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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP919509
Clone id YMU001_000125_H07
Library
Length 506
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000125_H07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
TTGTGATTCTAATTGAAAGTAGAATTTCTAGAAAGCAATAGCACATACACCTTTGCCAGT
ATAAAATGGTAGGCCAATGTGGAGAGTTTCGCTTCACTTTTCACCTTGTTGGCACTGTCA
GAGGTAGTTGCTAATGCATCATTTCGATGTTTTACTACAAAAATGTGGCCTTGTATCTCG
ACCACATGTAAAATTTTTCTATTAAGATCAGAACCGTCCGATCTTTCTAACTGAGAGTGA
GAGCTTTGGCGTCTGTGTGCTCGTTGTCTACACGCGATAGAGAGAAAGAGAGACAGAGAG
GGCTTTCCTCTTACGATACGGGTTGTAGCTGAGGAGGTTACGGGCAGGTACTCACGGGCC
CCCCAGCCTCCCTCTCTCTCTCTCATGGCAGTAGTGCCATATTCTCCCAATAGCCATCCT
AAAGAGAGTGACGATAGAGAGGAGCTGCGCTTCTCTTTCTTCGTCGTAACTGTGACAAGC
AAGAACGGGGGTTCTATCTATGGCGT
■■Homology search results ■■ -
sp_hit_id O14064
Definition sp|O14064|BIR1_SCHPO Protein bir1 OS=Schizosaccharomyces pombe
Align length 52
Score (bit) 30.8
E-value 3.5
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919509|Adiantum capillus-veneris mRNA, clone:
YMU001_000125_H07.
         (491 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O14064|BIR1_SCHPO Protein bir1 OS=Schizosaccharomyces pombe G...    31   3.5  
sp|Q62849|PCSK7_RAT Proprotein convertase subtilisin/kexin type ...    30   5.9  

>sp|O14064|BIR1_SCHPO Protein bir1 OS=Schizosaccharomyces pombe
           GN=bir1 PE=1 SV=1
          Length = 997

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
 Frame = +1

Query: 268 RKRDREGFPLTIRV---VAEEVTGRYSRAPQPPSLSLMAVVPYSPNSHPKES 414
           RK +    PLT+ +    +EE   + +RAPQ P+  ++   P   N  PK+S
Sbjct: 247 RKNNLNARPLTMSLYTNTSEEKDSQPTRAPQSPTKPVLLTAPRRKNKSPKKS 298


>sp|Q62849|PCSK7_RAT Proprotein convertase subtilisin/kexin type 7
           OS=Rattus norvegicus GN=Pcsk7 PE=1 SV=1
          Length = 783

 Score = 30.0 bits (66), Expect = 5.9
 Identities = 17/37 (45%), Positives = 19/37 (51%), Gaps = 5/37 (13%)
 Frame = -2

Query: 331 CP*PPQLQP-----VS*EESPLCLSFSLSRVDNEHTD 236
           CP PPQ Q       + E  PLC S  L  VD+EH D
Sbjct: 703 CPWPPQSQNSKEVGTALESMPLCSSKDLDGVDSEHGD 739
tr_hit_id A8WVH1
Definition tr|A8WVH1|A8WVH1_CAEBR Putative uncharacterized protein OS=Caenorhabditis briggsae
Align length 79
Score (bit) 34.7
E-value 2.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919509|Adiantum capillus-veneris mRNA, clone:
YMU001_000125_H07.
         (491 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A8WVH1|A8WVH1_CAEBR Putative uncharacterized protein OS=Caeno...    35   2.4  
tr|B0DHZ8|B0DHZ8_LACBS Predicted protein OS=Laccaria bicolor (st...    34   3.2  
tr|B0D290|B0D290_LACBS Predicted protein OS=Laccaria bicolor (st...    34   3.2  
tr|B0D3D2|B0D3D2_LACBS Predicted protein OS=Laccaria bicolor (st...    34   4.2  
tr|A6UEL2|A6UEL2_SINMW Cytochrome P450 OS=Sinorhizobium medicae ...    33   5.5  
tr|B6BQR2|B6BQR2_9RICK D-amino-acid dehydrogenase small chain OS...    33   5.5  
tr|Q2UPR4|Q2UPR4_ASPOR Predicted protein OS=Aspergillus oryzae G...    33   7.1  
tr|B8MW87|B8MW87_ASPFL Chromosome segregation protein Spc105, pu...    33   7.1  

>tr|A8WVH1|A8WVH1_CAEBR Putative uncharacterized protein
           OS=Caenorhabditis briggsae GN=CBG03621 PE=4 SV=2
          Length = 549

 Score = 34.7 bits (78), Expect = 2.4
 Identities = 24/79 (30%), Positives = 36/79 (45%)
 Frame = +1

Query: 244 ARCLHAIERKRDREGFPLTIRVVAEEVTGRYSRAPQPPSLSLMAVVPYSPNSHPKESDDR 423
           AR  H I   +D+ G  +TI  +   ++G  +  P PPSLSL A   Y       + D+ 
Sbjct: 395 ARFQHKI---KDKSGLAMTILTIP--LSGENNSLPPPPSLSLEASTAYPSPHGSNDYDEY 449

