177
           + +Y +E     Q L++ +  +   GQGG  + RN P  Q   E  TT   Y++ +  + 
Sbjct: 580 QMKYNEEHGITPQGLNKKVGELLDIGQGGSNKSRNKPRSQKAAEPATT---YAIPMTAKE 636

Query: 178 KALELKDFTERQAKFA 225
              ++K   ++  KFA
Sbjct: 637 YQQQIKKLEQQMYKFA 652


>sp|Q7MAP8|PDXJ_WOLSU Pyridoxine 5'-phosphate synthase OS=Wolinella
           succinogenes GN=pdxJ PE=3 SV=1
          Length = 262

 Score = 30.4 bits (67), Expect = 6.0
 Identities = 17/43 (39%), Positives = 21/43 (48%)
 Frame = +1

Query: 124 REEVTTEGKYSLVLVFEAKALELKDFTERQAKFASFFGPGITA 252
           REEVTTEG   L+  FE     +  F E     + F  P IT+
Sbjct: 95  REEVTTEGGLDLLGRFEILKSRIAQFRENDIAVSLFVDPDITS 137


>sp|Q0V8T9|CTP5A_MOUSE Contactin associated protein like 5-1 OS=Mus
           musculus GN=Cntnap5a PE=2 SV=1
          Length = 1304

 Score = 30.4 bits (67), Expect = 6.0
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = -2

Query: 522 ILFSCKRAQKLNTPKHNDMSCWSSLSLNRQPY 427
           +++ C+R++ LNTP     + W   S  R PY
Sbjct: 678 VIYHCRRSRLLNTPDGAPFTWWIGRSTERHPY 709
tr_hit_id A9NSY7
Definition tr|A9NSY7|A9NSY7_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 98
Score (bit) 171.0
E-value 3.0e-41
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919478|Adiantum capillus-veneris mRNA, clone:
YMU001_000125_E09.
         (550 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9NSY7|A9NSY7_PICSI Putative uncharacterized protein OS=Picea...   171   3e-41
tr|Q6YZK5|Q6YZK5_ORYSJ Os08g0359000 protein OS=Oryza sativa subs...   161   2e-38
tr|B4F874|B4F874_MAIZE Putative uncharacterized protein OS=Zea m...   158   2e-37
tr|B6TPW9|B6TPW9_MAIZE APE1 OS=Zea mays PE=2 SV=1                     157   4e-37
tr|A7PAM3|A7PAM3_VITVI Chromosome chr14 scaffold_9, whole genome...   155   1e-36
tr|B8BA11|B8BA11_ORYSI Putative uncharacterized protein OS=Oryza...   151   3e-35
tr|A3BSD0|A3BSD0_ORYSJ Putative uncharacterized protein OS=Oryza...   151   3e-35
tr|Q8H0W8|Q8H0W8_ARATH Putative uncharacterized protein At5g3866...   150   4e-35
tr|Q2HIR7|Q2HIR7_ARATH At5g38660 OS=Arabidopsis thaliana PE=2 SV=1    150   4e-35
tr|Q8GXZ8|Q8GXZ8_ARATH Putative uncharacterized protein At5g3866...   148   2e-34
tr|A9NQG3|A9NQG3_PICSI Putative uncharacterized protein OS=Picea...   129   1e-28
tr|Q9FFV6|Q9FFV6_ARATH Genomic DNA, chromosome 5, P1 clone:MBB18...   111   3e-23
tr|A9TNK0|A9TNK0_PHYPA Predicted protein (Fragment) OS=Physcomit...   109   8e-23
tr|A7QLX1|A7QLX1_VITVI Chromosome chr18 scaffold_122, whole geno...   103   6e-21
tr|Q00WY3|Q00WY3_OSTTA Homology to unknown gene OS=Ostreococcus ...    95   3e-18
tr|A4S6L6|A4S6L6_OSTLU Predicted protein (Fragment) OS=Ostreococ...    90   9e-17
tr|A9PH66|A9PH66_POPTR Putative uncharacterized protein OS=Popul...    88   3e-16
tr|A8JF87|A8JF87_CHLRE Predicted protein OS=Chlamydomonas reinha...    85   3e-15
tr|A3IVT2|A3IVT2_9CHRO Putative uncharacterized protein OS=Cyano...    76   1e-12
tr|B1X1Q3|B1X1Q3_CYAA5 Putative uncharacterized protein OS=Cyano...    75   2e-12
tr|B1XK23|B1XK23_SYNP2 Putative uncharacterized protein OS=Synec...    73   9e-12
tr|A7PY05|A7PY05_VITVI Chromosome chr15 scaffold_37, whole genom...    73   1e-11
tr|B4WIU5|B4WIU5_9SYNE Putative uncharacterized protein OS=Synec...    72   2e-11
tr|B7JZE9|B7JZE9_SYNP8 Putative uncharacterized protein OS=Synec...    72   3e-11
tr|B4C670|B4C670_9CHRO Putative uncharacterized protein OS=Cyano...    72   3e-11
tr|Q4BWL4|Q4BWL4_CROWT Putative uncharacterized protein OS=Croco...    70   7e-11
tr|Q5MZ47|Q5MZ47_SYNP6 Putative uncharacterized protein OS=Synec...    69   1e-10
tr|Q31N42|Q31N42_SYNE7 Putative uncharacterized protein OS=Synec...    69   1e-10
tr|B4AWW2|B4AWW2_9CHRO Putative uncharacterized protein OS=Cyano...    69   1e-10
tr|B0CDF7|B0CDF7_ACAM1 Putative uncharacterized protein OS=Acary...    68   3e-10

