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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP919483
Clone id YMU001_000125_F02
Library
Length 582
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000125_F02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
TAACTTCTTGTGCTTCATCTATAATTAAATATTTCCACTCAACTTTGGAAAGCTTGCACC
TATCTCGCATGATAAATTCATGGGTGGTAACCAAAACGTTGAATTTCAGTGCACAAACCT
CCTGTGAATACAACTTCGTCCGTTGTTCTTTCCCTCCAACATAAAAAATACACGATACAG
ATGGTAACCATCGCAGAAGCTCGCTCTTCCAATTTACGATAACTGCATTGGGAACGATTA
TAAGATGAGGACCATAATTGCCCTTGAACTCCATCAAATAAGCAATCAAGGCCATAACCT
GAACAGTCTTGCCCAAGCCCATCTCATCTGCTAAGATTCCATTTAACCTATTATTATACA
AGGACAGCATCCATTGGAGACCAACAAGCTGGTAATCCCGCAAGATGCCAGCTCGAAGCA
TTGAAGGTTGCCGAACAATCCTCTCATTGACTGCATGTGCCAAACTATAGTACTTGCTAA
CAGACTCAGTGGCTCTATCTGGTGAATGAGGCCGTGCATCAACTTCATCACGGGCCCGTA
TTGTCGCTTCCTCTACTTCTTCTTCCGAAAGTCCCTGTGCTT
■■Homology search results ■■ -
sp_hit_id Q6EVK6
Definition sp|Q6EVK6|BRM_ARATH ATP-dependent helicase BRM OS=Arabidopsis thaliana
Align length 196
Score (bit) 302.0
E-value 9.0e-82
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919483|Adiantum capillus-veneris mRNA, clone:
YMU001_000125_F02.
         (582 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q6EVK6|BRM_ARATH ATP-dependent helicase BRM OS=Arabidopsis th...   302   9e-82
sp|P51531|SMCA2_HUMAN Probable global transcription activator SN...   177   4e-44
sp|P25439|BRM_DROME ATP-dependent helicase brm OS=Drosophila mel...   174   2e-43
sp|P51532|SMCA4_HUMAN Probable global transcription activator SN...   172   1e-42
sp|P32597|STH1_YEAST Nuclear protein STH1/NPS1 OS=Saccharomyces ...   169   9e-42
sp|P22082|SNF2_YEAST Transcription regulatory protein SNF2 OS=Sa...   167   5e-41
sp|Q9UTN6|SNF21_SCHPO Chromatin structure-remodeling complex sub...   165   2e-40
sp|O94421|SNF22_SCHPO SWI/SNF chromatin-remodeling complex subun...   164   2e-40
sp|Q6PGB8|SMCA1_MOUSE Probable global transcription activator SN...   147   3e-35
sp|P28370|SMCA1_HUMAN Probable global transcription activator SN...   147   3e-35
sp|Q8RWY3|ISW2_ARATH Putative chromatin-remodeling complex ATPas...   144   3e-34
sp|O60264|SMCA5_HUMAN SWI/SNF-related matrix-associated actin-de...   143   7e-34
sp|Q24368|ISWI_DROME Chromatin-remodeling complex ATPase chain I...   142   9e-34
sp|Q91ZW3|SMCA5_MOUSE SWI/SNF-related matrix-associated actin-de...   142   2e-33
sp|Q08773|ISW2_YEAST ISWI chromatin-remodeling complex ATPase IS...   142   2e-33
sp|Q6ZRS2|SRCAP_HUMAN Helicase SRCAP OS=Homo sapiens GN=SRCAP PE...   141   3e-33
sp|Q7G8Y3|ISW2_ORYSJ Probable chromatin-remodeling complex ATPas...   141   3e-33
sp|P41877|ISW1_CAEEL Chromatin-remodeling complex ATPase chain i...   140   3e-33
sp|O14139|HRP3_SCHPO Chromodomain helicase hrp3 OS=Schizosacchar...   139   8e-33
sp|Q9US25|HRP1_SCHPO Chromodomain helicase hrp1 OS=Schizosacchar...   137   3e-32
sp|Q5ARK3|SWR1_EMENI Helicase swr1 OS=Emericella nidulans GN=swr...   136   9e-32
sp|P32657|CHD1_YEAST Chromo domain-containing protein 1 OS=Sacch...   135   1e-31
sp|Q6CJ38|SWR1_KLULA Helicase SWR1 OS=Kluyveromyces lactis GN=SW...   135   2e-31
sp|Q759G7|SWR1_ASHGO Helicase SWR1 OS=Ashbya gossypii GN=SWR1 PE...   134   3e-31
sp|Q4WAS9|SWR1_ASPFU Helicase swr1 OS=Aspergillus fumigatus GN=s...   134   4e-31
sp|Q9NEL2|SSL1_CAEEL Helicase ssl-1 OS=Caenorhabditis elegans GN...   133   6e-31
sp|Q9NDJ2|DOM_DROME Helicase domino OS=Drosophila melanogaster G...   133   6e-31
sp|Q6FK48|SWR1_CANGA Helicase SWR1 OS=Candida glabrata GN=SWR1 P...   133   7e-31
sp|Q05471|SWR1_YEAST Helicase SWR1 OS=Saccharomyces cerevisiae G...   132   2e-30
sp|P38144|ISW1_YEAST ISWI chromatin-remodeling complex ATPase IS...   129   8e-30

