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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP919514
Clone id YMU001_000126_A02
Library
Length 559
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000126_A02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
CTACACGCCAAAAAGGTCCGAATTTTCTTCGCTCCACAGCTTGAGTCCTTTTCTCGCCTT
TACATTCTAAGATTGCTCTGCAAATTTTCCATTCTGTTGGTTGGGCTTTTGTGATCCTTC
GTTCTAGGTCCATTTTCTGTTGGTTGGGTCTTCTGCTTGCGTTAAAGCTTGTGGGTTCTT
GTGCTTTGTTGAGGTTGTCCATTGTGCCCATGACTTAAGTTCTCTGTTGCTTAAATCCTT
CCAGTTGGTCGGAAAAATTTGTCTTTTTTGTGATAACCATGCGCCGGAAGTGCATAAATC
AAAGAGTATAACTTCATTGTTCGCGTAGGTGTCTGTGAGAAGTGAGTTTCTTCTCTTCAC
CACTGGATTTGACTCATCTCTGGCAAAAGCCTTCAAGTATAGTGGCAATCATTCTCTGTT
TTTCATCAGTACATTTTGTATTTTGTGAGCCATGTAATCATCAGTGCACTGCTGCCTTTT
GTTGAGCGTACCATGGATTTGCTGTTTTTCTCTTCAATGTGGTATACTCGTTATGATTGT
GTCAGCAATCAAAGCCATG
■■Homology search results ■■ -
sp_hit_id B0G163
Definition sp|B0G163|EXOC5_DICDI Exocyst complex component 5 OS=Dictyostelium discoideum
Align length 63
Score (bit) 32.7
E-value 1.2
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919514|Adiantum capillus-veneris mRNA, clone:
YMU001_000126_A02.
         (544 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|B0G163|EXOC5_DICDI Exocyst complex component 5 OS=Dictyosteli...    33   1.2  
sp|Q8NWQ6|EBH_STAAW Extracellular matrix-binding protein ebh OS=...    32   2.6  
sp|A5ISW6|EBH_STAA9 Extracellular matrix-binding protein ebh OS=...    32   2.6  
sp|A6U1Q5|EBH_STAA2 Extracellular matrix-binding protein ebh OS=...    32   2.6  
sp|Q99U54|EBHA_STAAN Extracellular matrix-binding protein ebhA O...    32   2.6  
sp|Q931R6|EBHA_STAAM Extracellular matrix-binding protein ebhA O...    32   2.6  
sp|A7X2C3|EBHA_STAA1 Extracellular matrix-binding protein ebhA O...    32   2.6  
sp|A8Z414|EBH_STAAT Extracellular matrix-binding protein ebh OS=...    31   3.4  
sp|Q6GGX3|EBH_STAAR Extracellular matrix-binding protein ebh OS=...    31   3.4  
sp|Q5HFY8|EBH_STAAC Extracellular matrix-binding protein ebh OS=...    31   3.4  
sp|Q2FYJ6|EBH_STAA8 Extracellular matrix-binding protein ebh OS=...    31   3.4  
sp|Q2FH04|EBH_STAA3 Extracellular matrix-binding protein ebh OS=...    31   3.4  
sp|A6QGY4|EBHA_STAAE Extracellular matrix-binding protein ebhA O...    31   3.4  
sp|P70434|IRF7_MOUSE Interferon regulatory factor 7 OS=Mus muscu...    30   5.8  
sp|Q7NF75|SYI_GLOVI Isoleucyl-tRNA synthetase OS=Gloeobacter vio...    30   7.6  
sp|Q8HWS3|RFX6_HUMAN DNA-binding protein RFX6 OS=Homo sapiens GN...    30   7.6  
sp|Q54GU4|Y6505_DICDI Uncharacterized protein DDB_G0289975 OS=Di...    30   9.9  
sp|A2C071|SYI_PROM1 Isoleucyl-tRNA synthetase OS=Prochlorococcus...    30   9.9  
sp|O93308|SMC1A_XENLA Structural maintenance of chromosomes prot...    30   9.9  
sp|Q9Z1M9|SMC1A_RAT Structural maintenance of chromosomes protei...    30   9.9  
sp|Q9CU62|SMC1A_MOUSE Structural maintenance of chromosomes prot...    30   9.9  
sp|Q14683|SMC1A_HUMAN Structural maintenance of chromosomes prot...    30   9.9  
sp|O97593|SMC1A_BOVIN Structural maintenance of chromosomes prot...    30   9.9  

>sp|B0G163|EXOC5_DICDI Exocyst complex component 5 OS=Dictyostelium
           discoideum GN=exoc5 PE=3 SV=1
          Length = 978

