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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP919482
Clone id YMU001_000125_F01
Library
Length 515
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000125_F01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
TTTTTTTTTTTTTTTTTTGACCTTGGCTCTACTCACTTCATTTTCATTGAGCTAGCTACC
AAGCTAGGAATTCATGACTTTGGATGTGGGCTTGCCATCTATTGTGAGATGGTGACAGGC
CAAAGTTCTGTATCCAAAAGCAAAGCATTGTTTATTCACAATTTTCACCGTTGATTCCAC
ACAACAAGGTTGTTGAGAATTGCTTTTTGTGTCACTTCTGAGGTTGCATTGCTTTGGAGA
TTGGATTTCAAAGATGCTCCAAATGAGGTGTGTCATTCTAGTCTTCCATCAAATTGTTTG
GTCACATTGCTTCAACAAGCTTGTTGTAGCATTAAGTACTACTACTAGCAAGATAGCAGA
TAGCAAGGTTGCAGCTCCTTTATTCTTAGTGAGAAAGGCCATTTAGATTCTCATGTGGAC
TCAAGACTGGTAGGTTTATCATCTTGTGTGAGTTGCAAGGAAGCCGTTTGCACCTGATAA
TTTTTGGCAATGTATCATCCACTGCAGCTACTACA
■■Homology search results ■■ -
sp_hit_id P46023
Definition sp|P46023|GR101_LYMST G-protein coupled receptor GRL101 OS=Lymnaea stagnalis
Align length 53
Score (bit) 32.3
E-value 1.2
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919482|Adiantum capillus-veneris mRNA, clone:
YMU001_000125_F01.
         (497 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P46023|GR101_LYMST G-protein coupled receptor GRL101 OS=Lymna...    32   1.2  
sp|Q8CHX6|MBTP2_MOUSE Membrane-bound transcription factor site-2...    30   4.7  
sp|O43462|MBTP2_HUMAN Membrane-bound transcription factor site-2...    30   8.0  
sp|Q0III2|MBTP2_BOVIN Membrane-bound transcription factor site-2...    30   8.0  

>sp|P46023|GR101_LYMST G-protein coupled receptor GRL101 OS=Lymnaea
           stagnalis PE=2 SV=1
          Length = 1115

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 6/53 (11%)
 Frame = -3

Query: 255 THLIW-SIFEIQSPKQCNLRSDTKSNSQQPCC-----VESTVKIVNKQCFAFG 115
           TH+ W + F +   KQC+   D   NS +  C     V +  K  N QC AFG
Sbjct: 122 THVKWHNHFCVPRDKQCDFLDDCGDNSDEKICERRECVATEFKCNNSQCVAFG 174


>sp|Q8CHX6|MBTP2_MOUSE Membrane-bound transcription factor site-2
           protease OS=Mus musculus GN=Mbtps2 PE=2 SV=1
          Length = 515

 Score = 30.4 bits (67), Expect = 4.7
 Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
 Frame = -2

Query: 118 WIQNFGLS--PSHNRWQAHIQSHEFLAW 41
           W++N GLS  P H RWQ  I +  F +W
Sbjct: 37  WLENNGLSISPFHIRWQTSIFNRAFYSW 64


>sp|O43462|MBTP2_HUMAN Membrane-bound transcription factor site-2
           protease OS=Homo sapiens GN=MBTPS2 PE=1 SV=1
          Length = 519

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
 Frame = -2

Query: 118 WIQNFGLS--PSHNRWQAHIQSHEFLAW 41
           W++N GLS  P H RWQ  + +  F +W
Sbjct: 37  WLENNGLSISPFHIRWQTAVFNRAFYSW 64


>sp|Q0III2|MBTP2_BOVIN Membrane-bound transcription factor site-2
           protease OS=Bos taurus GN=MBTPS2 PE=2 SV=1
          Length = 516

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
 Frame = -2

Query: 118 WIQNFGLS--PSHNRWQAHIQSHEFLAW 41
           W++N GLS  P H RWQ  + +  F +W
Sbjct: 37  WLENNGLSISPFHIRWQTAVFNRAFYSW 64
tr_hit_id Q234Z0
Definition tr|Q234Z0|Q234Z0_TETTH Putative uncharacterized protein OS=Tetrahymena thermophila SB210
Align length 80
Score (bit) 39.3
E-value 0.1
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919482|Adiantum capillus-veneris mRNA, clone:
YMU001_000125_F01.
         (497 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q234Z0|Q234Z0_TETTH Putative uncharacterized protein OS=Tetra...    39   0.10 
tr|Q234N3|Q234N3_TETTH Putative uncharacterized protein OS=Tetra...    38   0.23 
tr|A7Q5G6|A7Q5G6_VITVI Chromosome undetermined scaffold_53, whol...    29   1.4  
tr|A5BGE7|A5BGE7_VITVI Putative uncharacterized protein OS=Vitis...    29   1.4  
tr|A9RKY8|A9RKY8_PHYPA SNF2 family DNA-dependent ATPase OS=Physc...    28   1.8  
tr|Q5JL01|Q5JL01_ORYSJ Putative rad8 (Os01g0952200 protein) OS=O...    28   3.0  
tr|B8A980|B8A980_ORYSI Putative uncharacterized protein OS=Oryza...    28   3.0  
tr|A3A1K6|A3A1K6_ORYSJ Putative uncharacterized protein OS=Oryza...    28   3.0  
tr|Q4P899|Q4P899_USTMA Putative uncharacterized protein OS=Ustil...    33   5.7  
tr|A3BMY0|A3BMY0_ORYSJ Putative uncharacterized protein OS=Oryza...    33   9.8  
tr|A2YPF5|A2YPF5_ORYSI Putative uncharacterized protein OS=Oryza...    33   9.8  

