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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP919493
Clone id YMU001_000125_F12
Library
Length 504
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000125_F12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
CATAGCTGCTGGCATCTTGTCCTATTTTGTCCAAGTGCTGAGTTGTTTTTGACTCCATCC
TGCTATCACTAAACTCCACCTTTCTAACTGTGTCATTGGCCAACATAGGAATCTCTCTAT
TGGAACAATCGGCCAGTCCAACACCAGTGGTCCCTTCACATGTTGGAATCTCGTTAACAG
CATCTACAGAATTCACCATCATCGCCTCCCTAGGGGCCTCTGTTGTGGTACCAGTAACAT
CTGGCATGACATCTTTCCTTACAGCAGTTCTGGAATCAAATTTCTCATCCACCTAGTGCT
TCATCACGGATAACCATCTCCGCAGTGATTGCCCTTTCACTTGGTATATGCGGTATGCCA
ACCAGCTCTAATGCTTTAGCATAGGCCATTACTTGCCTATCTTTTGCTTCATCAGCACTT
TTTGGAGTCCACAACTCCCCTTGTGAAAAAGGCATTATTGGTCTGTTGAATGATGGCTCC
CTACCAAAATCCTCCTGCTGCACA
■■Homology search results ■■ -
sp_hit_id Q01589
Definition sp|Q01589|SED1_YEAST Cell wall protein SED1 OS=Saccharomyces cerevisiae
Align length 47
Score (bit) 33.1
E-value 0.75
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919493|Adiantum capillus-veneris mRNA, clone:
YMU001_000125_F12.
         (504 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q01589|SED1_YEAST Cell wall protein SED1 OS=Saccharomyces cer...    33   0.75 
sp|P36745|VL2_HPV07 Minor capsid protein L2 OS=Human papillomavi...    32   1.3  
sp|P38894|FLO5_YEAST Flocculation protein FLO5 OS=Saccharomyces ...    32   2.2  
sp|Q28938|IL12B_PIG Interleukin-12 subunit beta OS=Sus scrofa GN...    31   2.9  
sp|Q3SL58|HISZ_THIDA ATP phosphoribosyltransferase regulatory su...    31   2.9  
sp|P32768|FLO1_YEAST Flocculation protein FLO1 OS=Saccharomyces ...    31   3.7  
sp|P39712|FLO9_YEAST Flocculation protein FLO9 OS=Saccharomyces ...    30   4.9  
sp|Q924I3|CCRL1_MOUSE C-C chemokine receptor type 11 OS=Mus musc...    30   4.9  
sp|Q08903|YO379_YEAST Putative uncharacterized protein YOR379C O...    30   6.4  
sp|P47394|Y148_MYCGE Uncharacterized protein MG148 OS=Mycoplasma...    30   6.4  
sp|P40870|SP5AE_BACSU Stage V sporulation protein AE OS=Bacillus...    30   6.4  
sp|Q86W92|LIPB1_HUMAN Liprin-beta-1 OS=Homo sapiens GN=PPFIBP1 P...    30   6.4  
sp|Q9HCM3|K1549_HUMAN UPF0606 protein KIAA1549 OS=Homo sapiens G...    30   6.4  

>sp|Q01589|SED1_YEAST Cell wall protein SED1 OS=Saccharomyces
           cerevisiae GN=SED1 PE=1 SV=1
          Length = 338

 Score = 33.1 bits (74), Expect = 0.75
 Identities = 17/47 (36%), Positives = 30/47 (63%)
 Frame = +3

Query: 108 GISLLEQSASPTPVVPSHVGISLTASTEFTIIASLGASVVVPVTSGM 248
           G++  + +A+P+  V + V +S +AS+   +I S GA+VVVP   G+
Sbjct: 284 GVTTKQTTANPSLTVSTVVPVSSSASSHSVVINSNGANVVVPGALGL 330


