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BP919501
Clone id YMU001_000125_G09
Library
Length 545
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000125_G09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
CTTCAAAGCCTCAGCATCCACTTCCAAACCCTCTTGACGAGCAATTATCTGCAGCCTATT
CACAACATCATTCTCCTTGATCTTCGAAAAAATGAATTTCTGACATCTCGAGATAACTGC
ATGAGGCAACTGCTCCAAGCTGCTAGTGCACAACACAAAGACAACATTTTTGGGAGCTTC
TTCCACAGCTTTCATGAACGCATTCCAAGAATGAGTTGAAAGAATATGACATTCATCCAC
AATAAACACTCTATAACGGAAGGAGACAGCTCTTGTCACTTCATGAATCATCTTTTTCAT
GCCTTTTGTACTCTGAAGCCCACCTGCTGTGAATTCTTTCAAAATAGAGGTTTTCCCAAA
CTTATGTGCTAAGCATTCTGAGCACGACCCACATGGCTTCAGTTTGTCAGCTGATGTACA
GTTCAATGCTATTGCAAAAATCCTGGCACAAGAGGTTTTCCCTGTACCTTGAGGGCCATG
AAAGATGTATAGAGATGCAATCCTTCCCTTCAAAAGGGCATTGGAGAGGACTTGTGTAAT
CAGGC
■■Homology search results ■■ -
sp_hit_id P09122
Definition sp|P09122|DPO3X_BACSU DNA polymerase III subunit gamma/tau OS=Bacillus subtilis
Align length 183
Score (bit) 132.0
E-value 1.0e-30
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919501|Adiantum capillus-veneris mRNA, clone:
YMU001_000125_G09.
         (545 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P09122|DPO3X_BACSU DNA polymerase III subunit gamma/tau OS=Ba...   132   1e-30
sp|P47658|DPO3X_MYCGE DNA polymerase III subunit gamma/tau OS=My...   129   9e-30
sp|Q89A95|DPO3X_BUCBP DNA polymerase III subunit gamma OS=Buchne...   124   3e-28
sp|P43746|DPO3X_HAEIN DNA polymerase III subunit gamma/tau OS=Ha...   120   4e-27
sp|P06710|DPO3X_ECOLI DNA polymerase III subunit tau OS=Escheric...   116   8e-26
sp|P74876|DPO3X_SALTY DNA polymerase III subunit tau OS=Salmonel...   115   1e-25
sp|Q8K983|DPO3X_BUCAP DNA polymerase III subunit gamma OS=Buchne...   113   5e-25
sp|P57553|DPO3X_BUCAI DNA polymerase III subunit gamma OS=Buchne...   112   9e-25
sp|P63975|DPO3X_MYCTU DNA polymerase III subunit gamma/tau OS=My...   111   3e-24
sp|P63976|DPO3X_MYCBO DNA polymerase III subunit gamma/tau OS=My...   111   3e-24
sp|P75177|DPO3X_MYCPN DNA polymerase III subunit gamma/tau OS=My...   110   4e-24
sp|P37540|HOLB_BACSU DNA polymerase III subunit delta' OS=Bacill...    71   4e-12
sp|A3DNV9|RFCS_STAMF Replication factor C small subunit OS=Staph...    64   5e-10
sp|O74111|RFC3_ARXAD Replication factor C subunit 3 OS=Arxula ad...    60   5e-09
sp|A1RSA2|RFCS1_PYRIL Replication factor C small subunit 1 OS=Py...    56   1e-07
sp|Q54MD4|RFC4_DICDI Probable replication factor C subunit 4 OS=...    56   1e-07
sp|Q9UXF5|RFCS_SULSO Replication factor C small subunit OS=Sulfo...    55   2e-07
sp|Q5UZE5|RFCS_HALMA Replication factor C small subunit OS=Haloa...    55   2e-07
sp|Q8ZYK4|RFCS1_PYRAE Replication factor C small subunit 1 OS=Py...    55   3e-07
sp|P53016|RFC4_CAEEL Replication factor C subunit 4 OS=Caenorhab...    55   3e-07
sp|Q2NH89|RFCS_METST Replication factor C small subunit OS=Metha...    54   4e-07
sp|P40348|RFC2_YEAST Replication factor C subunit 2 OS=Saccharom...    54   4e-07
sp|A3MS28|RFCS_PYRCJ Replication factor C small subunit OS=Pyrob...    54   5e-07
sp|A4WGV2|RFCS1_PYRAR Replication factor C small subunit 1 OS=Py...    54   5e-07
sp|P34429|RFC5_CAEEL Probable replication factor C subunit 5 OS=...    53   8e-07
sp|Q9YBS7|RFCS_AERPE Replication factor C small subunit OS=Aerop...    52   2e-06
sp|O57852|RFCS_PYRHO Replication factor C small subunit OS=Pyroc...    52   2e-06
sp|Q8U4J3|RFCS_PYRFU Replication factor C small subunit OS=Pyroc...    52   2e-06
sp|P38629|RFC3_YEAST Replication factor C subunit 3 OS=Saccharom...    51   3e-06
sp|Q5JHP2|RFCS_PYRKO Replication factor C small subunit OS=Pyroc...    51   4e-06

>sp|P09122|DPO3X_BACSU DNA polymerase III subunit gamma/tau
           OS=Bacillus subtilis GN=dnaX PE=3 SV=2
          Length = 563

