BP919480 |
Clone id |
YMU001_000125_E11 |
Library |
YMU01 |
Length |
517 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000125_E11. |
Accession |
BP919480 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL2043Contig1 |
Sequence |
GTCGGGGACTCACAACCATGGCTAGCTCCTTGCGAGATCTCGAGCTTCTCATGGATTACA ACACAAAGCTTGTCTCTTCTGCGGCCTCCCCTGTAGCAGCAGCTCACATTTCTTCATCTC TACCAATTGCTTCAACAGAAACGGAAGCACAAGGACTGGAAGAGCAGGCTCTGGCGTTAC AGAATCATCGCCAGCACGCAGTATCTTTTCACCATCGCCCTTCCCTGCTTGCCTCCCTTT CCCTTGCCTTTGGTCCCGTCCTCTCCTTCAACCCTTGCCTCTCCAAATCGAGAGTTTTGG CTGCAAATTCAATAGCTTCTTCTGGAGCGAAGCTTCTCTCACAAAAGAAATGTATTAGCC CTACCCCTGTGATGCCAGCAATATCTGCGGCAACAACGTATCTGGATATGGAAGGGGCAG GTTCGAGTTCGGTTTCTGTGGGGAGCAAGAAGAAGTTCTTTTCTGCATTTCCTGATTATC TGCATCTTCCCGACAGAAACAATAGCTACGGAAACCC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P70211 |
Definition |
sp|P70211|DCC_MOUSE Netrin receptor DCC OS=Mus musculus |
Align length |
90 |
Score (bit) |
32.0 |
E-value |
1.8 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP919480|Adiantum capillus-veneris mRNA, clone: YMU001_000125_E11. (517 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|P70211|DCC_MOUSE Netrin receptor DCC OS=Mus musculus GN=Dcc P... 32 1.8 sp|P43146|DCC_HUMAN Netrin receptor DCC OS=Homo sapiens GN=DCC P... 31 3.0 sp|Q556Y7|LYSD_DICDI Lysozyme D OS=Dictyostelium discoideum GN=a... 31 4.0 sp|P47777|CD59_SAISC CD59 glycoprotein OS=Saimiri sciureus GN=CD... 31 4.0 sp|Q5RCR9|CSTP1_PONAB Uncharacterized metallophosphoesterase CST... 30 5.1 sp|Q9BRF8|CSTP1_HUMAN Uncharacterized metallophosphoesterase CST... 30 5.1 sp|P02836|HMEN_DROME Segmentation polarity homeobox protein engr... 30 5.2 sp|Q87EN2|DCTA_XYLFT C4-dicarboxylate transport protein OS=Xylel... 30 5.2 sp|Q9PEQ2|DCTA_XYLFA C4-dicarboxylate transport protein OS=Xylel... 30 5.2 sp|Q8N1L1|CV037_HUMAN Putative uncharacterized protein C22orf37 ... 30 5.2 sp|Q59MJ2|MCH1_CANAL Probable transporter MCH1 OS=Candida albica... 30 6.7 sp|Q8R1H8|BATF2_MOUSE Basic leucine zipper transcriptional facto... 30 6.7 sp|P40809|RG84C_DROME GTPase-activating protein RacGAP84C OS=Dro... 30 8.7 sp|Q9DA04|TMM89_MOUSE Transmembrane protein 89 OS=Mus musculus G... 30 8.8
>sp|P70211|DCC_MOUSE Netrin receptor DCC OS=Mus musculus GN=Dcc PE=1 SV=1 Length = 1447
Score = 32.0 bits (71), Expect = 1.8 Identities = 27/90 (30%), Positives = 40/90 (44%), Gaps = 7/90 (7%) Frame = +2
Query: 98 SSSHFFISTNCFNRNGSTRTGRAGSGVTESSPARSIFSPSP----FPACLPFPCLW---S 256 SSSH+ IS FN G G + ES+ RSI P+ +P FP S Sbjct: 788 SSSHYVISLKAFNNAGE------GVPLYESATTRSITDPTDPVDYYPLLDDFPTSGPDVS 841