>sp|P36745|VL2_HPV07 Minor capsid protein L2 OS=Human papillomavirus
           type 7 GN=L2 PE=3 SV=1
          Length = 456

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 19/50 (38%), Positives = 31/50 (62%), Gaps = 6/50 (12%)
 Frame = +3

Query: 111 ISLLE-----QSASPTPVVPSHVGISLTAS-TEFTIIASLGASVVVPVTS 242
           +SL+E     QS +P+PV+P+  G S+T+S T+   I  + ++  V VTS
Sbjct: 109 VSLIEESSIIQSGAPSPVIPTEGGFSITSSGTDVPAILDISSTNTVHVTS 158


>sp|P38894|FLO5_YEAST Flocculation protein FLO5 OS=Saccharomyces
            cerevisiae GN=FLO5 PE=2 SV=1
          Length = 1075

 Score = 31.6 bits (70), Expect = 2.2
 Identities = 25/73 (34%), Positives = 41/73 (56%)
 Frame = +3

Query: 54   SILLSLNSTFLTVSLANIGISLLEQSASPTPVVPSHVGISLTASTEFTIIASLGASVVVP 233
            S ++S++ T  T+SL + G+S + Q    TP   S VG S TAS E +  A    S++  
Sbjct: 1003 SSVVSVSETGNTMSLTSSGLSTMSQQPRSTP-ASSMVG-SSTASLEISTYAGSANSLL-- 1058

Query: 234  VTSGMTSFLTAVL 272
              SG++ F+ ++L
Sbjct: 1059 AGSGLSVFIASLL 1071


>sp|Q28938|IL12B_PIG Interleukin-12 subunit beta OS=Sus scrofa
           GN=IL12B PE=2 SV=1
          Length = 324

 Score = 31.2 bits (69), Expect = 2.9
 Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 7/59 (11%)
 Frame = +2

Query: 107 RNLSIGTIGQSNTSGPFTCW-------NLVNSIYRIHHHRLPRGLCCGTSNIWHDIFPY 262
           +N S       N SG FTCW       +L  S+        PRG+ CGT+ +  D+  Y
Sbjct: 124 KNKSFLKCEAKNYSGRFTCWWLTAISTDLKFSVKSSRGSTDPRGVTCGTATLSEDLGEY 182


>sp|Q3SL58|HISZ_THIDA ATP phosphoribosyltransferase regulatory
           subunit OS=Thiobacillus denitrificans (strain ATCC
           25259) GN=hisZ PE=3 SV=1
          Length = 321

 Score = 31.2 bits (69), Expect = 2.9
 Identities = 20/59 (33%), Positives = 32/59 (54%)
 Frame = -2

Query: 398 RQVMAYAKALELVGIPHIPSERAITAEMVIRDEALGG*EI*FQNCCKERCHARCYWYHN 222
           R+V+A A+A     +PH+P+  A    +V  D+ALGG E+ +     +    R Y YH+
Sbjct: 220 REVLAEARAR----LPHLPAVAAALDTLVSLDQALGGVELAY-----DLAELRGYGYHS 269


>sp|P32768|FLO1_YEAST Flocculation protein FLO1 OS=Saccharomyces
            cerevisiae GN=FLO1 PE=3 SV=4
          Length = 1537

 Score = 30.8 bits (68), Expect = 3.7
 Identities = 25/73 (34%), Positives = 40/73 (54%)
 Frame = +3

Query: 54   SILLSLNSTFLTVSLANIGISLLEQSASPTPVVPSHVGISLTASTEFTIIASLGASVVVP 233
            S ++S++ T  T SL + G+S + Q    TP   S VG S TAS E +  A    S++  
Sbjct: 1465 SSVVSVSETGNTKSLTSSGLSTMSQQPRSTP-ASSMVGYS-TASLEISTYAGSANSLL-- 1520

Query: 234  VTSGMTSFLTAVL 272
              SG++ F+ ++L
Sbjct: 1521 AGSGLSVFIASLL 1533


