BP919486 |
Clone id |
YMU001_000125_F05 |
Library |
YMU01 |
Length |
475 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000125_F05. |
Accession |
BP919486 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
AGAAGCTCGAAAGCAGTTTCTTGAGGTTGGACAAGATAGGAGGCCTTTGATGCAAAGGGC ATATGAAGTTTTCAAGAAGGGTGGTAATCCAGGTGATCTCATACATGAATTTAAAGATGG TCAACCGTATGAGGTCTTTTATGCACATCTATATGCAGGCCTGTACCATGAATCTGAGGG AGATTCTGAGGCTGCCAAATCGGCTATGGTAGCTGCTTGCAGAACACCTTATGGTATTCG ATCTGGAGACTACATGGCATCACTAGCAAAGGTCCACTGCAAGTGTCGGGACTGGGACCT ATGAGAGACTCAGGATTCGGGACATGGGCTGAGGTTCACTGACAATTGGGCAAGCTTCTC TTGGTATATATACTTCATTCAGATTCTCACAAGCATGGCTGACAGGTATTACAATCTAGA AAGACAAAACAACTTCAATCATCTCATTCCATGCAGCAGTTCACAGCAGAGAATG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q3SID4 |
Definition |
sp|Q3SID4|MNMC_THIDA tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein mnmC OS=Thiobacillus denitrificans (strain ATCC 25259) |
Align length |
84 |
Score (bit) |
32.7 |
E-value |
0.77 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q8GUK5 |
Definition |
tr|Q8GUK5|Q8GUK5_ARATH Putative uncharacterized protein (At3g05625) OS=Arabidopsis thaliana |
Align length |
93 |
Score (bit) |
129.0 |
E-value |
9.0e-29 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP919486|Adiantum capillus-veneris mRNA, clone: YMU001_000125_F05. (460 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q8GUK5|Q8GUK5_ARATH Putative uncharacterized protein (At3g056... 129 9e-29 tr|B6SRQ6|B6SRQ6_MAIZE TPR repeat OS=Zea mays PE=2 SV=1 122 9e-27 tr|A9NZ23|A9NZ23_PICSI Putative uncharacterized protein OS=Picea... 121 2e-26 tr|B7FKP3|B7FKP3_MEDTR Putative uncharacterized protein OS=Medic... 116 5e-25 tr|A5AP52|A5AP52_VITVI Putative uncharacterized protein OS=Vitis... 112 7e-24 tr|A7PRZ7|A7PRZ7_VITVI Chromosome chr14 scaffold_27, whole genom... 112 1e-23 tr|A9TX28|A9TX28_PHYPA Predicted protein OS=Physcomitrella paten... 111 2e-23 tr|Q2HW44|Q2HW44_MEDTR TPR repeat OS=Medicago truncatula GN=MtrD... 106 7e-22 tr|A8IKA9|A8IKA9_CHLRE Predicted protein OS=Chlamydomonas reinha... 94 4e-18 tr|B8A7I6|B8A7I6_ORYSI Putative uncharacterized protein OS=Oryza... 91 2e-17 tr|A2ZST4|A2ZST4_ORYSJ Putative uncharacterized protein OS=Oryza... 91 2e-17 tr|A4RV00|A4RV00_OSTLU Predicted protein (Fragment) OS=Ostreococ... 