Query: 257 RPLLQPLPLQIESFGCKFNSFFWSEASLTK 346 P+L P+ +Q + + W++ S+ K Sbjct: 842 TPMLPPVGVQAVALTHEAVRVSWADNSVPK 871
>sp|P43146|DCC_HUMAN Netrin receptor DCC OS=Homo sapiens GN=DCC PE=1 SV=1 Length = 1447
Score = 31.2 bits (69), Expect = 3.0 Identities = 27/90 (30%), Positives = 39/90 (43%), Gaps = 7/90 (7%) Frame = +2
Query: 98 SSSHFFISTNCFNRNGSTRTGRAGSGVTESSPARSIFSPSP----FPACLPFPCL---WS 256 SSSH+ IS FN G G + ES+ RSI P+ +P FP S Sbjct: 788 SSSHYVISLKAFNNAGE------GVPLYESATTRSITDPTDPVDYYPLLDDFPTSVPDLS 841
Query: 257 RPLLQPLPLQIESFGCKFNSFFWSEASLTK 346 P+L P+ +Q + W++ S+ K Sbjct: 842 TPMLPPVGVQAVALTHDAVRVSWADNSVPK 871
>sp|Q556Y7|LYSD_DICDI Lysozyme D OS=Dictyostelium discoideum GN=alyD-1 PE=3 SV=1 Length = 260
Score = 30.8 bits (68), Expect = 4.0 Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 10/47 (21%) Frame = +2
Query: 80 CGLPCSSSSHFFIS----------TNCFNRNGSTRTGRAGSGVTESS 190 CG PCS+ ++F T C GST TG GS T +S Sbjct: 52 CGTPCSAQTYFTADSQRFGCGVTLTICSTSGGSTTTGGTGSAGTSTS 98
>sp|P47777|CD59_SAISC CD59 glycoprotein OS=Saimiri sciureus GN=CD59 PE=2 SV=1 Length = 131
Score = 30.8 bits (68), Expect = 4.0 Identities = 19/53 (35%), Positives = 22/53 (41%) Frame = +2
Query: 20 G*LLARSRASHGLQHKACLFCGLPCSSSSHFFISTNCFNRNGSTRTGRAGSGV 178 G LL + H C C LP S STNC + S +AGSGV Sbjct: 11 GLLLVLAVFCHSGNSLQCYSCPLPTMESMECTASTNCTSNLDSCLIAKAGSGV 63
>sp|Q5RCR9|CSTP1_PONAB Uncharacterized metallophosphoesterase CSTP1 OS=Pongo abelii GN=CSTP1 PE=2 SV=1 Length = 314
Score = 30.4 bits (67), Expect = 5.1 Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%) Frame = +3
Query: 138 ETEAQGLEEQ-ALALQNHRQHAVSFHHRPSLLASL 239 + + Q L+EQ ++A Q H QHA+ F H P L S+ Sbjct: 179 QAQDQWLDEQLSIARQRHCQHAIIFQHIPLFLESI 213
>sp|Q9BRF8|CSTP1_HUMAN Uncharacterized metallophosphoesterase CSTP1 OS=Homo sapiens GN=CSTP1 PE=1 SV=2 Length = 314
Score = 30.4 bits (67), Expect = 5.1 Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%) Frame = +3
Query: 138 ETEAQGLEEQ-ALALQNHRQHAVSFHHRPSLLASL 239 + + Q L+EQ ++A Q H QHA+ F H P L S+ Sbjct: 179 QAQDQWLDEQLSIARQRHCQHAIVFQHIPLFLESI 213
>sp|P02836|HMEN_DROME Segmentation polarity homeobox protein engrailed OS=Drosophila melanogaster GN=en PE=1 SV=2 Length = 552
Score = 30.4 bits (67), Expect = 5.2 Identities = 18/44 (40%), Positives = 23/44 (52%) Frame = +2
Query: 95 SSSSHFFISTNCFNRNGSTRTGRAGSGVTESSPARSIFSPSPFP 226 SSSS + + N + S+R G +GSGV SSP P P P Sbjct: 350 SSSSGCSSAASSLNSSPSSRLGASGSGVNASSP-----QPQPIP 388
>sp|Q87EN2|DCTA_XYLFT C4-dicarboxylate transport protein OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=dctA PE=3 SV=1 Length = 449