>sp|P39712|FLO9_YEAST Flocculation protein FLO9 OS=Saccharomyces
            cerevisiae GN=FLO9 PE=3 SV=2
          Length = 1322

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 25/73 (34%), Positives = 40/73 (54%)
 Frame = +3

Query: 54   SILLSLNSTFLTVSLANIGISLLEQSASPTPVVPSHVGISLTASTEFTIIASLGASVVVP 233
            S ++S++ T  T SL + G+S + Q    TP   S VG S TAS E +  A    S++  
Sbjct: 1250 SSVVSVSETGNTKSLTSSGLSTMSQQPRSTP-ASSMVG-SSTASLEISTYAGSANSLL-- 1305

Query: 234  VTSGMTSFLTAVL 272
              SG++ F+ ++L
Sbjct: 1306 AGSGLSVFIASLL 1318


>sp|Q924I3|CCRL1_MOUSE C-C chemokine receptor type 11 OS=Mus
           musculus GN=Ccrl1 PE=1 SV=1
          Length = 350

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 16/50 (32%), Positives = 27/50 (54%)
 Frame = +3

Query: 84  LTVSLANIGISLLEQSASPTPVVPSHVGISLTASTEFTIIASLGASVVVP 233
           + +S+  +    + Q+A  TP+ P H+G SL AS +   +  +G   VVP
Sbjct: 166 ILLSIPQLVFYTVNQNARCTPIFPHHLGTSLKASIQ---MLEIGIGFVVP 212


>sp|Q08903|YO379_YEAST Putative uncharacterized protein YOR379C
           OS=Saccharomyces cerevisiae GN=YOR379C PE=5 SV=1
          Length = 112

 Score = 30.0 bits (66), Expect = 6.4
 Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
 Frame = +2

Query: 113 LSIGTIGQSNTSGPFTCW-NLVNSIYRIHHHRLPRGLCCGTSNIWHDIFPYSSSGIKFLI 289
           +S   +G S     F C  N     YRI +HR+ +  C     +WH +  +  SG K  +
Sbjct: 45  ISFQRLGTSVIYSRFNCTCNTQTYRYRIVYHRINQRGCKTLMFVWHRVTKHYCSGRKGHV 104

Query: 290 HLVLHH 307
           H   H+
Sbjct: 105 HSPRHN 110


>sp|P47394|Y148_MYCGE Uncharacterized protein MG148 OS=Mycoplasma
           genitalium GN=MG148 PE=4 SV=1
          Length = 409

 Score = 30.0 bits (66), Expect = 6.4
 Identities = 14/35 (40%), Positives = 22/35 (62%)
 Frame = -3