 Score =  132 bits (332), Expect = 1e-30
 Identities = 69/183 (37%), Positives = 110/183 (60%), Gaps = 3/183 (1%)
 Frame = -3

Query: 540 ITQVLSNALLKGRIASLYIFHGPQGTGKTSCARIFAIALNCTSADKLKPCGSCSECLAHK 361
           IT+ L NALL+ + +  Y+F GP+GTGKTS A+IFA A+NC  A   +PC  C+ C    
Sbjct: 24  ITKTLQNALLQKKFSHAYLFSGPRGTGKTSAAKIFAKAVNCEHAPVDEPCNECAACKGIT 83

Query: 360 FGKTSILKEFTAG---GLQSTKGMKKMIHEVTRAVSFRYRVFIVDECHILSTHSWNAFMK 190
            G  S + E  A    G+   + ++  +     AV+  Y+V+I+DE H+LS  ++NA +K
Sbjct: 84  NGSISDVIEIDAASNNGVDEIRDIRDKVKFAPSAVT--YKVYIIDEVHMLSIGAFNALLK 141

Query: 189 AVEEAPKNVVFVLCTSSLEQLPHAVISRCQKFIFSKIKENDVVNRLQIIARQEGLEVDAE 10
            +EE P++ +F+L T+   ++P  +ISRCQ+F F +I    +V R+  I   E L+V+  
Sbjct: 142 TLEEPPEHCIFILATTEPHKIPLTIISRCQRFDFKRITSQAIVGRMNKIVDAEQLQVEEG 201

Query: 9   ALK 1
           +L+
Sbjct: 202 SLE 204


>sp|P47658|DPO3X_MYCGE DNA polymerase III subunit gamma/tau
           OS=Mycoplasma genitalium GN=dnaX PE=3 SV=3
          Length = 597

 Score =  129 bits (324), Expect = 9e-30
 Identities = 60/180 (33%), Positives = 108/180 (60%), Gaps = 1/180 (0%)
 Frame = -3

Query: 540 ITQVLSNALLKGRIASLYIFHGPQGTGKTSCARIFAIALNCTSADKLKPCGSCSECLAHK 361
           I ++L NA+ + ++ + YIF G +GTGKT+ A+I A A+NC + D++  C SC  C +  
Sbjct: 23  IRKILVNAINRDKLPNGYIFSGERGTGKTTFAKIIAKAINCLNWDQIDVCNSCDVCKSIN 82

Query: 360 FGKTSILKEFTAGGLQSTKGMKKMIHEV-TRAVSFRYRVFIVDECHILSTHSWNAFMKAV 184
                 + E  A        +++++  V     +F+ +V+I+DE H+L+T SW   +K +
Sbjct: 83  TNSAIDIVEIDAASKNGINDIRELVENVFNHPFTFKKKVYILDEAHMLTTQSWGGLLKTL 142

Query: 183 EEAPKNVVFVLCTSSLEQLPHAVISRCQKFIFSKIKENDVVNRLQIIARQEGLEVDAEAL 4
           EE+P  V+F+  T+   ++P  ++SRCQ F F KI  + ++ RL  IA++E ++++ +AL
Sbjct: 143 EESPPYVLFIFTTTEFNKIPLTILSRCQSFFFKKITSDLILERLNDIAKKEKIKIEKDAL 202


>sp|Q89A95|DPO3X_BUCBP DNA polymerase III subunit gamma OS=Buchnera
           aphidicola subsp. Baizongia pistaciae GN=dnaX PE=3 SV=1
          Length = 370

 Score =  124 bits (311), Expect = 3e-28
 Identities = 63/180 (35%), Positives = 106/180 (58%), Gaps = 1/180 (0%)
 Frame = -3

Query: 540 ITQVLSNALLKGRIASLYIFHGPQGTGKTSCARIFAIALNCTSADKLKPCGSCSECLAHK 361
           I   +SN+LL GRI   ++F G +GTGKT+ ARI A +LNC       PC  CS C+  +
Sbjct: 24  IVSAISNSLLLGRIHHAWLFFGIRGTGKTTIARILAKSLNCKLGISPNPCRKCSNCVEVE 83

Query: 360 FGKTSILKEFTAGGLQSTKGMKKMIHEVTRAVSF-RYRVFIVDECHILSTHSWNAFMKAV 184
            G    L E  A      + MK+++  +    S  R++++++DE H+LS +S+N  +K +
Sbjct: 84  QGNFIDLYEVDAASRTKVEDMKELLDNIRYLPSKGRFKIYLIDEVHMLSRYSFNFLLKNI 143

Query: 183 EEAPKNVVFVLCTSSLEQLPHAVISRCQKFIFSKIKENDVVNRLQIIARQEGLEVDAEAL 4
           EE P+++ F+L T++LE++P  ++SRC +F    I  N++V  +  I  +E +  + +AL
Sbjct: 144 EEPPQHIKFILATTNLEKIPDTILSRCLQFQLKPINLNEIVACISNILHKENITYEIKAL 203


>sp|P43746|DPO3X_HAEIN DNA polymerase III subunit gamma/tau
           OS=Haemophilus influenzae GN=dnaX PE=3 SV=1
          Length = 688

 Score =  120 bits (301), Expect = 4e-27
 Identities = 64/180 (35%), Positives = 97/180 (53%), Gaps = 1/180 (0%)
 Frame = -3