>sp|Q6EVK6|BRM_ARATH ATP-dependent helicase BRM OS=Arabidopsis
            thaliana GN=BRM PE=1 SV=1
          Length = 2193

 Score =  302 bits (773), Expect = 9e-82
 Identities = 152/196 (77%), Positives = 170/196 (86%), Gaps = 4/196 (2%)
 Frame = -3

Query: 577  QGLSEEEVEEATIRARDEVDARPHSPD----RATESVSKYYSLAHAVNERIVRQPSMLRA 410
            QGLSEEEV  A   AR+EV  R    +    +   SV+KYY+LAHAVNE +VRQPSML+A
Sbjct: 919  QGLSEEEVRAAATCAREEVVIRNRFTEMNAPKENSSVNKYYTLAHAVNEVVVRQPSMLQA 978

Query: 409  GILRDYQLVGLQWMLSLYNNRLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVP 230
            G LRDYQLVGLQWMLSLYNN+LNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVP
Sbjct: 979  GTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVP 1038

Query: 229  NAVIVNWKSELLRWLPSVSCIFYVGGKEQRTKLYSQEVCALKFNVLVTTHEFIMRDRCKL 50
            NAV+VNWKSEL  WLPSVSCI+YVG K+QR+KL+SQEVCA+KFNVLVTT+EFIM DR KL
Sbjct: 1039 NAVLVNWKSELHTWLPSVSCIYYVGTKDQRSKLFSQEVCAMKFNVLVTTYEFIMYDRSKL 1098

Query: 49   SKVEWKYLIIDEAQEV 2
            SKV+WKY+IIDEAQ +
Sbjct: 1099 SKVDWKYIIIDEAQRM 1114


>sp|P51531|SMCA2_HUMAN Probable global transcription activator SNF2L2
            OS=Homo sapiens GN=SMARCA2 PE=1 SV=2
          Length = 1590

 Score =  177 bits (448), Expect = 4e-44
 Identities = 90/193 (46%), Positives = 131/193 (67%)
 Frame = -3

Query: 580  AQGLSEEEVEEATIRARDEVDARPHSPDRATESVSKYYSLAHAVNERIVRQPSMLRAGIL 401
            ++ +SE++ ++    A+ +VD   +S   +      YY++AHA++ER+ +Q ++L  G L
Sbjct: 666  SEEVSEKDAKQIIETAKQDVDDE-YSMQYSARGSQSYYTVAHAISERVEKQSALLINGTL 724

Query: 400  RDYQLVGLQWMLSLYNNRLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPNAV 221
            + YQL GL+WM+SLYNN LNGILADEMGLGKT+Q +ALI YLME K   GP+LIIVP + 
Sbjct: 725  KHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLST 784

Query: 220  IVNWKSELLRWLPSVSCIFYVGGKEQRTKLYSQEVCALKFNVLVTTHEFIMRDRCKLSKV 41
            + NW  E  +W PSV  I Y G    R  L  Q + + KFNVL+TT+E+I++D+  L+K+
Sbjct: 785  LSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQ-LRSGKFNVLLTTYEYIIKDKHILAKI 843

Query: 40   EWKYLIIDEAQEV 2
             WKY+I+DE   +
Sbjct: 844  RWKYMIVDEGHRM 856


>sp|P25439|BRM_DROME ATP-dependent helicase brm OS=Drosophila
            melanogaster GN=brm PE=1 SV=2
          Length = 1638

 Score =  174 bits (442), Expect = 2e-43
 Identities = 80/178 (44%), Positives = 122/178 (68%)
 Frame = -3

Query: 535  ARDEVDARPHSPDRATESVSKYYSLAHAVNERIVRQPSMLRAGILRDYQLVGLQWMLSLY 356
            A+D +       D        YYS+AH ++E++V Q S++  G L++YQ+ GL+W++SLY
Sbjct: 729  AKDLITKAKVEDDEYRTEEQTYYSIAHTIHEKVVEQASIMVNGTLKEYQIKGLEWLVSLY 788

Query: 355  NNRLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPNAVIVNWKSELLRWLPSV 176
            NN LNGILADEMGLGKT+Q ++L+ YLM+ K   GP+LIIVP + + NW  E  +W P+V
Sbjct: 789  NNNLNGILADEMGLGKTIQTISLVTYLMDRKKVMGPYLIIVPLSTLPNWVLEFEKWAPAV 848

Query: 175  SCIFYVGGKEQRTKLYSQEVCALKFNVLVTTHEFIMRDRCKLSKVEWKYLIIDEAQEV 2
              + Y G  + R +L   ++ A KFNVL+TT+E++++D+  L+K++WKY+IIDE   +
Sbjct: 849  GVVSYKGSPQGR-RLLQNQMRATKFNVLLTTYEYVIKDKAVLAKIQWKYMIIDEGHRM 905


>sp|P51532|SMCA4_HUMAN Probable global transcription activator SNF2L4
            OS=Homo sapiens GN=SMARCA4 PE=1 SV=2
          Length = 1647

 Score =  172 bits (435), Expect = 1e-42
 Identities = 84/190 (44%), Positives = 124/190 (65%)
 Frame = -3