68 3e-10 tr|B5W0I9|B5W0I9_SPIMA TPR repeat-containing protein OS=Arthrosp... 58 3e-07 tr|B7G6H5|B7G6H5_PHATR Predicted protein OS=Phaeodactylum tricor... 57 5e-07 tr|A0YQA3|A0YQA3_9CYAN Expressed protein OS=Lyngbya sp. PCC 8106... 56 1e-06 tr|Q01C43|Q01C43_OSTTA Chromosome 03 contig 1, DNA sequence OS=O... 52 1e-05 tr|B2J734|B2J734_NOSP7 Expressed protein OS=Nostoc punctiforme (... 51 3e-05 tr|Q3MBA8|Q3MBA8_ANAVT Expressed protein OS=Anabaena variabilis ... 50 6e-05 tr|B8HRQ9|B8HRQ9_9CHRO Putative uncharacterized protein OS=Cyano... 50 7e-05 tr|A3ZQC1|A3ZQC1_9PLAN Expressed protein OS=Blastopirellula mari... 36 0.83 tr|B5YLR8|B5YLR8_THAPS Predicted protein OS=Thalassiosira pseudo... 36 1.1 tr|A9BF80|A9BF80_PETMO TPR repeat-containing protein OS=Petrotog... 34 3.2 tr|A8UXZ6|A8UXZ6_9AQUI Molybdate periplasmic binding protein OS=... 33 5.4 tr|A5HW76|A5HW76_9STRA Photosystem I P700 chlorophyll A apoprote... 33 5.4 tr|B8PA50|B8PA50_9APHY Predicted protein OS=Postia placenta Mad-... 33 7.0 tr|Q4P576|Q4P576_USTMA Putative uncharacterized protein OS=Ustil... 33 7.1 tr|Q7UIN4|Q7UIN4_RHOBA Putative uncharacterized protein OS=Rhodo... 33 9.2 tr|A6LED4|A6LED4_PARD8 Putative outer membrane protein, probably... 33 9.2 tr|Q8MAH7|Q8MAH7_9RHOD Photosystem I P700 chlorophyll A apoprote... 33 9.2 tr|Q5VKA2|Q5VKA2_9PHAE Photosystem I P700 chlorophyll A apoprote... 33 9.2
>tr|Q8GUK5|Q8GUK5_ARATH Putative uncharacterized protein (At3g05625) OS=Arabidopsis thaliana GN=At3g05625 PE=2 SV=1 Length = 257
Score = 129 bits (323), Expect = 9e-29 Identities = 59/93 (63%), Positives = 72/93 (77%) Frame = +2
Query: 2 FLEVGQDRRPLMQRAYEVFKKGGNPGDLIHEFKDGQPYEVFYAHLYAGLYHESEGDSEAA 181 FLEVG+D RP+M+ AY +FK GG+P L+++F GQ E FYA LYAGLY+E+EG SE A Sbjct: 160 FLEVGRDSRPVMREAYNLFKNGGDPEKLVNDFSSGQASEYFYASLYAGLYYEAEGKSENA 219
Query: 182 KSAMVAACRTPYGIRSGDYMASLAKVHCKCRDW 280 K + AAC +PYG RS DYMASLAKVHC CR+W Sbjct: 220 KFHLTAACGSPYGQRSDDYMASLAKVHCLCRNW 252
>tr|B6SRQ6|B6SRQ6_MAIZE TPR repeat OS=Zea mays PE=2 SV=1 Length = 261
Score = 122 bits (306), Expect = 9e-27 Identities = 55/93 (59%), Positives = 72/93 (77%) Frame = +2
Query: 2 FLEVGQDRRPLMQRAYEVFKKGGNPGDLIHEFKDGQPYEVFYAHLYAGLYHESEGDSEAA 181 FLEVG D RP+M+ AY + + G +P L+ +F G EVFY+ LYAGLY+ES+ D++ A Sbjct: 166 FLEVGLDSRPVMREAYALLRSGADPEKLVAKFSSGTDGEVFYSSLYAGLYYESQKDADMA 225