Query: 115 EIPMLANDTVRKVEFSDSRMESKTTQHLDKIGQDA 11
           +IP L+     K EF+DS+ +SK   H+ K+ +DA
Sbjct: 226 KIPFLSICCEMKSEFNDSKHKSKNKDHISKLVRDA 260
tr_hit_id Q6CXN2
Definition tr|Q6CXN2|Q6CXN2_KLULA KLLA0A06930p OS=Kluyveromyces lactis
Align length 49
Score (bit) 31.2
E-value 0.35
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919493|Adiantum capillus-veneris mRNA, clone:
YMU001_000125_F12.
         (504 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q6CXN2|Q6CXN2_KLULA KLLA0A06930p OS=Kluyveromyces lactis GN=K...    31   0.35 
tr|Q6CXN3|Q6CXN3_KLULA KLLA0A06886p OS=Kluyveromyces lactis GN=K...    31   0.75 
tr|A6RPY5|A6RPY5_BOTFB Putative uncharacterized protein OS=Botry...    36   0.90 
tr|Q54YP3|Q54YP3_DICDI Putative uncharacterized protein OS=Dicty...    35   2.0  
tr|Q3D424|Q3D424_STRAG Cell wall surface anchor family protein O...    35   2.6  
tr|B5I1F2|B5I1F2_9ACTO Truncated magnesium or manganese-dependen...    35   2.6  
tr|B6MMH0|B6MMH0_BRAFL Putative uncharacterized protein OS=Branc...    34   4.5  
tr|B4KJB9|B4KJB9_DROMO GI17708 OS=Drosophila mojavensis GN=GI177...    33   5.8  
tr|Q0CPJ4|Q0CPJ4_ASPTN Endoglucanase 3 OS=Aspergillus terreus (s...    33   5.8  
tr|Q8B5X2|Q8B5X2_HPV54 Putative minor capsid protein L2 OS=Human...    33   7.6  
tr|Q8J275|Q8J275_YEAST Cell wall protein OS=Saccharomyces cerevi...    33   7.6  
tr|Q8J274|Q8J274_YEAST Cell wall protein OS=Saccharomyces cerevi...    33   7.6  
tr|Q8J273|Q8J273_YEAST Cell wall protein OS=Saccharomyces cerevi...    33   7.6  
tr|Q8J272|Q8J272_YEAST Cell wall protein OS=Saccharomyces cerevi...    33   7.6  
tr|Q8J271|Q8J271_YEAST Cell wall protein OS=Saccharomyces cerevi...    33   7.6  
tr|Q8J270|Q8J270_YEAST Cell wall protein OS=Saccharomyces cerevi...    33   7.6  
tr|Q8J057|Q8J057_YEAST Cell wall protein OS=Saccharomyces cerevi...    33   7.6  
tr|B5VFX3|B5VFX3_YEAS6 YDR077Wp-like protein OS=Saccharomyces ce...    33   7.6  
tr|B3LGJ3|B3LGJ3_YEAS1 Cell surface glycoprotein OS=Saccharomyce...    33   7.6  
tr|A6ZY42|A6ZY42_YEAS7 Conserved protein OS=Saccharomyces cerevi...    33   7.6  
tr|Q6I7U6|Q6I7U6_9SAUR Cytochrome c oxidase subunit 1 OS=Shinisa...    33   9.9  
tr|Q8E473|Q8E473_STRA3 Putative uncharacterized protein gbs1529 ...    33   9.9  
tr|Q3DKL3|Q3DKL3_STRAG Cell wall surface anchor family protein (...    33   9.9  
tr|A4RXV7|A4RXV7_OSTLU Predicted protein OS=Ostreococcus lucimar...    33   9.9  
tr|B4MD01|B4MD01_DROVI GJ15230 OS=Drosophila virilis GN=GJ15230 ...    33   9.9  
tr|Q469Y3|Q469Y3_METBF Response regulator receiver OS=Methanosar...    33   9.9  

>tr|Q6CXN2|Q6CXN2_KLULA KLLA0A06930p OS=Kluyveromyces lactis
           GN=KLLA0A06930g PE=4 SV=1
          Length = 587

 Score = 31.2 bits (69), Expect(2) = 0.35
 Identities = 19/49 (38%), Positives = 26/49 (53%)
 Frame = +1

Query: 343 GICGMPTSSNALA*AITCLSFASSALFGVHNSPCEKGIIGLLNDGSLPK 489
           GI G+P+  N +   I  LS  + A+FG     C + +  L N GSLPK
Sbjct: 355 GIKGLPSVINVVI-LIAVLSVGNCAVFG-----CSRSMAALANQGSLPK 397



 Score = 25.4 bits (54), Expect(2) = 0.35
 Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 4/60 (6%)
 Frame = +3

Query: 75  STFLTVSLANIGISLL----EQSASPTPVVPSHVGISLTASTEFTIIASLGASVVVPVTS 242
           S F+T + +  G  L+     ++A+P   +PS         T F I+A L   ++VP TS
Sbjct: 272 SVFVTAAFSFAGSELVGLAAAETANPRKSIPSAAKQVFWRITLFYILALLMVGLLVPYTS 331