Query: 571  LSEEEVEEATIRARDEVDARPHSPDRATESVSKYYSLAHAVNERIVRQPSMLRAGILRDY 392
            +SE +       A+ +VD            +  YY++AHAV ER+ +Q +++  G+L+ Y
Sbjct: 698  VSEVDARHIIENAKQDVDDEYGVSQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQY 757

Query: 391  QLVGLQWMLSLYNNRLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPNAVIVN 212
            Q+ GL+W++SLYNN LNGILADEMGLGKT+Q +ALI YLME K   GP LIIVP + + N
Sbjct: 758  QIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSN 817

Query: 211  WKSELLRWLPSVSCIFYVGGKEQRTKLYSQEVCALKFNVLVTTHEFIMRDRCKLSKVEWK 32
            W  E  +W PSV  + Y G    R + +  ++ + KFNVL+TT+E+I++D+  L+K+ WK
Sbjct: 818  WAYEFDKWAPSVVKVSYKGSPAAR-RAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWK 876

Query: 31   YLIIDEAQEV 2
            Y+I+DE   +
Sbjct: 877  YMIVDEGHRM 886


>sp|P32597|STH1_YEAST Nuclear protein STH1/NPS1 OS=Saccharomyces
           cerevisiae GN=STH1 PE=1 SV=1
          Length = 1359

 Score =  169 bits (428), Expect = 9e-42
 Identities = 89/193 (46%), Positives = 123/193 (63%)
 Frame = -3

Query: 580 AQGLSEEEVEEATIRARDEVDARPHSPDRATESVSKYYSLAHAVNERIVRQPSMLRAGIL 401
           A+ L  EEV+  T   R++ D               YY +AH + E+I +QPS+L  G L
Sbjct: 426 AKILHGEEVQPITDEEREKTD---------------YYEVAHRIKEKIDKQPSILVGGTL 470

Query: 400 RDYQLVGLQWMLSLYNNRLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPNAV 221
           ++YQL GL+WM+SLYNN LNGILADEMGLGKT+Q ++LI YL E K + GP L+IVP + 
Sbjct: 471 KEYQLRGLEWMVSLYNNHLNGILADEMGLGKTIQSISLITYLYEVKKDIGPFLVIVPLST 530

Query: 220 IVNWKSELLRWLPSVSCIFYVGGKEQRTKLYSQEVCALKFNVLVTTHEFIMRDRCKLSKV 41
           I NW  E  +W PS++ I Y G   QR  L  Q +    F+VL+TT+E+I++D+  LSK 
Sbjct: 531 ITNWTLEFEKWAPSLNTIIYKGTPNQRHSLQHQ-IRVGNFDVLLTTYEYIIKDKSLLSKH 589

Query: 40  EWKYLIIDEAQEV 2
           +W ++IIDE   +
Sbjct: 590 DWAHMIIDEGHRM 602


>sp|P22082|SNF2_YEAST Transcription regulatory protein SNF2
            OS=Saccharomyces cerevisiae GN=SNF2 PE=1 SV=1
          Length = 1703

 Score =  167 bits (422), Expect = 5e-41
 Identities = 85/200 (42%), Positives = 126/200 (63%), Gaps = 8/200 (4%)
 Frame = -3

Query: 577  QGLSEEEVEEATIRARDEVDARPHSPDRATESVSK--------YYSLAHAVNERIVRQPS 422
            Q  ++E ++     A +EVD     P    E            YY++AH + E I +QPS
Sbjct: 701  QKYTKEMIDSHIKEASEEVDDLSMVPKMKDEEYDDDDDNSNVDYYNVAHRIKEDIKKQPS 760

Query: 421  MLRAGILRDYQLVGLQWMLSLYNNRLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHL 242
            +L  G L+DYQ+ GLQWM+SL+NN LNGILADEMGLGKT+Q ++L+ YL E K   GP+L
Sbjct: 761  ILVGGTLKDYQIKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTYLYEMKNIRGPYL 820

Query: 241  IIVPNAVIVNWKSELLRWLPSVSCIFYVGGKEQRTKLYSQEVCALKFNVLVTTHEFIMRD 62
            +IVP + + NW SE  +W P++  I + G   +R K    ++ A +F+V++TT E+I+++
Sbjct: 821  VIVPLSTLSNWSSEFAKWAPTLRTISFKGSPNER-KAKQAKIRAGEFDVVLTTFEYIIKE 879

Query: 61   RCKLSKVEWKYLIIDEAQEV 2
            R  LSKV+W ++IIDE   +
Sbjct: 880  RALLSKVKWVHMIIDEGHRM 899


>sp|Q9UTN6|SNF21_SCHPO Chromatin structure-remodeling complex
           subunit snf21 OS=Schizosaccharomyces pombe GN=snf21 PE=1
           SV=1
          Length = 1199

 Score =  165 bits (417), Expect = 2e-40
 Identities = 81/157 (51%), Positives = 110/157 (70%)
 Frame = -3

Query: 472 YYSLAHAVNERIVRQPSMLRAGILRDYQLVGLQWMLSLYNNRLNGILADEMGLGKTVQVM 293
           YY++AH + E +  QPS+L  G L++YQL GLQWM+SLYNN LNGILADEMGLGKT+Q +
Sbjct: 394 YYNVAHNIREVVTEQPSILVGGKLKEYQLRGLQWMISLYNNHLNGILADEMGLGKTIQTI 453