>tr|Q234Z0|Q234Z0_TETTH Putative uncharacterized protein
           OS=Tetrahymena thermophila SB210 GN=TTHERM_00095590 PE=4
           SV=1
          Length = 839

 Score = 39.3 bits (90), Expect = 0.10
 Identities = 25/80 (31%), Positives = 36/80 (45%), Gaps = 4/80 (5%)
 Frame = +1

Query: 217 WRLDFKDAPNEVCHSSLPSNCLVTLLQQACCSIKYYY----*QDSR*QGCSSFILSEKGH 384
           ++L  +D  + VC SS+ SNC     Q++C    YYY     +DS  Q C      +K  
Sbjct: 133 YKLMIRDINDNVCTSSVSSNCDQPSAQKSCDCPNYYYQNSSIKDSCDQACDDGSFFKKNG 192

Query: 385 LDSHVDSRLVGLSSCVSCKE 444
            D      L   S C+ C+E
Sbjct: 193 CDCQKGYFLDNTSQCLKCQE 212


>tr|Q234N3|Q234N3_TETTH Putative uncharacterized protein
           OS=Tetrahymena thermophila SB210 GN=TTHERM_00102650 PE=4
           SV=1
          Length = 1073

 Score = 38.1 bits (87), Expect = 0.23
 Identities = 18/79 (22%), Positives = 41/79 (51%)
 Frame = +1

Query: 202 EVALLWRLDFKDAPNEVCHSSLPSNCLVTLLQQACCSIKYYY*QDSR*QGCSSFILSEKG 381
           +  L+ +  + D+  ++C    PS+CL+ +  Q C   +  Y  +S   GC + ++++  
Sbjct: 304 QACLINQGQYYDSSQKIC-GQCPSSCLICMSSQDCSVCQQNYQLNSLNNGCEACLINQGQ 362

Query: 382 HLDSHVDSRLVGLSSCVSC 438
           + DS+  + +  L +C+ C
Sbjct: 363 YYDSNTKTCINCLQNCLKC 381


>tr|A7Q5G6|A7Q5G6_VITVI Chromosome undetermined scaffold_53, whole
           genome shotgun sequence OS=Vitis vinifera
           GN=GSVIVT00030933001 PE=4 SV=1
          Length = 1294

 Score = 29.3 bits (64), Expect(2) = 1.4
 Identities = 15/29 (51%), Positives = 18/29 (62%)
 Frame = -2

Query: 310 YNKLVEAM*PNNLMED*NDTPHLEHL*NP 224
           YN+LV  +  N LM D ND  H+E L NP
Sbjct: 891 YNELVVTVRRNILMADWNDPSHVESLLNP 919



 Score = 25.4 bits (54), Expect(2) = 1.4
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -3

Query: 222  SPKQCNLRSDTKSNSQQPCCVESTVKIVN 136
            +PKQ   R  T  N +  CCV   +K+ +
Sbjct: 918  NPKQWKFRISTIKNVRLSCCVAGHIKVTD 946


>tr|A5BGE7|A5BGE7_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_032626 PE=4 SV=1
          Length = 1208

 Score = 29.3 bits (64), Expect(2) = 1.4
 Identities = 15/29 (51%), Positives = 18/29 (62%)
 Frame = -2

Query: 310 YNKLVEAM*PNNLMED*NDTPHLEHL*NP 224
           YN+LV  +  N LM D ND  H+E L NP
Sbjct: 797 YNELVVTVRRNILMADWNDPSHVESLLNP 825



 Score = 25.4 bits (54), Expect(2) = 1.4
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -3

Query: 222 SPKQCNLRSDTKSNSQQPCCVESTVKIVN 136
           +PKQ   R  T  N +  CCV   +K+ +
Sbjct: 824 NPKQWKFRISTIKNVRLSCCVAGHIKVTD 852


>tr|A9RKY8|A9RKY8_PHYPA SNF2 family DNA-dependent ATPase
           OS=Physcomitrella patens subsp. patens GN=CHR1501 PE=4
           SV=1
          Length = 1128