Query: 540 ITQVLSNALLKGRIASLYIFHGPQGTGKTSCARIFAIALNCTSADKLKPCGSCSECLAHK 361
           I   L+N L   R+   Y+F G +G GKTS AR+FA  LNC       PCG C  C A +
Sbjct: 24  IITALANGLKDNRLHHAYLFSGTRGVGKTSIARLFAKGLNCVHGVTATPCGECENCKAIE 83

Query: 360 FGKTSILKEFTAGGLQSTKGMKKMIHEVT-RAVSFRYRVFIVDECHILSTHSWNAFMKAV 184
            G    L E  A      +  ++++  V  + V  R++V+++DE H+LS HS+NA +K +
Sbjct: 84  QGNFIDLIEIDAASRTKVEDTRELLDNVQYKPVVGRFKVYLIDEVHMLSRHSFNALLKTL 143

Query: 183 EEAPKNVVFVLCTSSLEQLPHAVISRCQKFIFSKIKENDVVNRLQIIARQEGLEVDAEAL 4
           EE P+ V F+L T+  ++LP  ++SRC +F    + E  +   L  I  QE +  +  AL
Sbjct: 144 EEPPEYVKFLLATTDPQKLPVTILSRCLQFHLKALDETQISQHLAHILTQENIPFEDPAL 203


>sp|P06710|DPO3X_ECOLI DNA polymerase III subunit tau OS=Escherichia
           coli (strain K12) GN=dnaX PE=1 SV=1
          Length = 643

 Score =  116 bits (290), Expect = 8e-26
 Identities = 61/181 (33%), Positives = 101/181 (55%), Gaps = 1/181 (0%)
 Frame = -3

Query: 540 ITQVLSNALLKGRIASLYIFHGPQGTGKTSCARIFAIALNCTSADKLKPCGSCSECLAHK 361
           +   L+N L  GRI   Y+F G +G GKTS AR+ A  LNC +     PCG C  C   +
Sbjct: 24  VLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIE 83

Query: 360 FGKTSILKEFTAGGLQSTKGMKKMIHEVTRAVSF-RYRVFIVDECHILSTHSWNAFMKAV 184
            G+   L E  A      +  + ++  V  A +  R++V+++DE H+LS HS+NA +K +
Sbjct: 84  QGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTL 143

Query: 183 EEAPKNVVFVLCTSSLEQLPHAVISRCQKFIFSKIKENDVVNRLQIIARQEGLEVDAEAL 4
           EE P++V F+L T+  ++LP  ++SRC +F    +    + ++L+ I  +E +  +  AL
Sbjct: 144 EEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQIRHQLEHILNEEHIAHEPRAL 203

Query: 3   K 1
           +
Sbjct: 204 Q 204


>sp|P74876|DPO3X_SALTY DNA polymerase III subunit tau OS=Salmonella
           typhimurium GN=dnaX PE=3 SV=2
          Length = 642

 Score =  115 bits (288), Expect = 1e-25
 Identities = 61/181 (33%), Positives = 100/181 (55%), Gaps = 1/181 (0%)
 Frame = -3

Query: 540 ITQVLSNALLKGRIASLYIFHGPQGTGKTSCARIFAIALNCTSADKLKPCGSCSECLAHK 361
           +   L+N L  GRI   Y+F G +G GKTS AR+ A  LNC +     PCG C  C   +
Sbjct: 24  VLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIE 83

Query: 360 FGKTSILKEFTAGGLQSTKGMKKMIHEVTRAVSF-RYRVFIVDECHILSTHSWNAFMKAV 184
            G+   L E  A      +  + ++  V  A +  R++V+++DE H+LS HS+NA +K +
Sbjct: 84  QGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTL 143

Query: 183 EEAPKNVVFVLCTSSLEQLPHAVISRCQKFIFSKIKENDVVNRLQIIARQEGLEVDAEAL 4
           EE P +V F+L T+  ++LP  ++SRC +F    +    + ++L+ I  +E +  +  AL
Sbjct: 144 EEPPAHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQIRHQLEHILNEEHIAHEPRAL 203

Query: 3   K 1
           +
Sbjct: 204 Q 204


>sp|Q8K983|DPO3X_BUCAP DNA polymerase III subunit gamma OS=Buchnera
           aphidicola subsp. Schizaphis graminum GN=dnaX PE=3 SV=1
          Length = 363

 Score =  113 bits (283), Expect = 5e-25
 Identities = 59/181 (32%), Positives = 101/181 (55%), Gaps = 1/181 (0%)
 Frame = -3

Query: 540 ITQVLSNALLKGRIASLYIFHGPQGTGKTSCARIFAIALNCTSADKLKPCGSCSECLAHK 361
           I + +SN    G+I   ++  G +G GKT+ AR+ A +LNC       PC  C+ C   +
Sbjct: 24  IVKAISNGFSLGKIHHAWLLSGTRGVGKTTIARLIAKSLNCEIGITSLPCRKCTICQEIE 83

Query: 360 FGKTSILKEFTAGGLQSTKGMKKMIHEVTRAVS-FRYRVFIVDECHILSTHSWNAFMKAV 184
            G      E  A      + +++++  +    S  R++V+++DE H+LS HS+NA +K +
Sbjct: 84  KGICLDFIEIDAASRTKVEEIREILDNIYYTPSKSRFKVYLIDEVHMLSRHSFNALLKTL 143