 Score = 32.7 bits (73), Expect = 1.2
 Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 6/63 (9%)
 Frame = -1

Query: 298 SYTL*FMHFRRM------VITKKTNFSDQLEGFKQQRT*VMGTMDNLNKAQEPTSFNASR 137
           SY   F HF+++      + TK  +F D+L+   QQ+    G +  +N   E  S  AS 
Sbjct: 343 SYQECFQHFKKLEKGVNTIGTKAVHFGDELDSVNQQKVKAQGALSLINYLLELNSVGASS 402

Query: 136 RPN 128
             N
Sbjct: 403 EEN 405


>sp|Q8NWQ6|EBH_STAAW Extracellular matrix-binding protein ebh
            OS=Staphylococcus aureus (strain MW2) GN=ebh PE=1 SV=1
          Length = 9904

 Score = 31.6 bits (70), Expect = 2.6
 Identities = 14/28 (50%), Positives = 20/28 (71%)
 Frame = -1

Query: 244  NFSDQLEGFKQQRT*VMGTMDNLNKAQE 161
            N ++ LE  KQQ T  +G++DNLN AQ+
Sbjct: 6487 NSNENLEAAKQQATQSLGSLDNLNNAQK 6514


>sp|A5ISW6|EBH_STAA9 Extracellular matrix-binding protein ebh
            OS=Staphylococcus aureus (strain JH9) GN=ebh PE=4 SV=1
          Length = 10624

 Score = 31.6 bits (70), Expect = 2.6
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = -1

Query: 244  NFSDQLEGFKQQRT*VMGTMDNLNKAQEPTSFN 146
            N ++ LE  KQQ T  +G++DNLN AQ+    N
Sbjct: 7130 NGNENLEAAKQQATQSLGSLDNLNNAQKQAVTN 7162


>sp|A6U1Q5|EBH_STAA2 Extracellular matrix-binding protein ebh
            OS=Staphylococcus aureus (strain JH1) GN=ebh PE=4 SV=1
          Length = 10624

 Score = 31.6 bits (70), Expect = 2.6
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = -1

Query: 244  NFSDQLEGFKQQRT*VMGTMDNLNKAQEPTSFN 146
            N ++ LE  KQQ T  +G++DNLN AQ+    N
Sbjct: 7130 NGNENLEAAKQQATQSLGSLDNLNNAQKQAVTN 7162


>sp|Q99U54|EBHA_STAAN Extracellular matrix-binding protein ebhA
            OS=Staphylococcus aureus (strain N315) GN=ebhA PE=4 SV=1
          Length = 6713

 Score = 31.6 bits (70), Expect = 2.6
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = -1

Query: 244  NFSDQLEGFKQQRT*VMGTMDNLNKAQEPTSFN 146
            N ++ LE  KQQ T  +G++DNLN AQ+    N
Sbjct: 3219 NGNENLEAAKQQATQSLGSLDNLNNAQKQAVTN 3251


>sp|Q931R6|EBHA_STAAM Extracellular matrix-binding protein ebhA
            OS=Staphylococcus aureus (strain Mu50 / ATCC 700699)
            GN=ebhA PE=1 SV=1
          Length = 6713

 Score = 31.6 bits (70), Expect = 2.6
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = -1

Query: 244  NFSDQLEGFKQQRT*VMGTMDNLNKAQEPTSFN 146
            N ++ LE  KQQ T  +G++DNLN AQ+    N
Sbjct: 3219 NGNENLEAAKQQATQSLGSLDNLNNAQKQAVTN 3251


>sp|A7X2C3|EBHA_STAA1 Extracellular matrix-binding protein ebhA
            OS=Staphylococcus aureus (strain Mu3 / ATCC 700698)
            GN=ebhA PE=4 SV=1
          Length = 6713

 Score = 31.6 bits (70), Expect = 2.6
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = -1

Query: 244  NFSDQLEGFKQQRT*VMGTMDNLNKAQEPTSFN 146
            N ++ LE  KQQ T  +G++DNLN AQ+    N
Sbjct: 3219 NGNENLEAAKQQATQSLGSLDNLNNAQKQAVTN 3251


>sp|A8Z414|EBH_STAAT Extracellular matrix-binding protein ebh
            OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=ebh
            PE=4 SV=1
          Length = 10421

 Score = 31.2 bits (69), Expect = 3.4
 Identities = 14/30 (46%), Positives = 21/30 (70%)
 Frame = -1

Query: 244  NFSDQLEGFKQQRT*VMGTMDNLNKAQEPT 155
            N ++ LE  KQQ +  +G++DNLN AQ+ T
Sbjct: 7130 NGNENLEAAKQQASQSLGSLDNLNNAQKQT 7159


