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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP919499
Clone id YMU001_000125_G06
Library
Length 493
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000125_G06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
TGGAACCCTTCCTGGCATATAATCCGCATCAGTCATACATTTTTTATGTTGCCTGTCAGC
CCATGATCTTCCTAGCTGCTCCACCCTTTTGCCATGCTTCTACTAGCTTGCACGTATCTG
CCTCTGCCATCTTCTATGGTCGACACACTTTGGCTGTACCATCATTGCCCACCCCCTAGT
TGAGCAATTATGCTCAACCCCATAAAAGCTTTATTCCACTTCTAACTGCAAAACCTAGCA
CACACTATGAGAAAACCAGAACCATATGTACACAGTTTTATTCTCCCTACTGTCAAATCT
TCAAGTGGGTTGCCCCACCCCCTGCATCATATAGCTTCCACCTGGATCAAACACCTGCCT
TTGATATCTTTCACCTATGTGTAACTGCTCACCATAGTGTTGTACCACAACACCTAGATC
ACCATGTGTGTAGGTTGGCCCTAGCCTACCTGACACCAAGCTCCAACACATGTCTGAACC
TCCCTCCCAACCA
■■Homology search results ■■ -
sp_hit_id P34913
Definition sp|P34913|HYES_HUMAN Epoxide hydrolase 2 OS=Homo sapiens
Align length 58
Score (bit) 32.0
E-value 1.6
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919499|Adiantum capillus-veneris mRNA, clone:
YMU001_000125_G06.
         (493 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P34913|HYES_HUMAN Epoxide hydrolase 2 OS=Homo sapiens GN=EPHX...    32   1.6  
sp|Q66PG3|LARGE_CHICK Glycosyltransferase-like protein LARGE1 OS...    31   3.5  
sp|O24600|RPOT3_ARATH DNA-directed RNA polymerase 3, chloroplast...    30   5.9  
sp|Q867Z4|LOLA4_DROME Longitudinals lacking protein, isoforms F/...    30   5.9  
sp|Q38913|EXTN1_ARATH Extensin-1 OS=Arabidopsis thaliana GN=EXT1...    30   7.8  

>sp|P34913|HYES_HUMAN Epoxide hydrolase 2 OS=Homo sapiens GN=EPHX2
           PE=1 SV=2
          Length = 555

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 16/58 (27%), Positives = 31/58 (53%)
 Frame = +1

Query: 130 SSMVDTLWLYHHCPPPS*AIMLNPIKALFHF*LQNLAHTMRKPEPYVHSFILPTVKSS 303
           ++++   WL         A ++  +K  F F +++    M KPEP ++ F+L T+K+S
Sbjct: 119 TAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQVGMVKPEPQIYKFLLDTLKAS 176


>sp|Q66PG3|LARGE_CHICK Glycosyltransferase-like protein LARGE1
           OS=Gallus gallus GN=LARGE PE=2 SV=1
          Length = 756

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 16/58 (27%), Positives = 25/58 (43%), Gaps = 8/58 (13%)
 Frame = +3

Query: 321 PASYSFHLDQTPAFDI--------FHLCVTAHHSVVPQHLDHHVCRLALAYLTPSSNT 470
           P +Y  H+   P+FDI        + +C+        Q +  H    AL YLT  +N+
Sbjct: 699 PNAYMIHMPHAPSFDITKFRSNKQYRICLKTLKEEFQQDMSRHYGFAALKYLTAENNS 756


>sp|O24600|RPOT3_ARATH DNA-directed RNA polymerase 3, chloroplastic
           OS=Arabidopsis thaliana GN=RPOT3 PE=2 SV=1
          Length = 993

 Score = 30.0 bits (66), Expect = 5.9
 Identities = 16/61 (26%), Positives = 28/61 (45%)
 Frame = +3

Query: 216 PLLTAKPSTHYEKTRTICTQFYSPYCQIFKWVAPPPASYSFHLDQTPAFDIFHLCVTAHH 395
           P L+  P++H++   ++ T           W+ PPP+S  F     P F+   L ++A  
Sbjct: 9   PSLSLNPTSHFQHQTSLVT-----------WLKPPPSSALFRRKTLPFFERHSLPISASS 57

Query: 396 S 398
           S
Sbjct: 58  S 58


>sp|Q867Z4|LOLA4_DROME Longitudinals lacking protein, isoforms
           F/I/K/T OS=Drosophila melanogaster GN=lola PE=1 SV=1
          Length = 970