Query: 183 EEAPKNVVFVLCTSSLEQLPHAVISRCQKFIFSKIKENDVVNRLQIIARQEGLEVDAEAL 4
           EE P+++ F+L T+ +E++P  + SRC  F  + + E D+ N L+ I ++ G   D EAL
Sbjct: 144 EEPPQHIKFILATTDVEKIPKTIRSRCLHFKLNILSEEDIFNFLKHILKKGGNNFDEEAL 203

Query: 3   K 1
           K
Sbjct: 204 K 204


>sp|P57553|DPO3X_BUCAI DNA polymerase III subunit gamma OS=Buchnera
           aphidicola subsp. Acyrthosiphon pisum GN=dnaX PE=3 SV=1
          Length = 361

 Score =  112 bits (281), Expect = 9e-25
 Identities = 59/181 (32%), Positives = 100/181 (55%), Gaps = 1/181 (0%)
 Frame = -3

Query: 540 ITQVLSNALLKGRIASLYIFHGPQGTGKTSCARIFAIALNCTSADKLKPCGSCSECLAHK 361
           I   +SN L  GRI   ++  G +G GKT+ AR+ A +LNC +     PC  C  C   +
Sbjct: 24  IVTAISNGLSLGRIHHAWLLSGTRGIGKTTIARLLAKSLNCQNGITSDPCRQCIICKEIE 83

Query: 360 FGKTSILKEFTAGGLQSTKGMKKMIHEVTRA-VSFRYRVFIVDECHILSTHSWNAFMKAV 184
            G    + E         + M++++  +  + +  R++V+++DE H+LS HS+NA +K +
Sbjct: 84  KGLCLDVIEIDGASRTKVEEMREILDSIYYSPIKSRFKVYLIDEVHMLSRHSFNALLKTL 143

Query: 183 EEAPKNVVFVLCTSSLEQLPHAVISRCQKFIFSKIKENDVVNRLQIIARQEGLEVDAEAL 4
           EE P++V FVL T+ ++++P  +ISRC  F    I E  +   L+ I  +E ++ D  +L
Sbjct: 144 EEPPEHVKFVLATTDVDRIPKTIISRCLYFKLQIISEEKIFKFLKYILIKESIDTDEYSL 203

Query: 3   K 1
           K
Sbjct: 204 K 204


>sp|P63975|DPO3X_MYCTU DNA polymerase III subunit gamma/tau
           OS=Mycobacterium tuberculosis GN=dnaX PE=3 SV=1
          Length = 578

 Score =  111 bits (277), Expect = 3e-24
 Identities = 66/180 (36%), Positives = 98/180 (54%), Gaps = 5/180 (2%)
 Frame = -3

Query: 540 ITQVLSNALLKGRIASLYIFHGPQGTGKTSCARIFAIALNCTSADKLKPCGSCSECLA-- 367
           +T  LS AL  GRI   Y+F GP+G GKTS ARI A +LNC       PCG C  C++  
Sbjct: 21  VTAPLSVALDAGRINHAYLFSGPRGCGKTSSARILARSLNCAQGPTANPCGVCESCVSLA 80

Query: 366 -HKFGKTSILKEFTA--GGLQSTKGMKKMIHEVTRAVSFRYRVFIVDECHILSTHSWNAF 196
            +  G   +++   A  GG+  T+ ++         V  RYRVFIVDE H+++T  +NA 
Sbjct: 81  PNAPGSIDVVELDAASHGGVDDTRELRDRAFYAP--VQSRYRVFIVDEAHMVTTAGFNAL 138

Query: 195 MKAVEEAPKNVVFVLCTSSLEQLPHAVISRCQKFIFSKIKENDVVNRLQIIARQEGLEVD 16
           +K VEE P++++F+  T+  E++   + SR   + F  +    +   L  I  QEG+ VD
Sbjct: 139 LKIVEEPPEHLIFIFATTEPEKVLPTIRSRTHHYPFRLLPPRTMRALLARICEQEGVVVD 198


>sp|P63976|DPO3X_MYCBO DNA polymerase III subunit gamma/tau
           OS=Mycobacterium bovis GN=dnaX PE=3 SV=1
          Length = 578

 Score =  111 bits (277), Expect = 3e-24
 Identities = 66/180 (36%), Positives = 98/180 (54%), Gaps = 5/180 (2%)
 Frame = -3

Query: 540 ITQVLSNALLKGRIASLYIFHGPQGTGKTSCARIFAIALNCTSADKLKPCGSCSECLA-- 367
           +T  LS AL  GRI   Y+F GP+G GKTS ARI A +LNC       PCG C  C++  
Sbjct: 21  VTAPLSVALDAGRINHAYLFSGPRGCGKTSSARILARSLNCAQGPTANPCGVCESCVSLA 80

Query: 366 -HKFGKTSILKEFTA--GGLQSTKGMKKMIHEVTRAVSFRYRVFIVDECHILSTHSWNAF 196
            +  G   +++   A  GG+  T+ ++         V  RYRVFIVDE H+++T  +NA 
Sbjct: 81  PNAPGSIDVVELDAASHGGVDDTRELRDRAFYAP--VQSRYRVFIVDEAHMVTTAGFNAL 138