>sp|Q6GGX3|EBH_STAAR Extracellular matrix-binding protein ebh
            OS=Staphylococcus aureus (strain MRSA252) GN=ebh PE=4
            SV=1
          Length = 10746

 Score = 31.2 bits (69), Expect = 3.4
 Identities = 14/28 (50%), Positives = 20/28 (71%)
 Frame = -1

Query: 244  NFSDQLEGFKQQRT*VMGTMDNLNKAQE 161
            N ++ LE  KQQ T  +G++DNLN AQ+
Sbjct: 7126 NGNENLEAAKQQATQSLGSLDNLNNAQK 7153


>sp|Q5HFY8|EBH_STAAC Extracellular matrix-binding protein ebh
            OS=Staphylococcus aureus (strain COL) GN=ebh PE=4 SV=1
          Length = 10498

 Score = 31.2 bits (69), Expect = 3.4
 Identities = 14/30 (46%), Positives = 21/30 (70%)
 Frame = -1

Query: 244  NFSDQLEGFKQQRT*VMGTMDNLNKAQEPT 155
            N ++ LE  KQQ +  +G++DNLN AQ+ T
Sbjct: 7130 NGNENLEAAKQQASQSLGSLDNLNNAQKQT 7159
tr_hit_id Q22TC4
Definition tr|Q22TC4|Q22TC4_TETTH Putative uncharacterized protein OS=Tetrahymena thermophila SB210
Align length 117
Score (bit) 34.3
E-value 4.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919514|Adiantum capillus-veneris mRNA, clone:
YMU001_000126_A02.
         (544 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q22TC4|Q22TC4_TETTH Putative uncharacterized protein OS=Tetra...    34   4.4  
tr|Q23CW2|Q23CW2_TETTH EF hand family protein OS=Tetrahymena the...    34   5.8  
tr|Q5A6R0|Q5A6R0_CANAL Putative uncharacterized protein NAF1 OS=...    34   5.8  
tr|Q965S5|Q965S5_CAEEL Synaptotagmin protein 3 OS=Caenorhabditis...    30   6.5  
tr|Q5A708|Q5A708_CANAL Putative uncharacterized protein NAF1 OS=...    33   7.6  
tr|Q6MT43|Q6MT43_MYCMS Prolipoprotein OS=Mycoplasma mycoides sub...    33   9.7  
tr|Q1NHZ3|Q1NHZ3_9SPHN TonB-dependent receptor OS=Sphingomonas s...    33   9.9  

>tr|Q22TC4|Q22TC4_TETTH Putative uncharacterized protein
            OS=Tetrahymena thermophila SB210 GN=TTHERM_00180920 PE=4
            SV=1
          Length = 1258

 Score = 34.3 bits (77), Expect = 4.4
 Identities = 29/117 (24%), Positives = 52/117 (44%), Gaps = 15/117 (12%)
 Frame = +2

Query: 134  SSACVKACGFLCFVEVVHCAHDLSSLLLKSFQLVGKICL--FCDNHAPEV--HKSKSITS 301
            ++AC+  C   C  ++++   D  S+  K+     K CL    D+   E+  H +  I  
Sbjct: 1097 TNACLAIC--YCIKQIINSNLDRKSIFEKTM----KFCLTHIMDSQIIEILQHSTNPIMK 1150

Query: 302  LFA*VSVRSEFLLFTT-----------GFDSSLAKAFKYSGNHSLFFISTFCIL*AM 439
            +F  ++++ + L F             GF+SSL   F Y G+  LF     C++ A+
Sbjct: 1151 VFDHLTIQQQPLQFAVYMAFYFFYHNFGFESSLQNIFSYGGDSCLFGSIVGCLIGAI 1207


>tr|Q23CW2|Q23CW2_TETTH EF hand family protein OS=Tetrahymena
            thermophila SB210 GN=TTHERM_00052280 PE=4 SV=1
          Length = 6110

 Score = 33.9 bits (76), Expect = 5.8
 Identities = 20/61 (32%), Positives = 31/61 (50%)
 Frame = -1

Query: 190  TMDNLNKAQEPTSFNASRRPNQQKMDLERRITKAQPTEWKICRAILECKGEKRTQAVERR 11
            T+  LN A   T+F  S+   QQK D E ++   Q  E K    + E KG+ + +  +R+
Sbjct: 3612 TLSELNNALADTAFYKSKSQQQQKKDQEEQVLSLQ--ERKDAAKLEEIKGQIKIKLTQRQ 3669

Query: 10   K 8
            K
Sbjct: 3670 K 3670


>tr|Q5A6R0|Q5A6R0_CANAL Putative uncharacterized protein NAF1
           OS=Candida albicans GN=NAF1 PE=4 SV=1
          Length = 612