Query: 292 ALIAYLMEFKGNYGPHLIIVPNAVIVNWKSELLRWLPSVSCIFYVGGKEQRTKLYSQEVC 113
           +LI +L+E K   GP L+IVP + + NW  E  RW PS+  I Y G  + R  L+ Q V 
Sbjct: 454 SLITHLIEKKRQNGPFLVIVPLSTLTNWTMEFERWAPSIVKIVYKGPPQVRKALHPQ-VR 512

Query: 112 ALKFNVLVTTHEFIMRDRCKLSKVEWKYLIIDEAQEV 2
              F VL+TT+E+I++DR  LS+++W Y+IIDE   +
Sbjct: 513 HSNFQVLLTTYEYIIKDRPLLSRIKWIYMIIDEGHRM 549


>sp|O94421|SNF22_SCHPO SWI/SNF chromatin-remodeling complex subunit
            snf22 OS=Schizosaccharomyces pombe GN=snf22 PE=1 SV=2
          Length = 1680

 Score =  164 bits (416), Expect = 2e-40
 Identities = 84/190 (44%), Positives = 116/190 (61%)
 Frame = -3

Query: 571  LSEEEVEEATIRARDEVDARPHSPDRATESVSKYYSLAHAVNERIVRQPSMLRAGILRDY 392
            + +  +       +    A   +P    +    Y+ +AH ++E  V QP +   G L+DY
Sbjct: 814  IQQSNIHSGNTSGKGSNSAELEAPISEEDKNLDYFKVAHRIHEE-VEQPKIFVGGTLKDY 872

Query: 391  QLVGLQWMLSLYNNRLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPNAVIVN 212
            QL GL+WMLSLYNN LNGILADEMGLGKT+Q +A I YL+E K   GP LIIVP + + N
Sbjct: 873  QLKGLEWMLSLYNNNLNGILADEMGLGKTIQTIAFITYLIEKKNQQGPFLIIVPLSTLTN 932

Query: 211  WKSELLRWLPSVSCIFYVGGKEQRTKLYSQEVCALKFNVLVTTHEFIMRDRCKLSKVEWK 32
            W  E  +W PSV  I Y G  + R  L SQ + +  FNVL+TT E+I++DR  LS+++W 
Sbjct: 933  WIMEFEKWAPSVKKIAYKGPPQLRKTLQSQ-IRSSNFNVLLTTFEYIIKDRPLLSRIKWV 991

Query: 31   YLIIDEAQEV 2
            ++IIDE   +
Sbjct: 992  HMIIDEGHRI 1001


>sp|Q6PGB8|SMCA1_MOUSE Probable global transcription activator
           SNF2L1 OS=Mus musculus GN=Smarca1 PE=1 SV=1
          Length = 1046

 Score =  147 bits (372), Expect = 3e-35
 Identities = 70/179 (39%), Positives = 109/179 (60%)
 Frame = -3

Query: 538 RARDEVDARPHSPDRATESVSKYYSLAHAVNERIVRQPSMLRAGILRDYQLVGLQWMLSL 359
           R   E D    S  R T +V   + ++          PS ++ G LRDYQ+ GL W++SL
Sbjct: 152 RTEQEEDEELLSESRKTSNVCVRFEVS----------PSYVKGGPLRDYQIRGLNWLISL 201

Query: 358 YNNRLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPNAVIVNWKSELLRWLPS 179
           Y N +NGILADEMGLGKT+Q +AL+ YL  ++   GPH+++VP + + NW +E  RW+PS
Sbjct: 202 YENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPS 261

Query: 178 VSCIFYVGGKEQRTKLYSQEVCALKFNVLVTTHEFIMRDRCKLSKVEWKYLIIDEAQEV 2
           +  I +VG K+ R      E+   +++V VT++E +++++    K  W+YL+IDEA  +
Sbjct: 262 LRVICFVGDKDVRAAFIRDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRI 320


>sp|P28370|SMCA1_HUMAN Probable global transcription activator
           SNF2L1 OS=Homo sapiens GN=SMARCA1 PE=1 SV=2
          Length = 1054

 Score =  147 bits (372), Expect = 3e-35
 Identities = 70/179 (39%), Positives = 109/179 (60%)
 Frame = -3

Query: 538 RARDEVDARPHSPDRATESVSKYYSLAHAVNERIVRQPSMLRAGILRDYQLVGLQWMLSL 359
           R   E D    S  R T +V   + ++          PS ++ G LRDYQ+ GL W++SL
Sbjct: 148 RTEQEEDEELLSESRKTSNVCIRFEVS----------PSYVKGGPLRDYQIRGLNWLISL 197

Query: 358 YNNRLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPNAVIVNWKSELLRWLPS 179
           Y N +NGILADEMGLGKT+Q +AL+ YL  ++   GPH+++VP + + NW +E  RW+PS
Sbjct: 198 YENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPS 257