 Score = 30.0 bits (66), Expect = 5.9
 Identities = 22/85 (25%), Positives = 35/85 (41%), Gaps = 8/85 (9%)
 Frame = +3

Query: 195 QPHKSFIPLLTAKPSTHYEKTRTICTQFYSPY------CQIF--KWVAPPPASYSFHLDQ 350
           QP  +   LL A  ++H E   T+ T   +P       C++   K + P   + + H   
Sbjct: 530 QPTPTITELLNAAAASHSEPKPTLTTLTSTPIKLPSSECELINIKKIIPATTTIATHHPH 589

Query: 351 TPAFDIFHLCVTAHHSVVPQHLDHH 425
           T +  I    +  H S  P H +HH
Sbjct: 590 TSSTIIHPHHIIQHVSQEPHHQEHH 614


>sp|Q38913|EXTN1_ARATH Extensin-1 OS=Arabidopsis thaliana GN=EXT1
           PE=2 SV=2
          Length = 373

 Score = 29.6 bits (65), Expect = 7.8
 Identities = 27/116 (23%), Positives = 43/116 (37%), Gaps = 7/116 (6%)
 Frame = +3

Query: 6   PFLAYNPHQSYIFYVACQPMIFLAAPPFCHASTS--LHVSASAIFYGRHTLAVPSLPTP* 179
           P + Y+P    + Y +  P +  + PP  + S    +H S   + Y      V   P P 
Sbjct: 260 PPVHYSPPP--VVYHSPPPPVHYSPPPVVYHSPPPPVHYSPPPVVYHSPPPPVHYSPPPV 317

Query: 180 LSNYAQPHKSFIPLLTAKPSTHYEKTRTICT-----QFYSPYCQIFKWVAPPPASY 332
           + +   P K      +  P  HY       +       YSP  Q + + +PPP  Y
Sbjct: 318 VYHSPPPPKKHYEYKSPPPPVHYSPPTVYHSPPPPVHHYSPPHQPYLYKSPPPPHY 373
tr_hit_id Q4SW87
Definition tr|Q4SW87|Q4SW87_TETNG Chromosome undetermined SCAF13668, whole genome shotgun sequence. (Fragment) OS=Tetraodon nigroviridis
Align length 115
Score (bit) 35.4
E-value 1.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919499|Adiantum capillus-veneris mRNA, clone:
YMU001_000125_G06.
         (493 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q4SW87|Q4SW87_TETNG Chromosome undetermined SCAF13668, whole ...    35   1.4  
tr|A7S2X6|A7S2X6_NEMVE Predicted protein (Fragment) OS=Nematoste...    34   4.2  
tr|Q73TW1|Q73TW1_MYCPA Putative uncharacterized protein OS=Mycob...    33   5.5  
tr|A0QMJ4|A0QMJ4_MYCA1 Mce-family protein mce1d OS=Mycobacterium...    33   5.5  
tr|B4I261|B4I261_DROSE GM18689 OS=Drosophila sechellia GN=GM1868...    33   5.5  
tr|Q090U6|Q090U6_STIAU Protein kinase OS=Stigmatella aurantiaca ...    33   9.3  

>tr|Q4SW87|Q4SW87_TETNG Chromosome undetermined SCAF13668, whole
           genome shotgun sequence. (Fragment) OS=Tetraodon
           nigroviridis GN=GSTENG00011611001 PE=4 SV=1
          Length = 677

 Score = 35.4 bits (80), Expect = 1.4
 Identities = 33/115 (28%), Positives = 48/115 (41%), Gaps = 11/115 (9%)
 Frame = +3

Query: 87  FCHASTSLHVSASAIFYGRHTLAVPSLPTP*LSNYAQP-----HKSFIPLLTAKPSTHY- 248
           F H ST L V  S +F+ R   + PS+P P +S+  QP      ++  PL T  P+    
Sbjct: 536 FRHLSTFLLVKHSPLFFSRAAQSPPSMPWPTMSSVFQPLAACTERAMFPLQTTPPTPQLW 595

Query: 249 ---EKTRTICTQFY--SPYCQIFKWVAPPPASYSFHLDQTPAFDIFHLCVTAHHS 398
               + + +  Q    +P     K    PP+SY   L  T    I H C  A  +
Sbjct: 596 LPCRRMQRLQLQRMEDTPPTPCHKPSRQPPSSY---LSTTSTRRIDHACSEAQRA 647