Query: 195 MKAVEEAPKNVVFVLCTSSLEQLPHAVISRCQKFIFSKIKENDVVNRLQIIARQEGLEVD 16
           +K VEE P++++F+  T+  E++   + SR   + F  +    +   L  I  QEG+ VD
Sbjct: 139 LKIVEEPPEHLIFIFATTEPEKVLPTIRSRTHHYPFRLLPPRTMRALLARICEQEGVVVD 198
tr_hit_id A7QDG1
Definition tr|A7QDG1|A7QDG1_VITVI Chromosome chr10 scaffold_81, whole genome shotgun sequence OS=Vitis vinifera
Align length 182
Score (bit) 182.0
E-value 1.0e-44
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919501|Adiantum capillus-veneris mRNA, clone:
YMU001_000125_G09.
         (545 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7QDG1|A7QDG1_VITVI Chromosome chr10 scaffold_81, whole genom...   182   1e-44
tr|Q9SN33|Q9SN33_ARATH Putative uncharacterized protein F28A21.2...   178   1e-43
tr|Q75K66|Q75K66_ORYSJ Os05g0529600 protein OS=Oryza sativa subs...   178   1e-43
tr|B8B072|B8B072_ORYSI Putative uncharacterized protein OS=Oryza...   178   1e-43
tr|A3B639|A3B639_ORYSJ Putative uncharacterized protein OS=Oryza...   178   1e-43
tr|Q9FK71|Q9FK71_ARATH Similarity to DNA polymerase III OS=Arabi...   176   9e-43
tr|Q5JNF0|Q5JNF0_ORYSJ Putative DNA polymerase III subunit gamma...   172   1e-41
tr|B8A913|B8A913_ORYSI Putative uncharacterized protein OS=Oryza...   172   1e-41
tr|A3ANG4|A3ANG4_ORYSJ Putative uncharacterized protein OS=Oryza...   172   1e-41
tr|Q53M12|Q53M12_ORYSJ ATPase, AAA family protein OS=Oryza sativ...   170   4e-41
tr|B8BJV7|B8BJV7_ORYSI Putative uncharacterized protein OS=Oryza...   170   4e-41
tr|A7QCE6|A7QCE6_VITVI Chromosome undetermined scaffold_77, whol...   167   3e-40
tr|A5B4C6|A5B4C6_VITVI Putative uncharacterized protein OS=Vitis...   167   3e-40
tr|A9TL38|A9TL38_PHYPA Predicted protein (Fragment) OS=Physcomit...   166   7e-40
tr|Q2QW40|Q2QW40_ORYSJ Os12g0209300 protein OS=Oryza sativa subs...   164   4e-39
tr|A2ZIZ6|A2ZIZ6_ORYSI Putative uncharacterized protein OS=Oryza...   164   4e-39
tr|O64728|O64728_ARATH Similar to prokaryotic DNA polymerase III...   162   1e-38
tr|A7PCL7|A7PCL7_VITVI Chromosome chr17 scaffold_12, whole genom...   162   1e-38
tr|Q9M9R7|Q9M9R7_ARATH F14L17.24 protein OS=Arabidopsis thaliana...   161   2e-38
tr|A3CGJ3|A3CGJ3_ORYSJ Putative uncharacterized protein OS=Oryza...   160   5e-38
tr|A2ZJN8|A2ZJN8_ORYSI Putative uncharacterized protein OS=Oryza...   160   5e-38
tr|A9RJS6|A9RJS6_PHYPA Predicted protein (Fragment) OS=Physcomit...   158   2e-37
tr|Q1G919|Q1G919_LACDA DNA polymerase III, gamma/tau subunit OS=...   151   2e-35
tr|Q048W4|Q048W4_LACDB DNA polymerase III, gamma/tau subunit OS=...   151   2e-35
tr|Q81JC0|Q81JC0_BACCR DNA polymerase III subunit gamma/tau OS=B...   149   7e-35
tr|B7HIJ1|B7HIJ1_BACCE DNA polymerase III, gamma and tau subunit...   149   7e-35
tr|Q73FI6|Q73FI6_BACC1 DNA polymerase III, gamma and tau subunit...   149   9e-35
tr|B7HPT4|B7HPT4_BACCE DNA polymerase III, gamma and tau subunit...   149   9e-35
tr|B5VCY9|B5VCY9_BACCE DNA polymerase III, gamma and tau subunit...   149   9e-35
tr|Q81W18|Q81W18_BACAN DNA polymerase III, gamma and tau subunit...   149   1e-34

>tr|A7QDG1|A7QDG1_VITVI Chromosome chr10 scaffold_81, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00035826001
           PE=4 SV=1
          Length = 982

 Score =  182 bits (461), Expect = 1e-44
 Identities = 87/182 (47%), Positives = 124/182 (68%), Gaps = 1/182 (0%)
 Frame = -3

Query: 543 LITQVLSNALLKGRIASLYIFHGPQGTGKTSCARIFAIALNCTSADKLKPCGSCSECLAH 364
           L+ Q LSNA++K ++  LY+F+GP GTGKTSCARIFA ALNC S +  KPCG C+ C+AH
Sbjct: 369 LVAQALSNAVVKRKVGFLYVFYGPHGTGKTSCARIFARALNCPSMEHPKPCGFCNSCIAH 428

Query: 363 KFGKTSILKEFTAGGLQSTKGMKKMIHEVTRA-VSFRYRVFIVDECHILSTHSWNAFMKA 187
             GK+  ++E         +G+  ++  V  + +  +YRVFI D+C  LS   W+A  K 
Sbjct: 429 DMGKSRNIREVGPVSNLDFEGIMNLLDNVIASQLPTQYRVFIFDDCDTLSPDCWSAISKL 488

