BP919484
Clone id YMU001_000125_F03
Library
Length 338
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000125_F03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
AATGCAAACAAATGCTGCAGAGTCTCCTAGTGGCTGATGTCCAAAATATAGAAAATTTGG
AGGAGATCTCAAATATGGAGATAGTGCGTGCAAAGGGTGATGGGCCTAATCTGGCTACTG
TTGACAGTGATGCTGTTATAATCGAGAAAGCACAATATTATACTGACCATCTTGACCAGC
TCTTAAAAGAACTCGAAATCAAGTATGAAGAGGCTATGGATCTACGTGTCAGAGCTATGG
TTGTCAATAACTCTTTGATGATGCTGAATAATCCTGTTGATGATGAAAAGATCCGAAAGA
TAACACAGTATGTGCGCGAAAAGCTGCATCTGGAGGTG
■■Homology search results ■■ -
sp_hit_id Q8IWJ2
Definition sp|Q8IWJ2|GCC2_HUMAN GRIP and coiled-coil domain-containing protein 2 OS=Homo sapiens
Align length 68
Score (bit) 31.2
E-value 1.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919484|Adiantum capillus-veneris mRNA, clone:
YMU001_000125_F03.
(338 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q8IWJ2|GCC2_HUMAN GRIP and coiled-coil domain-containing prot... 31 1.7
sp|Q49LS8|XKR6_TETNG XK-related protein 6 OS=Tetraodon nigroviri... 30 2.9
sp|A1URW5|EX7S_BARBK Exodeoxyribonuclease 7 small subunit OS=Bar... 29 6.4
sp|Q8U4K6|CPGS_PYRFU Cyclic 2,3-diphosphoglycerate synthetase OS... 29 6.4

>sp|Q8IWJ2|GCC2_HUMAN GRIP and coiled-coil domain-containing protein 2
OS=Homo sapiens GN=GCC2 PE=1 SV=3
Length = 1583

Score = 31.2 bits (69), Expect = 1.7
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 8/68 (11%)
Frame = +3

Query: 30 VADVQNIENLEEISNME--------IVRAKGDGPNLATVDSDAVIIEKAQYYTDHLDQLL 185
V+ Q+++NL E N + + R +G+G + T D+++V A YT L+QLL
Sbjct: 1384 VSSQQSLKNLRERRNTDLPLLDMHTVTREEGEG--METTDTESV--SSASTYTQSLEQLL 1439

Query: 186 KELEIKYE 209
E K E
Sbjct: 1440 NSPETKLE 1447


>sp|Q49LS8|XKR6_TETNG XK-related protein 6 OS=Tetraodon nigroviridis
GN=xkr6 PE=2 SV=1
Length = 578

Score = 30.4 bits (67), Expect = 2.9
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +1

Query: 7 NKCCRVS*WLMSKI*KIWRRSQIWR 81
+KCCR+S W+ + I++ Q+WR
Sbjct: 166 DKCCRLSVWIWQTVIHIFQLGQVWR 190


>sp|A1URW5|EX7S_BARBK Exodeoxyribonuclease 7 small subunit
OS=Bartonella bacilliformis (strain ATCC 35685 / KC583)
GN=xseB PE=3 SV=1
Length = 84

Score = 29.3 bits (64), Expect = 6.4
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Frame = +3

Query: 12 MLQSLLVADVQNIENLEEISNMEIV---RAKGDGPNLATVDSDAVIIEKAQYYTDHLDQL 182
M Q + D+ + E + +E++ +GD P ++D I E+ + +H D+L
Sbjct: 1 MKQEIKKDDISGLSFEEALKQLEVIVENLERGDVPLEQSID----IYERGEALKNHCDKL 56

Query: 183 LKELEIKYEE 212
LK E K E+
Sbjct: 57 LKVAEAKIEK 66


>sp|Q8U4K6|CPGS_PYRFU Cyclic 2,3-diphosphoglycerate synthetase
OS=Pyrococcus furiosus GN=cpgS PE=3 SV=1
Length = 431

Score = 29.3 bits (64), Expect = 6.4
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Frame = +3

Query: 72 NMEIVRAKGDGPNLATVDSDAVI-IEKAQYYTDHLDQLLKELEIKYEEAMDLRVRAXXXX 248
N +I+ +G GP V +D I I A + T+ ++Q L I + + + +
Sbjct: 231 NPDIIVFEGSGPTFPNVLADGFITITSAIHGTEKIEQYFGPLRIGLADIVVVTMA----- 285