Score = 30.4 bits (67), Expect = 5.2 Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 4/63 (6%) Frame = -1
Query: 454 FFLLPTETELEPAPSISRYVVAA----DIAGITGVGLIHFFCERSFAPEEAIEFAAKTLD 287 F T TEL PA ++ ++VA AG++G G I + PE I A L Sbjct: 329 FIAQATNTELTPAHQLALFLVAMLSSKGAAGVSGAGFITLAATLAVVPEVPIAGMALILG 388
Query: 286 LER 278 ++R Sbjct: 389 VDR 391
>sp|Q9PEQ2|DCTA_XYLFA C4-dicarboxylate transport protein OS=Xylella fastidiosa GN=dctA PE=3 SV=2 Length = 449
Score = 30.4 bits (67), Expect = 5.2 Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 4/63 (6%) Frame = -1
Query: 454 FFLLPTETELEPAPSISRYVVAA----DIAGITGVGLIHFFCERSFAPEEAIEFAAKTLD 287 F T TEL PA ++ ++VA AG++G G I + PE I A L Sbjct: 329 FIAQATNTELTPAHQLALFLVAMLSSKGAAGVSGAGFITLAATLTVVPEVPIAGMALILG 388
Query: 286 LER 278 ++R Sbjct: 389 VDR 391
>sp|Q8N1L1|CV037_HUMAN Putative uncharacterized protein C22orf37 OS=Homo sapiens GN=C22orf37 PE=2 SV=1 Length = 170
Score = 30.4 bits (67), Expect = 5.2 Identities = 36/124 (29%), Positives = 52/124 (41%), Gaps = 17/124 (13%) Frame = +2
Query: 26 LLARSRASHGLQHKACLFCGLPCSS--SSHFFIST--NCFNRNGSTRTGRAGSGVTESSP 193 L AR R G Q ++ LP + + F ++ + +G+ RT S ++ SP Sbjct: 29 LCARERGVRGTQPCPRIYLRLPAQNCEETRFCCASPGSVVLGHGAPRTASPPSALSHPSP 88
Query: 194 ARSI-FSPSPFPACLPFP------------CLWSRPLLQPLPLQIESFGCKFNSFFWSEA 334 + FSP P P+ L P CL S L ES GC +NS WS + Sbjct: 89 LEGLSFSPFP-PSVLSHPSPPEGLSFSLFHCLCSGKLS-------ESPGCFWNSLGWSFS 140
Query: 335 SLTK 346 LT+ Sbjct: 141 VLTE 144
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9S2A4 |
Definition |
tr|A9S2A4|A9S2A4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
133 |
Score (bit) |
47.4 |
E-value |
0.0004 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP919480|Adiantum capillus-veneris mRNA, clone: YMU001_000125_E11. (517 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9S2A4|A9S2A4_PHYPA Predicted protein OS=Physcomitrella paten... 47 4e-04 tr|Q17M37|Q17M37_AEDAE Putative uncharacterized protein OS=Aedes... 37 0.44 tr|B0WEK8|B0WEK8_CULQU Putative uncharacterized protein OS=Culex... 37 0.75 tr|B6KBE5|B6KBE5_TOXGO 2OG-Fe(II) oxygenase family oxidoreductas... 37 0.77 tr|B3MS41|B3MS41_DROAN GF20874 OS=Drosophila ananassae GN=GF2087... 35 2.2 tr|B4LL59|B4LL59_DROVI GJ22288 OS=Drosophila virilis GN=GJ22288 ... 34 4.9 tr|B4M079|B4M079_DROVI GJ23193 OS=Drosophila virilis GN=GJ23193 ... 33 6.5 tr|A9WDB2|A9WDB2_CHLAA Response regulator receiver OS=Chloroflex... 33 8.3 tr|B2QP76|B2QP76_9CHLR Adenylate/guanylate cyclase with GAF sens... 33 8.3 tr|Q4DMK6|Q4DMK6_TRYCR Putative uncharacterized protein OS=Trypa... 33 8.5