>tr|A9NSY7|A9NSY7_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 275

 Score =  171 bits (432), Expect = 3e-41
 Identities = 81/98 (82%), Positives = 90/98 (91%)
 Frame = +1

Query: 4   DVTRFRYGDEQHLDEALKRIFRYGQGGGIQRRNAPVLQAIREEVTTEGKYSLVLVFEAKA 183
           DV RFRYGDEQHLDEALKRIFRYGQGGGIQRRNAPVL  IREEVT EGKYSLVLVFEAKA
Sbjct: 169 DVARFRYGDEQHLDEALKRIFRYGQGGGIQRRNAPVLSMIREEVTAEGKYSLVLVFEAKA 228

Query: 184 LELKDFTERQAKFASFFGPGITADIAAGGENLYEVKLV 297
           L+L DF +R+AKFASFFGPG+TA++  GG+NLYEV+L+
Sbjct: 229 LQLTDFEQRRAKFASFFGPGVTAEVVKGGDNLYEVRLI 266


>tr|Q6YZK5|Q6YZK5_ORYSJ Os08g0359000 protein OS=Oryza sativa subsp.
           japonica GN=P0488B06.35 PE=2 SV=1
          Length = 271

 Score =  161 bits (407), Expect = 2e-38
 Identities = 77/99 (77%), Positives = 89/99 (89%)
 Frame = +1

Query: 1   SDVTRFRYGDEQHLDEALKRIFRYGQGGGIQRRNAPVLQAIREEVTTEGKYSLVLVFEAK 180
           SDVTR+RYGDEQHLDEALKRIF+YG GGGI RR+AP+LQ IREEVT +GKYSLVLVFEAK
Sbjct: 169 SDVTRYRYGDEQHLDEALKRIFQYGLGGGIPRRSAPILQNIREEVTDDGKYSLVLVFEAK 228

Query: 181 ALELKDFTERQAKFASFFGPGITADIAAGGENLYEVKLV 297
           ALE+ DF +RQAKF SFFGPGI A+I  GG++LYEV+L+
Sbjct: 229 ALEISDFEKRQAKFTSFFGPGIKAEIGKGGDDLYEVRLI 267


>tr|B4F874|B4F874_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 261

 Score =  158 bits (400), Expect = 2e-37
 Identities = 80/101 (79%), Positives = 89/101 (88%), Gaps = 2/101 (1%)
 Frame = +1

Query: 1   SDVTRFRYGDEQHLDEALKRIFRYGQGGGIQRRNAPVLQAIREEVTTEGKYSLVLVFEAK 180
           SDVTRFRYGDEQHLDEAL+RIF+YG GGGI RRNAP+LQ IREEVT +GKYSLVLVFEAK
Sbjct: 157 SDVTRFRYGDEQHLDEALQRIFQYGLGGGIPRRNAPILQKIREEVTDDGKYSLVLVFEAK 216