 Score = 33.9 bits (76), Expect = 5.8
 Identities = 23/91 (25%), Positives = 40/91 (43%)
 Frame = -1

Query: 349 SGEEKKLTSHRHLREQ*SYTL*FMHFRRMVITKKTNFSDQLEGFKQQRT*VMGTMDNLNK 170
           SG+EK  T +R L +Q             ++    +FS   E   QQ T +   +++   
Sbjct: 5   SGKEKNKTQNRDLIKQ------------QLLYSDCSFSKMSESTNQQETALREIVEDTTN 52

Query: 169 AQEPTSFNASRRPNQQKMDLERRITKAQPTE 77
           A EPT+ + +  PN+   + E   T+   +E
Sbjct: 53  ANEPTAIDKTTLPNETSHERETTTTENASSE 83


>tr|Q965S5|Q965S5_CAEEL Synaptotagmin protein 3 OS=Caenorhabditis
           elegans GN=snt-3 PE=2 SV=2
          Length = 452

 Score = 30.0 bits (66), Expect(2) = 6.5
 Identities = 30/117 (25%), Positives = 48/117 (41%), Gaps = 7/117 (5%)
 Frame = -2

Query: 390 PLYLKAFARDESNPVVKRRNSLLT----DTYANNEVI---LFDLCTSGAWLSQKRQIFPT 232
           P Y ++F+ D ++  ++R +  +T    D   +NE I   +   C +G  L Q       
Sbjct: 208 PYYNESFSFDVTSEKMQRVHLHVTVSDYDRVGSNERIGQVIIGTCATGVALKQ------- 260

Query: 231 NWKDLSNRELKSWAQWTTSTKHKNPQALTQAEDPTNRKWT*NEGSQKPNQQNGKFAE 61
            W D+     +S AQW T    +N   L      T   +T N  S+  N  N +  E
Sbjct: 261 -WNDMLATPRRSVAQWHTLHAMENLIVLFCVGTATGNHFTFNAPSEISNANNWEHEE 316



 Score = 22.7 bits (47), Expect(2) = 6.5
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -1

Query: 508 TTLKRKTANPWY 473
           TT+K KT NP+Y
Sbjct: 199 TTIKMKTLNPYY 210


>tr|Q5A708|Q5A708_CANAL Putative uncharacterized protein NAF1
           OS=Candida albicans GN=NAF1 PE=4 SV=1
          Length = 612

 Score = 33.5 bits (75), Expect = 7.6
 Identities = 22/91 (24%), Positives = 39/91 (42%)
 Frame = -1

Query: 349 SGEEKKLTSHRHLREQ*SYTL*FMHFRRMVITKKTNFSDQLEGFKQQRT*VMGTMDNLNK 170
           SG+EK  T +R L             +  ++    +FS   E   QQ T +   +++   
Sbjct: 5   SGKEKNKTRNRDL------------IKHQLLYSNCSFSKMSESTNQQETALREIVEDTTN 52

Query: 169 AQEPTSFNASRRPNQQKMDLERRITKAQPTE 77
           A EPT+ + +  PN+   + E   T+   +E
Sbjct: 53  ANEPTAIDKTTLPNETSHERETTTTENASSE 83


>tr|Q6MT43|Q6MT43_MYCMS Prolipoprotein OS=Mycoplasma mycoides subsp.
           mycoides SC GN=lpp PE=4 SV=1
          Length = 224

 Score = 33.1 bits (74), Expect = 9.7
 Identities = 15/45 (33%), Positives = 21/45 (46%)
 Frame = -3

Query: 215 ATENLSHGHNGQPQQSTRTHKL*RKQKTQPTENGPRTKDHKSPTN 81
           A +N++      P +  RT K      T+P EN P+  D K P N
Sbjct: 23  ACKNINKSKKEDPSKPDRTPKTPENDSTKPEENQPKKPDDKKPNN 67


>tr|Q1NHZ3|Q1NHZ3_9SPHN TonB-dependent receptor OS=Sphingomonas sp.
           SKA58 GN=SKA58_00625 PE=3 SV=1
          Length = 968

 Score = 33.1 bits (74), Expect = 9.9
 Identities = 14/52 (26%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
 Frame = -2

Query: 369 ARDESNPVVKRRNSLLTDTYANNEVILFDLCTSGAWLSQKRQIFPTN--WKD 220
           +R+ S+P+    + +++DT+A+    LF +  +G+W  +K  +   N  W+D
Sbjct: 177 SRNNSDPITPELSGIISDTFADG---LFGIAVTGSWQKRKASVNQANVGWRD 225