Query: 249 XXXXXXXXPVDDEKIRKITQYVRE 320
V +EK+++ITQ +RE
Sbjct: 286 -------DSVSEEKLKRITQAIRE 302


tr_hit_id A7QPL5
Definition tr|A7QPL5|A7QPL5_VITVI Chromosome chr10 scaffold_138, whole genome shotgun sequence OS=Vitis vinifera
Align length 51
Score (bit) 35.8
E-value 1.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919484|Adiantum capillus-veneris mRNA, clone:
YMU001_000125_F03.
(338 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A7QPL5|A7QPL5_VITVI Chromosome chr10 scaffold_138, whole geno... 36 1.1
tr|Q5NT35|Q5NT35_ENTHI Small GTPase EhRabD2 (Fragment) OS=Entamo... 35 2.5
tr|B0EGQ1|B0EGQ1_ENTDI Small GTPase rabd, putative OS=Entamoeba ... 34 4.2
tr|B1WS27|B1WS27_CYAA5 Putative uncharacterized protein OS=Cyano... 33 7.2
tr|Q4Y7E9|Q4Y7E9_PLACH Putative uncharacterized protein OS=Plasm... 33 9.3

>tr|A7QPL5|A7QPL5_VITVI Chromosome chr10 scaffold_138, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00002988001
PE=4 SV=1
Length = 102

Score = 35.8 bits (81), Expect = 1.1
Identities = 19/51 (37%), Positives = 28/51 (54%)
Frame = +3

Query: 141 IEKAQYYTDHLDQLLKELEIKYEEAMDLRVRAXXXXXXXXXXXXPVDDEKI 293
+EKA+ YT L+ + L+ K+EEA ++ VRA PV +EKI
Sbjct: 34 VEKAEAYTKDLEDICNMLKKKHEEAKEILVRAIVNNNNLLMVNHPVYEEKI 84


>tr|Q5NT35|Q5NT35_ENTHI Small GTPase EhRabD2 (Fragment) OS=Entamoeba
histolytica GN=EhRabD2 PE=4 SV=1
Length = 183

Score = 34.7 bits (78), Expect = 2.5
Identities = 17/69 (24%), Positives = 35/69 (50%)
Frame = +3

Query: 6 KQMLQSLLVADVQNIENLEEISNMEIVRAKGDGPNLATVDSDAVIIEKAQYYTDHLDQLL 185
+ + ++++ DV N E+ E I N K DG ++ + + + +E + ++
Sbjct: 67 RNAMAAIIMFDVSNKESFENIPNWVEQCCKSDGKHIIFIAGNKIDLENRVVSKEEAEEKA 126

Query: 186 KELEIKYEE 212
KEL++KY E
Sbjct: 127 KELKLKYFE 135


>tr|B0EGQ1|B0EGQ1_ENTDI Small GTPase rabd, putative OS=Entamoeba
dispar SAW760 GN=EDI_282620 PE=3 SV=1
Length = 287

Score = 33.9 bits (76), Expect = 4.2
Identities = 17/69 (24%), Positives = 36/69 (52%)
Frame = +3

Query: 6 KQMLQSLLVADVQNIENLEEISNMEIVRAKGDGPNLATVDSDAVIIEKAQYYTDHLDQLL 185
+ + ++++ DV N E+ E +SN K +G ++ + + + +E + ++
Sbjct: 171 RNAMATIIMFDVSNKESFENVSNWVEQCCKYNGKHIIFLAGNKIDLENRVVSKEEAEEKA 230

Query: 186 KELEIKYEE 212
KELE+KY E
Sbjct: 231 KELELKYFE 239


>tr|B1WS27|B1WS27_CYAA5 Putative uncharacterized protein
OS=Cyanothece (strain ATCC 51142) GN=cce_0870 PE=4 SV=1
Length = 421

Score = 33.1 bits (74), Expect = 7.2
Identities = 23/69 (33%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Frame = +3

Query: 9 QMLQSLLVADVQNIENLEEISNMEIVRAKGDGPN-LATVDSDAVIIEKAQYYTDHLDQLL 185
Q+ SLL A+V E N E++RA+G+ + ++ V S V +E+A+ D L+QL
Sbjct: 102 QLDDSLLQAEVGRAEAELAALNSEVIRAQGEVKSAISAVASAKVQLEQAKTDADRLEQLY 161

Query: 186 KELEIKYEE 212
++ I +E
Sbjct: 162 EQGAIALQE 170


>tr|Q4Y7E9|Q4Y7E9_PLACH Putative uncharacterized protein
OS=Plasmodium chabaudi GN=PC000407.00.0 PE=4 SV=1
Length = 236

Score = 32.7 bits (73), Expect = 9.3
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Frame = +3

Query: 6 KQMLQSLLVADVQNIENLEE-ISNMEIVRAKGDGPNLATVDSDAVIIEKAQYYTDHLDQL 182
K + QS+ ++D ++ N E ISN + ++ KGD ++ IE Y ++ +
Sbjct: 64 KNLDQSISMSDDESNNNNESNISNFDDIKDKGDAKKRKEMEEKLKYIEN---YRNYAKDI 120

Query: 183 LKELEIKYEEAMD 221
LK +E K E+ D
Sbjct: 121 LKNVEFKCEDVSD 133