Query: 186 VEEAPKNVVFVLCTSSLEQLPHAVISRCQKFIFSKIKENDVVNRLQIIARQEGLEVDAEA 7
           ++ AP+ +VFVL +S+L+ LPH +ISRCQKF F K+K+ D++  LQ IA +E LE+D +A
Sbjct: 489 IDRAPRRMVFVLVSSTLDVLPHIIISRCQKFFFPKLKDADIIYTLQWIATKEDLEIDKDA 548

Query: 6   LK 1
           LK
Sbjct: 549 LK 550


>tr|Q9SN33|Q9SN33_ARATH Putative uncharacterized protein F28A21.230
           (Putative uncharacterized protein AT4g18820)
           OS=Arabidopsis thaliana GN=F28A21.230 PE=2 SV=1
          Length = 1057

 Score =  178 bits (452), Expect = 1e-43
 Identities = 89/182 (48%), Positives = 122/182 (67%), Gaps = 1/182 (0%)
 Frame = -3

Query: 543 LITQVLSNALLKGRIASLYIFHGPQGTGKTSCARIFAIALNCTSADKLKPCGSCSECLAH 364
           L+ Q LSNA+ + ++  LY+FHGP GTGKTSCARIFA ALNC S ++ KPCG+CS C++H
Sbjct: 450 LVVQALSNAVARRKLGLLYVFHGPNGTGKTSCARIFARALNCHSMEQPKPCGTCSSCVSH 509

Query: 363 KFGKTSILKEFTAGGLQSTKGMKKMIHEVTRAVSFRYRVFIVDECHILSTHSWNAFMKAV 184
             GK+  ++E    G    + +  ++       S   RVFI D+C  LS+  WNA  K V
Sbjct: 510 DMGKSWNIREVGPVGNYDFEKIMDLLDGNVMVSSQSPRVFIFDDCDTLSSDCWNALSKVV 569

Query: 183 EE-APKNVVFVLCTSSLEQLPHAVISRCQKFIFSKIKENDVVNRLQIIARQEGLEVDAEA 7
           +  AP++VVF+L  SSL+ LPH +ISRCQKF F K+K+ D+V  LQ IA +E +E+D +A
Sbjct: 570 DRAAPRHVVFILVCSSLDVLPHVIISRCQKFFFPKLKDADIVYSLQWIASKEEIEIDKDA 629

Query: 6   LK 1
           LK
Sbjct: 630 LK 631


>tr|Q75K66|Q75K66_ORYSJ Os05g0529600 protein OS=Oryza sativa subsp.
           japonica GN=OJ1131_E09.4 PE=4 SV=1
          Length = 1023

 Score =  178 bits (452), Expect = 1e-43
 Identities = 88/182 (48%), Positives = 123/182 (67%), Gaps = 1/182 (0%)
 Frame = -3

Query: 543 LITQVLSNALLKGRIASLYIFHGPQGTGKTSCARIFAIALNCTSADKLKPCGSCSECLAH 364
           L+ Q LSNA+LK +I  +Y+F+GP GTGKTSCAR+FA ALNC S +  +PC SC+ C+AH
Sbjct: 373 LVVQALSNAILKRKIGLVYVFYGPHGTGKTSCARVFAKALNCHSPEHPRPCDSCASCIAH 432

Query: 363 KFGKTSILKEFTAGGLQSTKGMKKMIHEVTRA-VSFRYRVFIVDECHILSTHSWNAFMKA 187
             GK+  L E    G      +  ++  V  + V  ++RVFIVD+C+ L   +W+   K 
Sbjct: 433 NLGKSRSLVEIGPVGNIDLDSIVDILDNVMLSPVPTQHRVFIVDDCNTLPPDTWSVISKV 492

Query: 186 VEEAPKNVVFVLCTSSLEQLPHAVISRCQKFIFSKIKENDVVNRLQIIARQEGLEVDAEA 7
           +E AP+ VVF+L + +L+ LPH ++SRCQKF F K+KE D+VN LQ I+  EGL+VD +A
Sbjct: 493 IERAPRRVVFILISPNLD-LPHIIVSRCQKFFFPKLKECDIVNTLQWISTSEGLDVDRDA 551

Query: 6   LK 1
           LK
Sbjct: 552 LK 553


>tr|B8B072|B8B072_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_20723 PE=4 SV=1
          Length = 1079

 Score =  178 bits (452), Expect = 1e-43
 Identities = 88/182 (48%), Positives = 123/182 (67%), Gaps = 1/182 (0%)
 Frame = -3

Query: 543 LITQVLSNALLKGRIASLYIFHGPQGTGKTSCARIFAIALNCTSADKLKPCGSCSECLAH 364
           L+ Q LSNA+LK +I  +Y+F+GP GTGKTSCAR+FA ALNC S +  +PC SC+ C+AH
Sbjct: 373 LVVQALSNAILKRKIGLVYVFYGPHGTGKTSCARVFAKALNCHSPEHPRPCDSCASCIAH 432

Query: 363 KFGKTSILKEFTAGGLQSTKGMKKMIHEVTRA-VSFRYRVFIVDECHILSTHSWNAFMKA 187
             GK+  L E    G      +  ++  V  + V  ++RVFIVD+C+ L   +W+   K 
Sbjct: 433 NLGKSRSLVEIGPVGNIDLDSIVDILDNVMLSPVPTQHRVFIVDDCNTLPPDTWSVISKV 492