 Score = 28.5 bits (62), Expect(2) = 1.8
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -3

Query: 222 SPKQCNLRSDTKSNSQQPCCVESTVKI 142
           +PKQ   RS T  N++  CCV   +K+
Sbjct: 798 NPKQWKFRSSTLRNTRLSCCVAGHIKV 824



 Score = 25.8 bits (55), Expect(2) = 1.8
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = -2

Query: 310 YNKLVEAM*PNNLMED*NDTPHLEHL*NP 224
           YN+LV  +  N L+ D  D  H+E L NP
Sbjct: 771 YNELVVTVQRNILLADWRDPSHVESLLNP 799


>tr|Q5JL01|Q5JL01_ORYSJ Putative rad8 (Os01g0952200 protein)
           OS=Oryza sativa subsp. japonica GN=P0431G06.4 PE=4 SV=1
          Length = 1298

 Score = 27.7 bits (60), Expect(2) = 3.0
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = -2

Query: 310 YNKLVEAM*PNNLMED*NDTPHLEHL*NP 224
           YN+L   +  N LM D ND  H+E L NP
Sbjct: 896 YNELAVTIRRNILMADWNDPSHVESLLNP 924



 Score = 25.8 bits (55), Expect(2) = 3.0
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -3

Query: 222  SPKQCNLRSDTKSNSQQPCCVESTVKI 142
            +PKQ   R+ T  N +  CCV   +K+
Sbjct: 923  NPKQWKFRTTTIKNVRLSCCVAGHIKV 949


>tr|B8A980|B8A980_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_05224 PE=4 SV=1
          Length = 1298

 Score = 27.7 bits (60), Expect(2) = 3.0
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = -2

Query: 310 YNKLVEAM*PNNLMED*NDTPHLEHL*NP 224
           YN+L   +  N LM D ND  H+E L NP
Sbjct: 896 YNELAVTIRRNILMADWNDPSHVESLLNP 924



 Score = 25.8 bits (55), Expect(2) = 3.0
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -3

Query: 222  SPKQCNLRSDTKSNSQQPCCVESTVKI 142
            +PKQ   R+ T  N +  CCV   +K+
Sbjct: 923  NPKQWKFRTTTIKNVRLSCCVAGHIKV 949


>tr|A3A1K6|A3A1K6_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_004678 PE=4 SV=1
          Length = 1274

 Score = 27.7 bits (60), Expect(2) = 3.0
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = -2

Query: 310 YNKLVEAM*PNNLMED*NDTPHLEHL*NP 224
           YN+L   +  N LM D ND  H+E L NP
Sbjct: 872 YNELAVTIRRNILMADWNDPSHVESLLNP 900



 Score = 25.8 bits (55), Expect(2) = 3.0
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -3

Query: 222 SPKQCNLRSDTKSNSQQPCCVESTVKI 142
           +PKQ   R+ T  N +  CCV   +K+
Sbjct: 899 NPKQWKFRTTTIKNVRLSCCVAGHIKV 925


>tr|Q4P899|Q4P899_USTMA Putative uncharacterized protein OS=Ustilago
           maydis GN=UM03664.1 PE=4 SV=1
          Length = 642

 Score = 33.5 bits (75), Expect = 5.7
 Identities = 29/83 (34%), Positives = 38/83 (45%), Gaps = 8/83 (9%)
 Frame = +2

Query: 185 LFVSLLRLHCFGDWISKMLQMRCVILVFHQIVWSHCFNKLVVA---LSTTTSKIADSKVA 355
           +F SLLRL C  D  ++ML  +  +L   QIV   C   LV A   L T      DSKV+
Sbjct: 261 IFCSLLRLDCIADDETRMLAKQ--LLENRQIVSERCIELLVKAEMDLQTCKDYQDDSKVS 318

Query: 356 A-----PLFLVRKAI*ILMWTQD 409
                  L  V + + I  W +D
Sbjct: 319 GLTRDEALEFVERVVDIFAWHKD 341


>tr|A3BMY0|A3BMY0_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_024402 PE=4 SV=1
          Length = 1213

 Score = 32.7 bits (73), Expect = 9.8
 Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 1/98 (1%)
 Frame = -3

Query: 348 LLSAILLVVVLNATTSLLKQCDQTI*WKTRMTHLIWSIFEIQSPKQCNLRSDTK-SNSQQ 172
           LL A+ + +V N  +     C +      R T+LIW I    S      R DT  S +QQ
Sbjct: 602 LLPALGMSIVNNLASGDENNCVEI----HRETNLIWKIIGFTS-----FRGDTTTSEAQQ 652

Query: 171 PCCVESTVKIVNKQCFAFGYRTLACHHLTIDGKPTSKV 58
              V+S+VK++ +     G   +A  +L IDG    ++
Sbjct: 653 WVLVKSSVKVLQRLTSIGGEIGIALRNLAIDGDTRQEI 690