Query: 178 VSCIFYVGGKEQRTKLYSQEVCALKFNVLVTTHEFIMRDRCKLSKVEWKYLIIDEAQEV 2
           +  I +VG K+ R      E+   +++V VT++E +++++    K  W+YL+IDEA  +
Sbjct: 258 LRVICFVGDKDARAAFIRDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRI 316
tr_hit_id A9T357
Definition tr|A9T357|A9T357_PHYPA SWI/SNF class chromatin remodeling complex protein OS=Physcomitrella patens subsp. patens
Align length 194
Score (bit) 303.0
E-value 6.0e-81
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919483|Adiantum capillus-veneris mRNA, clone:
YMU001_000125_F02.
         (582 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9T357|A9T357_PHYPA SWI/SNF class chromatin remodeling comple...   303   6e-81
tr|A9RSB9|A9RSB9_PHYPA SWI/SNF class chromatin remodeling comple...   303   6e-81
tr|A7PZI5|A7PZI5_VITVI Chromosome chr15 scaffold_40, whole genom...   298   1e-79
tr|A4S0M0|A4S0M0_OSTLU Predicted protein (Fragment) OS=Ostreococ...   243   4e-63
tr|A5B1Q9|A5B1Q9_VITVI Putative uncharacterized protein OS=Vitis...   243   7e-63
tr|Q014M8|Q014M8_OSTTA Transcription regulatory protein SNF2, pu...   238   1e-61
tr|Q6Z7C5|Q6Z7C5_ORYSJ Os02g0114000 protein OS=Oryza sativa subs...   236   7e-61
tr|B8AGH3|B8AGH3_ORYSI Putative uncharacterized protein OS=Oryza...   236   7e-61
tr|B6DT55|B6DT55_ARATH Brahma variant OS=Arabidopsis thaliana GN...   236   7e-61
tr|A3A2E2|A3A2E2_ORYSJ Putative uncharacterized protein OS=Oryza...   236   7e-61
tr|A8IHT5|A8IHT5_CHLRE Predicted protein OS=Chlamydomonas reinha...   199   7e-50
tr|A9TXL2|A9TXL2_PHYPA SWI/SNF class chromatin remodeling comple...   198   2e-49
tr|Q656N0|Q656N0_ORYSJ Putative STH1 protein OS=Oryza sativa sub...   195   2e-48
tr|B8B0A6|B8B0A6_ORYSI Putative uncharacterized protein OS=Oryza...   195   2e-48
tr|A7NW95|A7NW95_VITVI Chromosome chr5 scaffold_2, whole genome ...   194   3e-48
tr|Q9SL27|Q9SL27_ARATH Putative SNF2 subfamily transcription reg...   191   2e-47
tr|Q9AUB4|Q9AUB4_ARATH Putative chromatin remodeling protein SYD...   188   2e-46
tr|Q5BN47|Q5BN47_ARATH SPLAYED splice variant OS=Arabidopsis tha...   188   2e-46
tr|Q3E9C2|Q3E9C2_ARATH Uncharacterized protein At5g19310.1 OS=Ar...   184   3e-45
tr|A7NWI8|A7NWI8_VITVI Chromosome chr5 scaffold_2, whole genome ...   183   7e-45
tr|A9S7V7|A9S7V7_PHYPA Chromatin remodeling complex SWI/SNF prot...   181   3e-44
tr|Q4PFD0|Q4PFD0_USTMA Putative uncharacterized protein OS=Ustil...   179   8e-44
tr|B8C1P2|B8C1P2_THAPS Predicted protein OS=Thalassiosira pseudo...   179   1e-43
tr|B7FTA0|B7FTA0_PHATR Predicted protein (Fragment) OS=Phaeodact...   179   1e-43
tr|A5ASC6|A5ASC6_VITVI Putative uncharacterized protein OS=Vitis...   179   1e-43
tr|B6P6N5|B6P6N5_BRAFL Putative uncharacterized protein OS=Branc...   179   1e-43
tr|B6NDF4|B6NDF4_BRAFL Putative uncharacterized protein (Fragmen...   179   1e-43
tr|A8N0T7|A8N0T7_COPC7 Putative uncharacterized protein OS=Copri...   179   1e-43
tr|Q55C32|Q55C32_DICDI SNF2-related domain-containing protein OS...   178   2e-43
tr|Q90755|Q90755_CHICK BRM protein OS=Gallus gallus GN=brm PE=2 ...   177   3e-43

>tr|A9T357|A9T357_PHYPA SWI/SNF class chromatin remodeling complex
            protein OS=Physcomitrella patens subsp. patens GN=CHR1534
            PE=4 SV=1
          Length = 2529

 Score =  303 bits (775), Expect = 6e-81
 Identities = 146/194 (75%), Positives = 172/194 (88%), Gaps = 1/194 (0%)
 Frame = -3

Query: 580  AQGLSEEEVEEATIRARDEVDARPH-SPDRATESVSKYYSLAHAVNERIVRQPSMLRAGI 404
            AQG SEEE ++A IRA +E +   + + +    SV+KYYSLAHAV+E+I +QPSML  G+
Sbjct: 1143 AQGYSEEEAQQAAIRASEEAEVNGYVNRNPLDSSVNKYYSLAHAVHEKIYKQPSMLAVGV 1202

Query: 403  LRDYQLVGLQWMLSLYNNRLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPNA 224
            LRDYQ+VGLQWMLSLYNNRLNGILADEMGLGKTVQVMALIAYLME+KGNYGPHLIIVPNA
Sbjct: 1203 LRDYQMVGLQWMLSLYNNRLNGILADEMGLGKTVQVMALIAYLMEYKGNYGPHLIIVPNA 1262