Query: 186 VEEAPKNVVFVLCTSSLEQLPHAVISRCQKFIFSKIKENDVVNRLQIIARQEGLEVDAEA 7
           +E AP+ VVF+L + +L+ LPH ++SRCQKF F K+KE D+VN LQ I+  EGL+VD +A
Sbjct: 493 IERAPRRVVFILISPNLD-LPHIIVSRCQKFFFPKLKECDIVNTLQWISTSEGLDVDRDA 551

Query: 6   LK 1
           LK
Sbjct: 552 LK 553


>tr|A3B639|A3B639_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_018511 PE=4 SV=1
          Length = 1011

 Score =  178 bits (452), Expect = 1e-43
 Identities = 88/182 (48%), Positives = 123/182 (67%), Gaps = 1/182 (0%)
 Frame = -3

Query: 543 LITQVLSNALLKGRIASLYIFHGPQGTGKTSCARIFAIALNCTSADKLKPCGSCSECLAH 364
           L+ Q LSNA+LK +I  +Y+F+GP GTGKTSCAR+FA ALNC S +  +PC SC+ C+AH
Sbjct: 361 LVVQALSNAILKRKIGLVYVFYGPHGTGKTSCARVFAKALNCHSPEHPRPCDSCASCIAH 420

Query: 363 KFGKTSILKEFTAGGLQSTKGMKKMIHEVTRA-VSFRYRVFIVDECHILSTHSWNAFMKA 187
             GK+  L E    G      +  ++  V  + V  ++RVFIVD+C+ L   +W+   K 
Sbjct: 421 NLGKSRSLVEIGPVGNIDLDSIVDILDNVMLSPVPTQHRVFIVDDCNTLPPDTWSVISKV 480

Query: 186 VEEAPKNVVFVLCTSSLEQLPHAVISRCQKFIFSKIKENDVVNRLQIIARQEGLEVDAEA 7
           +E AP+ VVF+L + +L+ LPH ++SRCQKF F K+KE D+VN LQ I+  EGL+VD +A
Sbjct: 481 IERAPRRVVFILISPNLD-LPHIIVSRCQKFFFPKLKECDIVNTLQWISTSEGLDVDRDA 539

Query: 6   LK 1
           LK
Sbjct: 540 LK 541


>tr|Q9FK71|Q9FK71_ARATH Similarity to DNA polymerase III
           OS=Arabidopsis thaliana GN=At5g45720 PE=4 SV=1
          Length = 900

 Score =  176 bits (445), Expect = 9e-43
 Identities = 85/181 (46%), Positives = 119/181 (65%)
 Frame = -3

Query: 543 LITQVLSNALLKGRIASLYIFHGPQGTGKTSCARIFAIALNCTSADKLKPCGSCSECLAH 364
           L+ Q LSNA+ K R+  LY+FHGP GTGKTSCAR+FA ALNC S ++ KPCG CS C+++
Sbjct: 362 LVVQALSNAIAKRRVGLLYVFHGPNGTGKTSCARVFARALNCHSTEQSKPCGVCSSCVSY 421

Query: 363 KFGKTSILKEFTAGGLQSTKGMKKMIHEVTRAVSFRYRVFIVDECHILSTHSWNAFMKAV 184
             GK   ++E   G ++S      +     R    +  V I D+C  +ST  WN   K V
Sbjct: 422 DDGKNRYIREM--GPVKSFDFENLLDKTNIRQQQKQQLVLIFDDCDTMSTDCWNTLSKIV 479

Query: 183 EEAPKNVVFVLCTSSLEQLPHAVISRCQKFIFSKIKENDVVNRLQIIARQEGLEVDAEAL 4
           + AP+ VVFVL  SSL+ LPH ++SRCQKF F K+K+ D+++ LQ+IA +E +++D +AL
Sbjct: 480 DRAPRRVVFVLVCSSLDVLPHIIVSRCQKFFFPKLKDVDIIDSLQLIASKEEIDIDKDAL 539

Query: 3   K 1
           K
Sbjct: 540 K 540


>tr|Q5JNF0|Q5JNF0_ORYSJ Putative DNA polymerase III subunit
           gamma/tau (Os01g0730900 protein) OS=Oryza sativa subsp.
           japonica GN=P0435H01.30 PE=4 SV=1
          Length = 622

 Score =  172 bits (436), Expect = 1e-41
 Identities = 85/182 (46%), Positives = 119/182 (65%), Gaps = 1/182 (0%)
 Frame = -3

Query: 543 LITQVLSNALLKGRIASLYIFHGPQGTGKTSCARIFAIALNCTSADKLKPCGSCSECLAH 364
           L+ Q LSNA+L+ +I  +Y+F+GP GTGKTSCAR+FA ALNC S +  +PC SC+ C+AH
Sbjct: 369 LVVQALSNAVLRRKIGLVYVFYGPHGTGKTSCARVFAKALNCHSPEHPRPCDSCTSCIAH 428

Query: 363 KFGKTSILKEFTAGGLQSTKGMKKMIHEVTRA-VSFRYRVFIVDECHILSTHSWNAFMKA 187
             GK+  + E    G     G+  ++  V  +     YRVFI D+C  L   +W+   K 
Sbjct: 429 NLGKSRSVMEIGPVGNIDMDGIVDVLDNVMLSPAPSHYRVFIFDDCDTLPADTWSLISKV 488

Query: 186 VEEAPKNVVFVLCTSSLEQLPHAVISRCQKFIFSKIKENDVVNRLQIIARQEGLEVDAEA 7
           V+ AP+ VVF+L + +L+ LPH ++SRCQKF F K+KE D+VN LQ I+  E L+VD +A
Sbjct: 489 VDRAPRRVVFILVSPNLD-LPHIILSRCQKFFFPKLKECDIVNTLQWISTSESLDVDRDA 547