Query: 181 ALELKDFTERQAKFASFFGPGITADIAA--GGENLYEVKLV 297
           ALEL DF +RQAKF SFFGPGI A+I A  GG +LYEV+L+
Sbjct: 217 ALELSDFEKRQAKFTSFFGPGIKAEIDAGKGGGDLYEVRLI 257


>tr|B6TPW9|B6TPW9_MAIZE APE1 OS=Zea mays PE=2 SV=1
          Length = 261

 Score =  157 bits (397), Expect = 4e-37
 Identities = 79/101 (78%), Positives = 89/101 (88%), Gaps = 2/101 (1%)
 Frame = +1

Query: 1   SDVTRFRYGDEQHLDEALKRIFRYGQGGGIQRRNAPVLQAIREEVTTEGKYSLVLVFEAK 180
           SDVTRFRYGDEQHLDEAL+RIF+YG GGGI RRNAP+LQ IREEVT +GKYSLVLVF+AK
Sbjct: 157 SDVTRFRYGDEQHLDEALQRIFQYGLGGGIPRRNAPILQKIREEVTDDGKYSLVLVFQAK 216

Query: 181 ALELKDFTERQAKFASFFGPGITADIAA--GGENLYEVKLV 297
           ALEL DF +RQAKF SFFGPGI A+I A  GG +LYEV+L+
Sbjct: 217 ALELSDFEKRQAKFTSFFGPGIKAEIDAGKGGGDLYEVRLI 257


>tr|A7PAM3|A7PAM3_VITVI Chromosome chr14 scaffold_9, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00038180001
           PE=4 SV=1
          Length = 279

 Score =  155 bits (393), Expect = 1e-36
 Identities = 75/101 (74%), Positives = 88/101 (87%)
 Frame = +1

Query: 1   SDVTRFRYGDEQHLDEALKRIFRYGQGGGIQRRNAPVLQAIREEVTTEGKYSLVLVFEAK 180
           +DV R+RYGDEQHL+EALKRIF+YG GGGI RR+AP LQ IREEVT +GKY LVLVFEAK
Sbjct: 176 NDVIRYRYGDEQHLEEALKRIFQYGLGGGIPRRSAPTLQMIREEVTEDGKYCLVLVFEAK 235

Query: 181 ALELKDFTERQAKFASFFGPGITADIAAGGENLYEVKLVVN 303
           AL+L DF +RQAKFASFFGPGITA++A G  +LYEV+L+ N
Sbjct: 236 ALQLSDFEKRQAKFASFFGPGITAEVAKGENDLYEVRLISN 276


>tr|B8BA11|B8BA11_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_28948 PE=4 SV=1
          Length = 286

 Score =  151 bits (381), Expect = 3e-35
 Identities = 77/114 (67%), Positives = 89/114 (78%), Gaps = 15/114 (13%)
 Frame = +1

Query: 1   SDVTRFRYGDEQHLDEALKRIFRYGQGGGIQRRNAPVLQAIREE---------------V 135
           SDVTR+RYGDEQHLDEALKRIF+YG GGGI RR+AP+LQ IREE               V
Sbjct: 169 SDVTRYRYGDEQHLDEALKRIFQYGLGGGIPRRSAPILQNIREEYTVSTDLRAKAQPMLV 228

Query: 136 TTEGKYSLVLVFEAKALELKDFTERQAKFASFFGPGITADIAAGGENLYEVKLV 297
           T +GKYSLVLVFEAKALE+ DF +RQAKF SFFGPGI A+I  GG++LYEV+L+
Sbjct: 229 TDDGKYSLVLVFEAKALEISDFEKRQAKFTSFFGPGIKAEIGKGGDDLYEVRLI 282


>tr|A3BSD0|A3BSD0_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_025952 PE=4 SV=1
          Length = 294

 Score =  151 bits (381), Expect = 3e-35
 Identities = 77/114 (67%), Positives = 89/114 (78%), Gaps = 15/114 (13%)
 Frame = +1

Query: 1   SDVTRFRYGDEQHLDEALKRIFRYGQGGGIQRRNAPVLQAIREE---------------V 135
           SDVTR+RYGDEQHLDEALKRIF+YG GGGI RR+AP+LQ IREE               V
Sbjct: 177 SDVTRYRYGDEQHLDEALKRIFQYGLGGGIPRRSAPILQNIREEYTVSTDLRAKAQPMLV 236