Query: 223  VIVNWKSELLRWLPSVSCIFYVGGKEQRTKLYSQEVCALKFNVLVTTHEFIMRDRCKLSK 44
            V+VNWKSEL RWLPSVSCI+YVG K+QR K++SQEVC++KFNVLVTT+EFIMRDR KL+K
Sbjct: 1263 VMVNWKSELTRWLPSVSCIYYVGHKDQRAKIFSQEVCSMKFNVLVTTYEFIMRDRSKLAK 1322

Query: 43   VEWKYLIIDEAQEV 2
            V+WKY+IIDEAQ +
Sbjct: 1323 VDWKYIIIDEAQRM 1336


>tr|A9RSB9|A9RSB9_PHYPA SWI/SNF class chromatin remodeling complex
            protein OS=Physcomitrella patens subsp. patens GN=CHR1520
            PE=4 SV=1
          Length = 2486

 Score =  303 bits (775), Expect = 6e-81
 Identities = 149/199 (74%), Positives = 170/199 (85%), Gaps = 6/199 (3%)
 Frame = -3

Query: 580  AQGLSEEEVEEATIRARDEVDAR------PHSPDRATESVSKYYSLAHAVNERIVRQPSM 419
            AQG SEEE ++A IRA +E +        PH       SV KYYSLAHAV+E+IV+QPSM
Sbjct: 1098 AQGYSEEEAQQAAIRASEEAEVNGYVNRVPHD-----SSVHKYYSLAHAVHEKIVKQPSM 1152

Query: 418  LRAGILRDYQLVGLQWMLSLYNNRLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLI 239
            L  G+LRDYQ+VGLQWMLSLYNNRLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLI
Sbjct: 1153 LAVGVLRDYQMVGLQWMLSLYNNRLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLI 1212

Query: 238  IVPNAVIVNWKSELLRWLPSVSCIFYVGGKEQRTKLYSQEVCALKFNVLVTTHEFIMRDR 59
            IVPNAV+VNWKSEL RWLPS SCI+YVG K+QR K++SQEVC++KFNVLVTT+EFIMRDR
Sbjct: 1213 IVPNAVMVNWKSELTRWLPSASCIYYVGHKDQRAKIFSQEVCSMKFNVLVTTYEFIMRDR 1272

Query: 58   CKLSKVEWKYLIIDEAQEV 2
             KL+KV+WKY+IIDEAQ +
Sbjct: 1273 SKLAKVDWKYIIIDEAQRM 1291


>tr|A7PZI5|A7PZI5_VITVI Chromosome chr15 scaffold_40, whole genome
            shotgun sequence OS=Vitis vinifera GN=GSVIVT00026891001
            PE=4 SV=1
          Length = 2105

 Score =  298 bits (763), Expect = 1e-79
 Identities = 151/195 (77%), Positives = 170/195 (87%), Gaps = 4/195 (2%)
 Frame = -3

Query: 574  GLSEEEVEEATIRARDEVDARPH----SPDRATESVSKYYSLAHAVNERIVRQPSMLRAG 407
            GLSEEEV  A   A +EV  R      +  + + SV+KYY+LAHAVNER++RQPSMLRAG
Sbjct: 903  GLSEEEVRTAATCAGEEVMIRNRFIEMNAPKESSSVNKYYTLAHAVNERVMRQPSMLRAG 962

Query: 406  ILRDYQLVGLQWMLSLYNNRLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPN 227
             LRDYQLVGLQWMLSLYNN+LNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPN
Sbjct: 963  TLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPN 1022

Query: 226  AVIVNWKSELLRWLPSVSCIFYVGGKEQRTKLYSQEVCALKFNVLVTTHEFIMRDRCKLS 47
            AV+VNWKSEL  WLPSVSCI+YVGGK+QR+KL+SQ VCA+KFNVLVTT+EFIM DR KLS
Sbjct: 1023 AVLVNWKSELHNWLPSVSCIYYVGGKDQRSKLFSQ-VCAMKFNVLVTTYEFIMYDRSKLS 1081

Query: 46   KVEWKYLIIDEAQEV 2
            KV+WKY+IIDEAQ +
Sbjct: 1082 KVDWKYIIIDEAQRM 1096


>tr|A4S0M0|A4S0M0_OSTLU Predicted protein (Fragment) OS=Ostreococcus
           lucimarinus (strain CCE9901) GN=CHR3508 PE=4 SV=1
          Length = 1156

 Score =  243 bits (621), Expect = 4e-63
 Identities = 124/198 (62%), Positives = 148/198 (74%), Gaps = 5/198 (2%)
 Frame = -3

Query: 580 AQGLSEEEV-----EEATIRARDEVDARPHSPDRATESVSKYYSLAHAVNERIVRQPSML 416
           A+GL+EEEV     E A   A D  +A         ++  +YY++AH+  E I  QP ML
Sbjct: 398 AKGLTEEEVKVVAEEAANSAAIDHGEAILDGAADGGDTKERYYAMAHSTQEIITHQPRML 457

Query: 415 RAGILRDYQLVGLQWMLSLYNNRLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLII 236
             G LRDYQLV LQWM+SLYNN+LNGILADEMGLGKTVQV ALIAYL E K N+GPHLII
Sbjct: 458 TFGKLRDYQLVSLQWMISLYNNKLNGILADEMGLGKTVQVCALIAYLFESKQNFGPHLII 517