>tr|A7S2X6|A7S2X6_NEMVE Predicted protein (Fragment) OS=Nematostella
           vectensis GN=v1g102284 PE=4 SV=1
          Length = 404

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 31/121 (25%), Positives = 46/121 (38%)
 Frame = +3

Query: 9   FLAYNPHQSYIFYVACQPMIFLAAPPFCHASTSLHVSASAIFYGRHTLAVPSLPTP*LSN 188
           F+ Y P ++  FY A     F    PF          AS ++Y       P    P   N
Sbjct: 28  FVYYAPFRASFFYYAPLRASFFYYAPF---------RASFVYYA------PFCELPSFIN 72

Query: 189 YAQPHKSFIPLLTAKPSTHYEKTRTICTQFYSPYCQIFKWVAPPPASYSFHLDQTPAFDI 368
           YA    SFI     + S  Y         +Y+P+   F + AP  AS+ ++     +FD 
Sbjct: 73  YAPFRASFIYYAPFRASFVYYAPFRASFFYYAPFRASFVYYAPFRASFFYYAPFRASFDY 132

Query: 369 F 371
           +
Sbjct: 133 Y 133


>tr|Q73TW1|Q73TW1_MYCPA Putative uncharacterized protein
           OS=Mycobacterium paratuberculosis GN=MAP_3607 PE=4 SV=1
          Length = 537

 Score = 33.5 bits (75), Expect = 5.5
 Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 8/91 (8%)
 Frame = +3

Query: 72  LAAPPFCHASTSLHVSASA------IFYGRH--TLAVPSLPTP*LSNYAQPHKSFIPLLT 227
           L   P     T+LHV  +A      I++  H   +A+PS+     +N+A P +     + 
Sbjct: 291 LQPDPLNGLETALHVLPTAAANINQIYHPSHGSVVAIPSI-----TNFANPMQFICSAIQ 345

Query: 228 AKPSTHYEKTRTICTQFYSPYCQIFKWVAPP 320
           A     Y+++  +C Q+ +P     K+  PP
Sbjct: 346 AGSRLGYQESAELCAQYLAPILDAIKFNYPP 376


>tr|A0QMJ4|A0QMJ4_MYCA1 Mce-family protein mce1d OS=Mycobacterium
           avium (strain 104) GN=MAV_5012 PE=4 SV=1
          Length = 537

 Score = 33.5 bits (75), Expect = 5.5
 Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 8/91 (8%)
 Frame = +3

Query: 72  LAAPPFCHASTSLHVSASA------IFYGRH--TLAVPSLPTP*LSNYAQPHKSFIPLLT 227
           L   P     T+LHV  +A      I++  H   +A+PS+     +N+A P +     + 
Sbjct: 291 LQPDPLNGLETALHVLPTAAANINQIYHPSHGSVVAIPSI-----TNFANPMQFICSAIQ 345

Query: 228 AKPSTHYEKTRTICTQFYSPYCQIFKWVAPP 320
           A     Y+++  +C Q+ +P     K+  PP
Sbjct: 346 AGSRLGYQESAELCAQYLAPILDAIKFNYPP 376


>tr|B4I261|B4I261_DROSE GM18689 OS=Drosophila sechellia GN=GM18689
           PE=4 SV=1
          Length = 678

 Score = 33.5 bits (75), Expect = 5.5
 Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 6/67 (8%)
 Frame = +3

Query: 150 LAVPSLPTP*LSNYAQPH-KSFIPLLTAKPSTHY---EKTRTICTQFYS--PYCQIFKWV 311
           L  PS P+   S+Y  P   SF+PL +A PST+Y    KT+++ +  YS  P       V
Sbjct: 209 LPPPSRPSKPSSSYGAPSVSSFVPLPSA-PSTNYGAPSKTQSLGSSGYSSGPSSSYEAPV 267

Query: 312 APPPASY 332
           APP +SY
Sbjct: 268 APPSSSY 274


>tr|Q090U6|Q090U6_STIAU Protein kinase OS=Stigmatella aurantiaca
           DW4/3-1 GN=STIAU_3835 PE=4 SV=1
          Length = 473

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
 Frame = +3

Query: 273 QFYSPYCQIFKWVAP--PPASYSFHLDQTPAFDIFHLCVTAHHSVVPQH 413
           Q+ SP CQ F+W A   P A Y    +  PA D++ L VTA+  VV ++
Sbjct: 179 QYQSPECQRFQWEARHLPRARY----EAQPADDVYALGVTAYRLVVGKY 223