>tr|A9S2A4|A9S2A4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHR2a PE=4 SV=1 Length = 528
Score = 47.4 bits (111), Expect = 4e-04 Identities = 47/133 (35%), Positives = 61/133 (45%), Gaps = 6/133 (4%) Frame = +3
Query: 30 LRDLELLMDYNTKLVXXXXXXXXXXXXXXXLPIASTETEAQGLEEQALALQNHRQHAVSF 209 L DLEL++D N A+T E + EE+A+A + A SF Sbjct: 7 LDDLELILDRNLHRALAASRTNAPAPPWTNSGAAATGAEVEDDEEEAVASKEEVADAASF 66
Query: 210 HHRPSLLASLSLAFGPVLSFNPCLSKSRVLAANS------IASSGAKLLSQKKCISPTPV 371 + ASLSLA VL+ + LSK+ V+ S A SGA + SQKK SP PV Sbjct: 67 GNPLPSAASLSLALNSVLTSSLILSKNNVVPQASQRGGVGPAISGA-VPSQKKSHSPVPV 125
Query: 372 MPAISAATTYLDM 410 M A S LD+ Sbjct: 126 M-ASSKVQVALDI 137
>tr|Q17M37|Q17M37_AEDAE Putative uncharacterized protein OS=Aedes aegypti GN=AAEL001147 PE=4 SV=1 Length = 2386
Score = 37.4 bits (85), Expect = 0.44 Identities = 27/94 (28%), Positives = 48/94 (51%), Gaps = 11/94 (11%) Frame = +3
Query: 126 IASTETEAQGLEEQALALQNHRQHAVSFHHRPSLLASLSLAFGPVLSFNPCLSKSRVLAA 305 I +TE A+ + ++ + A++ H+ P L A L+ AFG + S NP L+ R++A Sbjct: 393 IKTTEQNAEKMSNMIRTWIDNYERAITNHYSPELRARLT-AFGKMQSQNPLLNSDRLIAP 451
Query: 306 NSIAS----------SGAKLLSQKKCISP-TPVM 374 S+ + +G K+L + I P TP++ Sbjct: 452 GSVINLAQKCTTVPHAGGKILISIEEIPPKTPII 485
>tr|B0WEK8|B0WEK8_CULQU Putative uncharacterized protein OS=Culex quinquefasciatus GN=CpipJ_CPIJ005719 PE=4 SV=1 Length = 3080
Score = 36.6 bits (83), Expect = 0.75 Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 11/94 (11%) Frame = +3
Query: 126 IASTETEAQGLEEQALALQNHRQHAVSFHHRPSLLASLSLAFGPVLSFNPCLSKSRVLAA 305 + +TE A+ + ++ + A++ H+ P L A L AFG + S NP L+ R++ A Sbjct: 1094 VKTTEQNAEKMSNMIRTWIDNYERAITNHYSPELRARLQ-AFGKMQSQNPLLNSDRLIPA 1152
Query: 306 NSIAS----------SGAKLLSQKKCISP-TPVM 374 S+ + +G K+L I P TP++ Sbjct: 1153 ASVTNLMQKCTTVPHAGGKILISTGDIEPKTPII 1186
>tr|B6KBE5|B6KBE5_TOXGO 2OG-Fe(II) oxygenase family oxidoreductase, putative OS=Toxoplasma gondii ME49 GN=TGME49_059150 PE=4 SV=1 Length = 1658
Score = 36.6 bits (83), Expect = 0.77 Identities = 33/115 (28%), Positives = 48/115 (41%), Gaps = 9/115 (7%) Frame = +2
Query: 68 ACLFCGLPCSSSSHFFISTNCFNRNGSTRTGRAGSGVTESSPARSIFSPSP---FPAC-- 232 +C CG SS++H +S + TR R+ T S R SPSP AC Sbjct: 391 SCSSCGSDSSSNTHRSLSRLSAS---PTRPARSPCVQTSFSKCRDTASPSPPRKASACAS 447
Query: 233 -LPF---PCLWSRPLLQPLPLQIESFGCKFNSFFWSEASLTKEMY*PYPCDASNI 385 LP PC WS P PL C+ ++ SE++L P ++++ Sbjct: 448 RLPCGLSPCRWSASCFPPEPLSCPDGSCRPVAYARSESTLCSAQRPSAPSSSTSV 502
>tr|B3MS41|B3MS41_DROAN GF20874 OS=Drosophila ananassae GN=GF20874 PE=4 SV=1 Length = 1186