Query: 182 KSAMVAACRTPYGIRSGDYMASLAKVHCKCRDW 280 KS +VAAC++PYG RSGDYMASLA VHC+CR+W Sbjct: 226 KSHIVAACKSPYGSRSGDYMASLALVHCQCRNW 258
>tr|A9NZ23|A9NZ23_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 275
Score = 121 bits (303), Expect = 2e-26 Identities = 56/95 (58%), Positives = 74/95 (77%) Frame = +2
Query: 2 FLEVGQDRRPLMQRAYEVFKKGGNPGDLIHEFKDGQPYEVFYAHLYAGLYHESEGDSEAA 181 FLEVG D RP+M++AY +FK GG+P ++I EF + + FYA LYA LY+E++ D AA Sbjct: 175 FLEVGLDPRPVMRKAYLMFKNGGDPQEIITEFSNRREQYYFYAALYASLYYEAQKDPIAA 234
Query: 182 KSAMVAACRTPYGIRSGDYMASLAKVHCKCRDWDL 286 ++AM+AA +PYG+RSGDYMASLAKVHCKCR W + Sbjct: 235 EAAMIAASCSPYGLRSGDYMASLAKVHCKCRGWKI 269
>tr|B7FKP3|B7FKP3_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 265
Score = 116 bits (291), Expect = 5e-25 Identities = 52/94 (55%), Positives = 72/94 (76%) Frame = +2
Query: 2 FLEVGQDRRPLMQRAYEVFKKGGNPGDLIHEFKDGQPYEVFYAHLYAGLYHESEGDSEAA 181 +LEVG+D RP+M+ Y +FK GG+P L+ F + + + FYA LYAGLY+ES+ +S+AA Sbjct: 170 YLEVGRDPRPVMRETYNMFKDGGDPEKLVGAFSNSRESDYFYASLYAGLYYESQNESDAA 229
Query: 182 KSAMVAACRTPYGIRSGDYMASLAKVHCKCRDWD 283 K +VAAC++ YG RS DYMASL+KVHC CR+W+ Sbjct: 230 KVHIVAACKSLYGQRSDDYMASLSKVHCLCRNWN 263
>tr|A5AP52|A5AP52_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_004109 PE=4 SV=1 Length = 237
Score = 112 bits (281), Expect = 7e-24 Identities = 54/93 (58%), Positives = 68/93 (73%) Frame = +2
Query: 2 FLEVGQDRRPLMQRAYEVFKKGGNPGDLIHEFKDGQPYEVFYAHLYAGLYHESEGDSEAA 181 FLE RP+M+ AY +FK GG+P L+ +F Q E FYA LYAGLY+ES+ DS +A Sbjct: 144 FLEANP--RPVMREAYNMFKDGGDPEKLVAQFSGNQVGEYFYASLYAGLYYESQNDSGSA 201
Query: 182 KSAMVAACRTPYGIRSGDYMASLAKVHCKCRDW 280 K ++AAC++PYG RS DYMASLAKVHC CR+W Sbjct: 202 KLHLLAACQSPYGQRSDDYMASLAKVHCLCRNW 234
>tr|A7PRZ7|A7PRZ7_VITVI Chromosome chr14 scaffold_27, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00022696001 PE=4 SV=1 Length = 247
Score = 112 bits (279), Expect = 1e-23 Identities = 51/87 (58%), Positives = 64/87 (73%) Frame = +2
Query: 20 DRRPLMQRAYEVFKKGGNPGDLIHEFKDGQPYEVFYAHLYAGLYHESEGDSEAAKSAMVA 199 D RP+M+ AY +FK GG+P L+ +F Q E FYA LYAGLY+ES+ D +AK ++A Sbjct: 158 DPRPVMREAYNMFKDGGDPEKLVAQFSGNQAGEYFYASLYAGLYYESQNDPGSAKLHLLA 217
Query: 200 ACRTPYGIRSGDYMASLAKVHCKCRDW 280 AC++PYG RS DYMASLAKVHC CR W Sbjct: 218 ACQSPYGQRSDDYMASLAKVHCLCRSW 244