Query: 235 VPNAVIVNWKSELLRWLPSVSCIFYVGGKEQRTKLYSQEVCALKFNVLVTTHEFIMRDRC 56
           VPNAVIVNWK+E+ RWLP +S +FYVG K+ R K++ Q+V  LKFNVLVT++EFIMRDR 
Sbjct: 518 VPNAVIVNWKAEIRRWLPKLSTVFYVGSKDARAKIFQQQVLQLKFNVLVTSYEFIMRDRS 577

Query: 55  KLSKVEWKYLIIDEAQEV 2
           KLSKV WKY+IIDEA  +
Sbjct: 578 KLSKVAWKYIIIDEAHRL 595


>tr|A5B1Q9|A5B1Q9_VITVI Putative uncharacterized protein OS=Vitis
            vinifera GN=VITISV_024679 PE=4 SV=1
          Length = 2238

 Score =  243 bits (619), Expect = 7e-63
 Identities = 130/195 (66%), Positives = 145/195 (74%), Gaps = 4/195 (2%)
 Frame = -3

Query: 574  GLSEEEVEEATIRARDEVDARPH----SPDRATESVSKYYSLAHAVNERIVRQPSMLRAG 407
            GLSEEEV  A   A +EV  R      +  + + SV+KYY+LAHAVNER++RQPSMLRAG
Sbjct: 955  GLSEEEVRTAATCAGEEVMIRNRFIEMNAPKESSSVNKYYTLAHAVNERVMRQPSMLRAG 1014

Query: 406  ILRDYQLVGLQWMLSLYNNRLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPN 227
             LRDYQLVGLQWMLSLYNN+LNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPN
Sbjct: 1015 TLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPN 1074

Query: 226  AVIVNWKSELLRWLPSVSCIFYVGGKEQRTKLYSQEVCALKFNVLVTTHEFIMRDRCKLS 47
            AV+VNWK                            EVCA+KFNVLVTT+EFIM DR KLS
Sbjct: 1075 AVLVNWK----------------------------EVCAMKFNVLVTTYEFIMYDRSKLS 1106

Query: 46   KVEWKYLIIDEAQEV 2
            KV+WKY+IIDEAQ +
Sbjct: 1107 KVDWKYIIIDEAQRM 1121


>tr|Q014M8|Q014M8_OSTTA Transcription regulatory protein SNF2,
            putative (ISS) OS=Ostreococcus tauri GN=Ot07g03780 PE=4
            SV=1
          Length = 1192

 Score =  238 bits (608), Expect = 1e-61
 Identities = 119/197 (60%), Positives = 148/197 (75%), Gaps = 5/197 (2%)
 Frame = -3

Query: 577  QGLSEEEV-----EEATIRARDEVDARPHSPDRATESVSKYYSLAHAVNERIVRQPSMLR 413
            +G++E+E+     E A   A +  +A         ++  +YY++AH+  E I  QP ML 
Sbjct: 414  KGMNEDELKIIAEEAANNAALENGEAILDGAVAGGDTKERYYAMAHSTQEIITHQPRMLT 473

Query: 412  AGILRDYQLVGLQWMLSLYNNRLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIV 233
             G LRDYQLV LQWM+SLYNN+LNGILADEMGLGKTVQV ALIAYL E K NYGPHLIIV
Sbjct: 474  FGQLRDYQLVSLQWMISLYNNKLNGILADEMGLGKTVQVCALIAYLFESKQNYGPHLIIV 533

Query: 232  PNAVIVNWKSELLRWLPSVSCIFYVGGKEQRTKLYSQEVCALKFNVLVTTHEFIMRDRCK 53
            PNAV+VNWK+E+ RWLP ++ +FYVG K+ R K++ Q+V  LKFNVLVT++EFIMRDR K
Sbjct: 534  PNAVVVNWKAEIKRWLPKLTSVFYVGTKDARAKIFQQQVSQLKFNVLVTSYEFIMRDRSK 593

Query: 52   LSKVEWKYLIIDEAQEV 2
            LSKV WKY+IIDEAQ +
Sbjct: 594  LSKVAWKYIIIDEAQRL 610


>tr|Q6Z7C5|Q6Z7C5_ORYSJ Os02g0114000 protein OS=Oryza sativa subsp.
            japonica GN=P0036E06.8 PE=4 SV=1
          Length = 2200

 Score =  236 bits (602), Expect = 7e-61
 Identities = 127/197 (64%), Positives = 144/197 (73%), Gaps = 4/197 (2%)
 Frame = -3

Query: 580  AQGLSEEEVEEATIRARDEVDAR----PHSPDRATESVSKYYSLAHAVNERIVRQPSMLR 413
            AQGLSEEEV+ A   A  EV  R      +  R   SV+KYY+LAHAVNER+ RQPS+LR
Sbjct: 899  AQGLSEEEVKAAAQCAGQEVMIRNTFSEMNAPRENTSVNKYYTLAHAVNERVTRQPSLLR 958

Query: 412  AGILRDYQLVGLQWMLSLYNNRLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIV 233
            AG LRDYQLVGLQWMLSLYNN+LNGILADEMGLGKTVQVM+LIAYLMEFKGNYGPHLIIV
Sbjct: 959  AGTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMSLIAYLMEFKGNYGPHLIIV 1018