>tr|Q6CXN3|Q6CXN3_KLULA KLLA0A06886p OS=Kluyveromyces lactis
           GN=KLLA0A06886g PE=4 SV=1
          Length = 587

 Score = 30.8 bits (68), Expect(2) = 0.75
 Identities = 19/49 (38%), Positives = 26/49 (53%)
 Frame = +1

Query: 343 GICGMPTSSNALA*AITCLSFASSALFGVHNSPCEKGIIGLLNDGSLPK 489
           GI G+P+  N +   I  LS  +SA+F      C + +  L N GSLPK
Sbjct: 355 GIKGLPSVINVVI-LIAVLSVGNSAVFA-----CSRSMAALANQGSLPK 397



 Score = 24.6 bits (52), Expect(2) = 0.75
 Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 4/60 (6%)
 Frame = +3

Query: 75  STFLTVSLANIGISLL----EQSASPTPVVPSHVGISLTASTEFTIIASLGASVVVPVTS 242
           S F+T + +  G  L+     ++A+P   +PS         T F I+A L   ++VP TS
Sbjct: 272 SVFVTAAFSFAGSELVGLAAAETANPRKSLPSAAKQVFWRITLFYILALLMVGLLVPYTS 331


>tr|A6RPY5|A6RPY5_BOTFB Putative uncharacterized protein
           OS=Botryotinia fuckeliana (strain B05.10) GN=BC1G_02508
           PE=4 SV=1
          Length = 688

 Score = 36.2 bits (82), Expect = 0.90
 Identities = 20/84 (23%), Positives = 43/84 (51%)
 Frame = -3

Query: 289 DEKFDSRTAVRKDVMPDVTGTTTEAPREAMMVNSVDAVNEIPTCEGTTGVGLADCSNREI 110
           DEK  +++ V K + PD     T A  E++    +   +++ T + TT   +A  S  E+
Sbjct: 298 DEKIVAKSGVPKRLRPDDENEGTAARSESLKKRRIAKASKVATEKATTPKPVAKLSKEEL 357

Query: 109 PMLANDTVRKVEFSDSRMESKTTQ 38
               +D++RK  +  S++ + +++
Sbjct: 358 EKARSDSLRKRRYLASKVRNDSSR 381


>tr|Q54YP3|Q54YP3_DICDI Putative uncharacterized protein
           OS=Dictyostelium discoideum GN=DDB_0204455 PE=4 SV=1
          Length = 1701

 Score = 35.0 bits (79), Expect = 2.0
 Identities = 23/59 (38%), Positives = 31/59 (52%)
 Frame = -3

Query: 211 REAMMVNSVDAVNEIPTCEGTTGVGLADCSNREIPMLANDTVRKVEFSDSRMESKTTQH 35
           +E M V+SVD  N +      TGVGL   + REI    +D VR V+    RM++K   H
Sbjct: 822 QEEMFVDSVDIPNVMKRFNQLTGVGLTSRALREI--TKHDGVRLVQSDVKRMKAKVKAH 878


>tr|Q3D424|Q3D424_STRAG Cell wall surface anchor family protein
           OS=Streptococcus agalactiae H36B GN=sdrE PE=4 SV=1
          Length = 1326

 Score = 34.7 bits (78), Expect = 2.6
 Identities = 19/65 (29%), Positives = 36/65 (55%)
 Frame = +3

Query: 99  ANIGISLLEQSASPTPVVPSHVGISLTASTEFTIIASLGASVVVPVTSGMTSFLTAVLES 278
           AN  I LL +SAS +    +    S++AST  +  AS+ AS     ++ M++ ++A   +
Sbjct: 634 ANAEIKLLSESASTSASTSASTSASMSASTSASTSASMSASTSASTSASMSASMSASTSA 693

Query: 279 NFSST 293
           + S++
Sbjct: 694 SMSAS 698


>tr|B5I1F2|B5I1F2_9ACTO Truncated magnesium or manganese-dependent
           protein phosphatase OS=Streptomyces sviceus ATCC 29083
           GN=SSEG_05487 PE=4 SV=1
          Length = 624