Query: 6   LK 1
           LK
Sbjct: 548 LK 549


>tr|B8A913|B8A913_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_03625 PE=4 SV=1
          Length = 815

 Score =  172 bits (436), Expect = 1e-41
 Identities = 85/182 (46%), Positives = 119/182 (65%), Gaps = 1/182 (0%)
 Frame = -3

Query: 543 LITQVLSNALLKGRIASLYIFHGPQGTGKTSCARIFAIALNCTSADKLKPCGSCSECLAH 364
           L+ Q LSNA+L+ +I  +Y+F+GP GTGKTSCAR+FA ALNC S +  +PC SC+ C+AH
Sbjct: 135 LVVQALSNAVLRRKIGLVYVFYGPHGTGKTSCARVFAKALNCHSPEHPRPCDSCTSCIAH 194

Query: 363 KFGKTSILKEFTAGGLQSTKGMKKMIHEVTRA-VSFRYRVFIVDECHILSTHSWNAFMKA 187
             GK+  + E    G     G+  ++  V  +     YRVFI D+C  L   +W+   K 
Sbjct: 195 NLGKSRSVMEIGPVGNIDMDGIVDVLDNVMLSPAPSHYRVFIFDDCDTLPADTWSLISKV 254

Query: 186 VEEAPKNVVFVLCTSSLEQLPHAVISRCQKFIFSKIKENDVVNRLQIIARQEGLEVDAEA 7
           V+ AP+ VVF+L + +L+ LPH ++SRCQKF F K+KE D+VN LQ I+  E L+VD +A
Sbjct: 255 VDRAPRRVVFILVSPNLD-LPHIILSRCQKFFFPKLKECDIVNTLQWISTSESLDVDRDA 313

Query: 6   LK 1
           LK
Sbjct: 314 LK 315


>tr|A3ANG4|A3ANG4_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_012336 PE=4 SV=1
          Length = 1022

 Score =  172 bits (436), Expect = 1e-41
 Identities = 85/182 (46%), Positives = 119/182 (65%), Gaps = 1/182 (0%)
 Frame = -3

Query: 543 LITQVLSNALLKGRIASLYIFHGPQGTGKTSCARIFAIALNCTSADKLKPCGSCSECLAH 364
           L+ Q LSNA+L+ +I  +Y+F+GP GTGKTSCAR+FA ALNC S +  +PC SC+ C+AH
Sbjct: 369 LVVQALSNAVLRRKIGLVYVFYGPHGTGKTSCARVFAKALNCHSPEHPRPCDSCTSCIAH 428

Query: 363 KFGKTSILKEFTAGGLQSTKGMKKMIHEVTRA-VSFRYRVFIVDECHILSTHSWNAFMKA 187
             GK+  + E    G     G+  ++  V  +     YRVFI D+C  L   +W+   K 
Sbjct: 429 NLGKSRSVMEIGPVGNIDMDGIVDVLDNVMLSPAPSHYRVFIFDDCDTLPADTWSLISKV 488

Query: 186 VEEAPKNVVFVLCTSSLEQLPHAVISRCQKFIFSKIKENDVVNRLQIIARQEGLEVDAEA 7
           V+ AP+ VVF+L + +L+ LPH ++SRCQKF F K+KE D+VN LQ I+  E L+VD +A
Sbjct: 489 VDRAPRRVVFILVSPNLD-LPHIILSRCQKFFFPKLKECDIVNTLQWISTSESLDVDRDA 547

Query: 6   LK 1
           LK
Sbjct: 548 LK 549


>tr|Q53M12|Q53M12_ORYSJ ATPase, AAA family protein OS=Oryza sativa
           subsp. japonica GN=LOC_Os11g13990 PE=4 SV=1
          Length = 1121

 Score =  170 bits (431), Expect = 4e-41
 Identities = 87/180 (48%), Positives = 121/180 (67%), Gaps = 1/180 (0%)
 Frame = -3

Query: 540 ITQVLSNALLKGRIASLYIFHGPQGTGKTSCARIFAIALNCTSADKLKPCGSCSECLAHK 361
           + Q L+NA+++ RIA  Y+FHGP+GTGKTS ARIF+ AL+C +  + KPCG+C EC    
Sbjct: 355 VVQSLNNAIIRERIAPAYLFHGPRGTGKTSAARIFSAALSCVAIGENKPCGACMECTDFF 414

Query: 360 FGKTSILKEFTAGGLQSTKGMKKMIHEV-TRAVSFRYRVFIVDECHILSTHSWNAFMKAV 184
            G    L E  A   +S   ++ +I  +   A S RY+VF+VDECH++S+  W+AFMK +
Sbjct: 415 TGNGINLIEVDASNRKSINRIRHLIENIPASATSSRYKVFVVDECHMVSSKVWSAFMKFL 474

Query: 183 EEAPKNVVFVLCTSSLEQLPHAVISRCQKFIFSKIKENDVVNRLQIIARQEGLEVDAEAL 4
           +E    VVF+  T   E LP AVISRCQK++FSKIK+ D+V RL+ IA +E L+V+  AL
Sbjct: 475 DEPLPRVVFIFITIDPENLPRAVISRCQKYMFSKIKDIDIVCRLRKIAVKENLDVELAAL 534