Query: 232  PNAVIVNWKSELLRWLPSVSCIFYVGGKEQRTKLYSQEVCALKFNVLVTTHEFIMRDRCK 53
            PNAV+VNWK                            EV A+KFNVLVTT+EF+M DR K
Sbjct: 1019 PNAVLVNWK----------------------------EVLAVKFNVLVTTYEFVMYDRSK 1050

Query: 52   LSKVEWKYLIIDEAQEV 2
            LS+++WKY+IIDEAQ +
Sbjct: 1051 LSRIDWKYIIIDEAQRM 1067


>tr|B8AGH3|B8AGH3_ORYSI Putative uncharacterized protein OS=Oryza
            sativa subsp. indica GN=OsI_05562 PE=4 SV=1
          Length = 2184

 Score =  236 bits (602), Expect = 7e-61
 Identities = 127/197 (64%), Positives = 144/197 (73%), Gaps = 4/197 (2%)
 Frame = -3

Query: 580  AQGLSEEEVEEATIRARDEVDAR----PHSPDRATESVSKYYSLAHAVNERIVRQPSMLR 413
            AQGLSEEEV+ A   A  EV  R      +  R   SV+KYY+LAHAVNER+ RQPS+LR
Sbjct: 899  AQGLSEEEVKAAAQCAGQEVMIRNTFSEMNAPRENTSVNKYYTLAHAVNERVTRQPSLLR 958

Query: 412  AGILRDYQLVGLQWMLSLYNNRLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIV 233
            AG LRDYQLVGLQWMLSLYNN+LNGILADEMGLGKTVQVM+LIAYLMEFKGNYGPHLIIV
Sbjct: 959  AGTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMSLIAYLMEFKGNYGPHLIIV 1018

Query: 232  PNAVIVNWKSELLRWLPSVSCIFYVGGKEQRTKLYSQEVCALKFNVLVTTHEFIMRDRCK 53
            PNAV+VNWK                            EV A+KFNVLVTT+EF+M DR K
Sbjct: 1019 PNAVLVNWK----------------------------EVLAVKFNVLVTTYEFVMYDRSK 1050

Query: 52   LSKVEWKYLIIDEAQEV 2
            LS+++WKY+IIDEAQ +
Sbjct: 1051 LSRIDWKYIIIDEAQRM 1067


>tr|B6DT55|B6DT55_ARATH Brahma variant OS=Arabidopsis thaliana GN=BRM
            PE=2 SV=1
          Length = 1077

 Score =  236 bits (602), Expect = 7e-61
 Identities = 120/156 (76%), Positives = 133/156 (85%), Gaps = 4/156 (2%)
 Frame = -3

Query: 577  QGLSEEEVEEATIRARDEVDARPHSPD----RATESVSKYYSLAHAVNERIVRQPSMLRA 410
            QGLSEEEV  A   AR+EV  R    +    +   SV+KYY+LAHAVNE +VRQPSML+A
Sbjct: 919  QGLSEEEVRAAATCAREEVVIRNRFTEMNAPKENSSVNKYYTLAHAVNEVVVRQPSMLQA 978

Query: 409  GILRDYQLVGLQWMLSLYNNRLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVP 230
            G LRDYQLVGLQWMLSLYNN+LNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVP
Sbjct: 979  GTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVP 1038

Query: 229  NAVIVNWKSELLRWLPSVSCIFYVGGKEQRTKLYSQ 122
            NAV+VNWKSEL  WLPSVSCI+YVG K+QR+KL+SQ
Sbjct: 1039 NAVLVNWKSELHTWLPSVSCIYYVGTKDQRSKLFSQ 1074


>tr|A3A2E2|A3A2E2_ORYSJ Putative uncharacterized protein OS=Oryza
            sativa subsp. japonica GN=OsJ_004964 PE=4 SV=1
          Length = 2233

 Score =  236 bits (602), Expect = 7e-61
 Identities = 127/197 (64%), Positives = 144/197 (73%), Gaps = 4/197 (2%)
 Frame = -3

Query: 580  AQGLSEEEVEEATIRARDEVDAR----PHSPDRATESVSKYYSLAHAVNERIVRQPSMLR 413
            AQGLSEEEV+ A   A  EV  R      +  R   SV+KYY+LAHAVNER+ RQPS+LR
Sbjct: 899  AQGLSEEEVKAAAQCAGQEVMIRNTFSEMNAPRENTSVNKYYTLAHAVNERVTRQPSLLR 958

Query: 412  AGILRDYQLVGLQWMLSLYNNRLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIV 233
            AG LRDYQLVGLQWMLSLYNN+LNGILADEMGLGKTVQVM+LIAYLMEFKGNYGPHLIIV
Sbjct: 959  AGTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMSLIAYLMEFKGNYGPHLIIV 1018

Query: 232  PNAVIVNWKSELLRWLPSVSCIFYVGGKEQRTKLYSQEVCALKFNVLVTTHEFIMRDRCK 53
            PNAV+VNWK                            EV A+KFNVLVTT+EF+M DR K
Sbjct: 1019 PNAVLVNWK----------------------------EVLAVKFNVLVTTYEFVMYDRSK 1050

Query: 52   LSKVEWKYLIIDEAQEV 2
            LS+++WKY+IIDEAQ +
Sbjct: 1051 LSRIDWKYIIIDEAQRM 1067