Query: 424 EELRFSFFVVTVTSKNGGS 480
           E++    F  T T+    S
Sbjct: 450 EKISDDGFYSTTTTATSSS 468


>tr|B0DHZ8|B0DHZ8_LACBS Predicted protein OS=Laccaria bicolor
           (strain S238N-H82) GN=LACBIDRAFT_329430 PE=4 SV=1
          Length = 311

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 21/46 (45%), Positives = 24/46 (52%)
 Frame = +1

Query: 346 PQPPSLSLMAVVPYSPNSHPKESDDREELRFSFFVVTVTSKNGGSI 483
           P PPS  L    PYSP +HP    D E+L   F  VT +S N G I
Sbjct: 266 PTPPSSPLYN--PYSPTTHPSPLFDLEDLVSDFDSVTSSSGNIGDI 309


>tr|B0D290|B0D290_LACBS Predicted protein OS=Laccaria bicolor
           (strain S238N-H82) GN=LACBIDRAFT_324546 PE=4 SV=1
          Length = 311

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 20/46 (43%), Positives = 24/46 (52%)
 Frame = +1

Query: 346 PQPPSLSLMAVVPYSPNSHPKESDDREELRFSFFVVTVTSKNGGSI 483
           P PPS  L    PYSP +HP    D E+L   F  +T +S N G I
Sbjct: 266 PTPPSSPLYN--PYSPTTHPSPLFDLEDLVSDFDSITSSSDNIGDI 309


>tr|B0D3D2|B0D3D2_LACBS Predicted protein OS=Laccaria bicolor
           (strain S238N-H82) GN=LACBIDRAFT_324888 PE=4 SV=1
          Length = 307

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 20/46 (43%), Positives = 24/46 (52%)
 Frame = +1

Query: 346 PQPPSLSLMAVVPYSPNSHPKESDDREELRFSFFVVTVTSKNGGSI 483
           P PPS  L    PYSP +HP    D E+L   F  +T +S N G I
Sbjct: 262 PTPPSSPLYN--PYSPMTHPSPLFDLEDLVSDFDSITSSSNNIGDI 305


>tr|A6UEL2|A6UEL2_SINMW Cytochrome P450 OS=Sinorhizobium medicae
           (strain WSM419) GN=Smed_3268 PE=3 SV=1
          Length = 466

 Score = 33.5 bits (75), Expect = 5.5
 Identities = 18/53 (33%), Positives = 28/53 (52%)
 Frame = +1

Query: 220 E*ELWRLCARCLHAIERKRDREGFPLTIRVVAEEVTGRYSRAPQPPSLSLMAV 378
           E E+WR   + +  +   R  +GF   +  V+EE  GRY+RA   P ++  AV
Sbjct: 98  EGEVWRRSRKAMAPVFTPRHAKGFAGQMLRVSEEFVGRYARAASEPFVTNAAV 150


>tr|B6BQR2|B6BQR2_9RICK D-amino-acid dehydrogenase small chain
           OS=Candidatus Pelagibacter sp. HTCC7211 GN=dadA PE=4
           SV=1
          Length = 413

 Score = 33.5 bits (75), Expect = 5.5
 Identities = 15/61 (24%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
 Frame = +2

Query: 56  RPMWRVSLHFSPCWHCQ--R*LLMHHFDVLLQKCGLVSRPHVKFFY*DQNRPIFLTESES 229
           +P++   +++    H +  + +L+  FD+ ++K G  ++ +++    D+ +PIF TE++S
Sbjct: 183 KPIYHAGVYYPYARHARNPKKILLKLFDLFIKKGGKFNKVNIQEINFDEEKPIFKTENQS 242

Query: 230 F 232
           F
Sbjct: 243 F 243


>tr|Q2UPR4|Q2UPR4_ASPOR Predicted protein OS=Aspergillus oryzae
            GN=AO090005001543 PE=4 SV=1
          Length = 1544

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
 Frame = +1

Query: 256  HAIERKRDREGFPL-TIRVVA----EEVTGRYSRAPQPPSLSLM-AVVPYSPNSHPKES 414
            H  +R R RE  P+  IR+ A    +E  GR  R+P PPS+    A V  +P   PK S
Sbjct: 915  HTPKRLRGREASPVKNIRLPAPPTKDETVGRLGRSPAPPSIERSPAKVSITPTKEPKGS 973


>tr|B8MW87|B8MW87_ASPFL Chromosome segregation protein Spc105,
           putative OS=Aspergillus flavus NRRL3357 GN=AFLA_087770
           PE=4 SV=1
          Length = 739

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
 Frame = +1

Query: 256 HAIERKRDREGFPL-TIRVVA----EEVTGRYSRAPQPPSLSLM-AVVPYSPNSHPKES 414
           H  +R R RE  P+  IR+ A    +E  GR  R+P PPS+    A V  +P   PK S
Sbjct: 110 HTPKRLRGREASPVKNIRLPAPPTKDETVGRLGRSPAPPSIERSPAKVSITPTKEPKGS 168