 Score = 34.7 bits (78), Expect = 2.6
 Identities = 15/47 (31%), Positives = 23/47 (48%)
 Frame = +2

Query: 179 SIYRIHHHRLPRGLCCGTSNIWHDIFPYSSSGIKFLIHLVLHHG*PS 319
           ++  + H  LP G   G    W D+ P S S +  ++  V+ HG PS
Sbjct: 431 AVVEVAHRYLPCGSLAGIGGDWFDVIPLSGSRVALVVGDVVGHGIPS 477


>tr|B6MMH0|B6MMH0_BRAFL Putative uncharacterized protein
            OS=Branchiostoma floridae GN=BRAFLDRAFT_84276 PE=4 SV=1
          Length = 1721

 Score = 33.9 bits (76), Expect = 4.5
 Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
 Frame = -3

Query: 289  DEKFDSRTAVRKDVMPDVTGTTTEAPREAMMVNSVDAVNEIPTCEGTTGVGLADCSNREI 110
            ++KF    A +++V+PD++ + T + R A  V S D           TG+G A   + E+
Sbjct: 778  EDKFGELEASKENVLPDISDSDTSSVRSADTVISKD-----------TGIGTATAISEEV 826

Query: 109  --PMLANDTV--RKVEFSDSRMESKTTQ 38
              P L+N  V   K  F+D   E+ T +
Sbjct: 827  TLPSLSNIKVFRPKDHFADGTDETSTEE 854


>tr|B4KJB9|B4KJB9_DROMO GI17708 OS=Drosophila mojavensis GN=GI17708
           PE=4 SV=1
          Length = 1060

 Score = 33.5 bits (75), Expect = 5.8
 Identities = 19/58 (32%), Positives = 32/58 (55%)
 Frame = +3

Query: 120 LEQSASPTPVVPSHVGISLTASTEFTIIASLGASVVVPVTSGMTSFLTAVLESNFSST 293
           L  + +PTP   S VG+ L A    T+ AS  AS++ P ++ M ++L A  +++   T
Sbjct: 55  LTPAPTPTPTAASPVGLPLAA----TLAASAAASLLPPQSAAMAAYLAAAQQNHLLLT 108


>tr|Q0CPJ4|Q0CPJ4_ASPTN Endoglucanase 3 OS=Aspergillus terreus
           (strain NIH 2624) GN=ATEG_04390 PE=4 SV=1
          Length = 455

 Score = 33.5 bits (75), Expect = 5.8
 Identities = 20/72 (27%), Positives = 34/72 (47%)
 Frame = +3

Query: 66  SLNSTFLTVSLANIGISLLEQSASPTPVVPSHVGISLTASTEFTIIASLGASVVVPVTSG 245
           S +S   + S +++ ++  E S++P P  P       TAS+  T   +   SV+  VTS 
Sbjct: 345 STSSAAASTSASSVSVTSAEASSAPAPTAPVSTAPVSTASSATTPTTTQATSVITSVTSL 404

Query: 246 MTSFLTAVLESN 281
           +  F +    SN
Sbjct: 405 LPIFTSPPSTSN 416


>tr|Q8B5X2|Q8B5X2_HPV54 Putative minor capsid protein L2 OS=Human
           papillomavirus type 54 GN=L2 PE=4 SV=1
          Length = 470

 Score = 33.1 bits (74), Expect = 7.6
 Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 5/53 (9%)
 Frame = +3

Query: 111 ISLLEQSA-----SPTPVVPSHVGISLTASTEFTIIASLGASVVVPVTSGMTS 254
           +SL+E+S+     +PTP +P+H G  +T S++ T       S   P+   +TS
Sbjct: 104 VSLVEESSVVDVGAPTPTIPTHGGFEITTSSDATPAILDVTSTTTPIRVSVTS 156