>tr|A9TX28|A9TX28_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_199147 PE=4 SV=1 Length = 203
Score = 111 bits (277), Expect = 2e-23 Identities = 51/93 (54%), Positives = 70/93 (75%) Frame = +2
Query: 2 FLEVGQDRRPLMQRAYEVFKKGGNPGDLIHEFKDGQPYEVFYAHLYAGLYHESEGDSEAA 181 FL+VG+D RP+M+ AYE+F+ G + +L+ E + ++ FYA+LY GLY+ES+ SEAA Sbjct: 102 FLKVGRDSRPVMRAAYELFRDGVDTKELL-ELANANAHDFFYAYLYVGLYYESQKKSEAA 160
Query: 182 KSAMVAACRTPYGIRSGDYMASLAKVHCKCRDW 280 K A+ A +PYG+RSGDYMA+LAKVHC CR W Sbjct: 161 KEAITTAVSSPYGLRSGDYMATLAKVHCACRGW 193
>tr|Q2HW44|Q2HW44_MEDTR TPR repeat OS=Medicago truncatula GN=MtrDRAFT_AC147963g33v2 PE=4 SV=2 Length = 263
Score = 106 bits (264), Expect = 7e-22 Identities = 47/86 (54%), Positives = 65/86 (75%) Frame = +2
Query: 26 RPLMQRAYEVFKKGGNPGDLIHEFKDGQPYEVFYAHLYAGLYHESEGDSEAAKSAMVAAC 205 RP+M+ Y +FK GG+P L+ F + + + FYA LYAGLY+ES+ +S+AAK +VAAC Sbjct: 176 RPVMRETYNMFKDGGDPEKLVGAFSNSRESDYFYASLYAGLYYESQNESDAAKVHIVAAC 235
Query: 206 RTPYGIRSGDYMASLAKVHCKCRDWD 283 ++ YG RS DYMASL+KVHC CR+W+ Sbjct: 236 KSLYGQRSDDYMASLSKVHCLCRNWN 261
>tr|A8IKA9|A8IKA9_CHLRE Predicted protein OS=Chlamydomonas reinhardtii GN=TPR2 PE=4 SV=1 Length = 254
Score = 93.6 bits (231), Expect = 4e-18 Identities = 49/110 (44%), Positives = 63/110 (57%), Gaps = 15/110 (13%) Frame = +2
Query: 2 FLEVGQDRRPLMQRAYEVFKKGGNPGDLIHEFKDGQPYEVFYAHL--------------- 136 FLEVG+D RP+M+ AYE FK G P ++ + D ++ FY L Sbjct: 139 FLEVGRDSRPVMRAAYECFKTGQPPEKIMAQVTDNGGHDTFYGLLVLIPTHPNCKPSSSQ 198
Query: 137 YAGLYHESEGDSEAAKSAMVAACRTPYGIRSGDYMASLAKVHCKCRDWDL 286 Y GL+HE+EGD A+ A+ AA TPY SGDYMASLA+VHC R W + Sbjct: 199 YVGLWHEAEGDKAEAEKAVTAAVATPYARLSGDYMASLARVHCLRRGWQV 248
>tr|B8A7I6|B8A7I6_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_01794 PE=4 SV=1 Length = 262
Score = 91.3 bits (225), Expect = 2e-17 Identities = 44/87 (50%), Positives = 58/87 (66%) Frame = +2
Query: 2 FLEVGQDRRPLMQRAYEVFKKGGNPGDLIHEFKDGQPYEVFYAHLYAGLYHESEGDSEAA 181 FLEVG D R +M+ AY +FK GG+P L F G E+FY+ LY GLY+ES+ D+E A Sbjct: 162 FLEVGLDSRSVMREAYALFKDGGDPEKLASNFSSGSEGEIFYSSLYTGLYYESQKDAELA 221
Query: 182 KSAMVAACRTPYGIRSGDYMASLAKVH 262 KS +VAACR+PYG RS S +++ Sbjct: 222 KSHIVAACRSPYGSRSSIPTCSKVQIY 248
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