Query: 136 TTEGKYSLVLVFEAKALELKDFTERQAKFASFFGPGITADIAAGGENLYEVKLV 297
           T +GKYSLVLVFEAKALE+ DF +RQAKF SFFGPGI A+I  GG++LYEV+L+
Sbjct: 237 TDDGKYSLVLVFEAKALEISDFEKRQAKFTSFFGPGIKAEIGKGGDDLYEVRLI 290


>tr|Q8H0W8|Q8H0W8_ARATH Putative uncharacterized protein At5g38660
           OS=Arabidopsis thaliana GN=At5g38660 PE=2 SV=1
          Length = 286

 Score =  150 bits (379), Expect = 4e-35
 Identities = 73/102 (71%), Positives = 87/102 (85%), Gaps = 1/102 (0%)
 Frame = +1

Query: 1   SDVTRFRYGDEQHLDEALKRIFRYGQGGGIQRRNAPVLQAIREEVTTEGKYSLVLVFEAK 180
           +DVTR+RYGDEQHL+EALKRIF+YG GGGI RR+AP+LQ IREEV T+G+Y +VLVFEAK
Sbjct: 175 NDVTRYRYGDEQHLEEALKRIFQYGLGGGIPRRSAPILQLIREEVLTDGRYCVVLVFEAK 234

Query: 181 ALELKDFTERQAKFASFFGPGITADIAAG-GENLYEVKLVVN 303
           AL L DF +RQAKF SFFGP ITA++  G  ENLYEV+L+ N
Sbjct: 235 ALTLSDFEKRQAKFTSFFGPNITAEVGKGESENLYEVRLISN 276


>tr|Q2HIR7|Q2HIR7_ARATH At5g38660 OS=Arabidopsis thaliana PE=2 SV=1
          Length = 286

 Score =  150 bits (379), Expect = 4e-35
 Identities = 73/102 (71%), Positives = 87/102 (85%), Gaps = 1/102 (0%)
 Frame = +1

Query: 1   SDVTRFRYGDEQHLDEALKRIFRYGQGGGIQRRNAPVLQAIREEVTTEGKYSLVLVFEAK 180
           +DVTR+RYGDEQHL+EALKRIF+YG GGGI RR+AP+LQ IREEV T+G+Y +VLVFEAK
Sbjct: 175 NDVTRYRYGDEQHLEEALKRIFQYGLGGGIPRRSAPILQLIREEVLTDGRYCVVLVFEAK 234

Query: 181 ALELKDFTERQAKFASFFGPGITADIAAG-GENLYEVKLVVN 303
           AL L DF +RQAKF SFFGP ITA++  G  ENLYEV+L+ N
Sbjct: 235 ALTLSDFEKRQAKFTSFFGPNITAEVGKGESENLYEVRLISN 276


>tr|Q8GXZ8|Q8GXZ8_ARATH Putative uncharacterized protein
           At5g38660/MBB18_21 OS=Arabidopsis thaliana
           GN=At5g38660/MBB18_21 PE=2 SV=1
          Length = 286

 Score =  148 bits (373), Expect = 2e-34
 Identities = 72/102 (70%), Positives = 86/102 (84%), Gaps = 1/102 (0%)
 Frame = +1

Query: 1   SDVTRFRYGDEQHLDEALKRIFRYGQGGGIQRRNAPVLQAIREEVTTEGKYSLVLVFEAK 180
           +DVTR+RYGD QHL+EALKRIF+YG GGGI RR+AP+LQ IREEV T+G+Y +VLVFEAK
Sbjct: 175 NDVTRYRYGDAQHLEEALKRIFQYGLGGGIPRRSAPILQLIREEVLTDGRYCVVLVFEAK 234

Query: 181 ALELKDFTERQAKFASFFGPGITADIAAG-GENLYEVKLVVN 303
           AL L DF +RQAKF SFFGP ITA++  G  ENLYEV+L+ N
Sbjct: 235 ALTLSDFEKRQAKFTSFFGPNITAEVGKGESENLYEVRLISN 276