Score = 35.0 bits (79), Expect = 2.2 Identities = 17/37 (45%), Positives = 22/37 (59%) Frame = +2
Query: 119 STNCFNRNGSTRTGRAGSGVTESSPARSIFSPSPFPA 229 S NCF+ NGS+ R+GSG S+ A + PS PA Sbjct: 560 SVNCFSGNGSSSGNRSGSGSGSSNSASPLSPPSGAPA 596
>tr|B4LL59|B4LL59_DROVI GJ22288 OS=Drosophila virilis GN=GJ22288 PE=4 SV=1 Length = 569
Score = 33.9 bits (76), Expect = 4.9 Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 1/73 (1%) Frame = +3
Query: 153 GLEEQALALQNHRQHAVSFHHRPSLLASLSLAFGPVLSFNPCLS-KSRVLAANSIASSGA 329 GL++Q LALQ +QH SF PSL+ + G + + LS S+ L +++ SG Sbjct: 186 GLKDQRLALQWVQQHIASFGGDPSLVTIFGHSAGGISTHLHMLSPSSKGLFQRAMSLSGT 245
Query: 330 KLLSQKKCISPTP 368 +++ P P Sbjct: 246 AMMAATMVYDPLP 258
>tr|B4M079|B4M079_DROVI GJ23193 OS=Drosophila virilis GN=GJ23193 PE=4 SV=1 Length = 1519
Score = 33.5 bits (75), Expect = 6.5 Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 7/66 (10%) Frame = +2
Query: 119 STNCFNRNGSTRTGRAGSGVTESSP-------ARSIFSPSPFPACLPFPCLWSRPLLQPL 277 ++N N++G++R + +G T+ + A S P+P PA +P P P PL Sbjct: 289 TSNSNNKSGNSRPAQETAGATQPAAQKPTGVVATSTSMPTPMPAPMPTPMPAPMPTPMPL 348
Query: 278 PLQIES 295 P+ + S Sbjct: 349 PMPMPS 354
>tr|A9WDB2|A9WDB2_CHLAA Response regulator receiver OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=Caur_1862 PE=4 SV=1 Length = 981
Score = 33.1 bits (74), Expect = 8.3 Identities = 24/79 (30%), Positives = 38/79 (48%) Frame = +3
Query: 177 LQNHRQHAVSFHHRPSLLASLSLAFGPVLSFNPCLSKSRVLAANSIASSGAKLLSQKKCI 356 ++N R + + R +L A L A P+L +P ++R+L ANS A S ++ + Sbjct: 631 VENARLYQIVNDERSTLNAILQSATDPILLIDP---QARLLLANSAALSRLQIDQKTHYG 687
Query: 357 SPTPVMPAISAATTYLDME 413 P PA+ A LD E Sbjct: 688 QPVDQFPALRAILPALDQE 706
>tr|B2QP76|B2QP76_9CHLR Adenylate/guanylate cyclase with GAF sensor(S) OS=Chloroflexus sp. Y-400-fl GN=Chy400DRAFT_2791 PE=4 SV=1 Length = 981
Score = 33.1 bits (74), Expect = 8.3 Identities = 24/79 (30%), Positives = 38/79 (48%) Frame = +3
Query: 177 LQNHRQHAVSFHHRPSLLASLSLAFGPVLSFNPCLSKSRVLAANSIASSGAKLLSQKKCI 356 ++N R + + R +L A L A P+L +P ++R+L ANS A S ++ + Sbjct: 631 VENARLYQIVNDERSTLNAILQSATDPILLIDP---QARLLLANSAALSRLQIDQKTHYG 687
Query: 357 SPTPVMPAISAATTYLDME 413 P PA+ A LD E Sbjct: 688 QPVDQFPALRAILPALDQE 706
>tr|Q4DMK6|Q4DMK6_TRYCR Putative uncharacterized protein OS=Trypanosoma cruzi GN=Tc00.1047053504021.140 PE=4 SV=1 Length = 788
Score = 33.1 bits (74), Expect = 8.5 Identities = 16/41 (39%), Positives = 25/41 (60%) Frame = +2
Query: 89 PCSSSSHFFISTNCFNRNGSTRTGRAGSGVTESSPARSIFS 211 P ++++ IS++ N NGST+ G AG G ++P R FS Sbjct: 503 PIAAAASATISSSNANNNGSTQAGSAGGGAQAAAPNRLRFS 543
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