BP919528
Clone id YMU001_000126_B07
Library
Length 434
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000126_B07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TTTTTTTTTTTTTTTTAACTCAAGTAGGCAGAACATTTCATAGTCAAAGAAAAAACAACA
ATTCATAATCAACAATACATTGCCTACCTATCGAATGTCATTGCAGTTCTAGTTCAAAAC
AAAATCTATACCAACAATTAGATTTGTTGCATTAGCTCCACCATGCATTCTGTAATAGGT
TACTACCTTCTCTTCCATGCCTTGTCTTCCCCTCTCACTTCTAGACATGTTGAGGTAGGT
TTGAAGTAGGCTGAAAATAGAAGCATGCCATTAAAGCCTGAACAACCCTTGTAGGATGAC
ATTTGACTCCATGATCCATGCTCCACATCATAGAGAAGGGGAGAACTATAAAGCCCTTCC
TTATACTCATCCAGATAATCAACAGCCATCATACATATATGCCTTCCATCAGTAGCAAAG
GAGATGTCATTCTC
■■Homology search results ■■ -
sp_hit_id P39839
Definition sp|P39839|YUXL_BACSU Uncharacterized peptidase yuxL OS=Bacillus subtilis
Align length 36
Score (bit) 30.4
E-value 2.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919528|Adiantum capillus-veneris mRNA, clone:
YMU001_000126_B07.
(418 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P39839|YUXL_BACSU Uncharacterized peptidase yuxL OS=Bacillus ... 30 2.9
sp|P00573|RPOL_BPT7 DNA-directed RNA polymerase OS=Enterobacteri... 29 6.4
sp|Q28BR5|PREP_XENTR Presequence protease, mitochondrial OS=Xeno... 29 6.4
sp|Q6PF24|PREP_XENLA Presequence protease, mitochondrial OS=Xeno... 29 6.4

>sp|P39839|YUXL_BACSU Uncharacterized peptidase yuxL OS=Bacillus
subtilis GN=yuxL PE=3 SV=2
Length = 657

Score = 30.4 bits (67), Expect = 2.9
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -1

Query: 406 SFATDGRHICMMAVDYLDEYKEGLYSSPLLYDVEHG 299
SF+ DGR++ ++ + EYK S LYD+E G
Sbjct: 245 SFSPDGRYLALLGNE--KEYKNATLSKAWLYDIEQG 278


>sp|P00573|RPOL_BPT7 DNA-directed RNA polymerase OS=Enterobacteria
phage T7 GN=1 PE=1 SV=2
Length = 883

Score = 29.3 bits (64), Expect = 6.4
Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = -2

Query: 159 LQNAWWS*CNKSNCWYRFCFELE-LQ*HSIGRQC 61
L+N WW+ + C+ FCFE +Q H + C
Sbjct: 497 LENTWWAEQDSPFCFLAFCFEYAGVQHHGLSYNC 530


>sp|Q28BR5|PREP_XENTR Presequence protease, mitochondrial OS=Xenopus
tropicalis GN=pitrm1 PE=2 SV=1
Length = 1027

Score = 29.3 bits (64), Expect = 6.4
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1

Query: 271 PCRMTFDSMIHAPHHREGENYKALPYTHPD 360
PC+M + P + GE + +PYTHPD
Sbjct: 840 PCQMKTHFSLSFPVNYIGECVRTVPYTHPD 869


>sp|Q6PF24|PREP_XENLA Presequence protease, mitochondrial OS=Xenopus
laevis GN=pitrm1 PE=2 SV=1
Length = 1027

Score = 29.3 bits (64), Expect = 6.4
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1

Query: 271 PCRMTFDSMIHAPHHREGENYKALPYTHPD 360
PC+M + P + GE + +PYTHPD
Sbjct: 840 PCQMKTHFCLSFPVNYIGECVRTVPYTHPD 869


tr_hit_id B6MF75
Definition tr|B6MF75|B6MF75_BRAFL Putative uncharacterized protein (Fragment) OS=Branchiostoma floridae
Align length 57
Score (bit) 33.1
E-value 7.0
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919528|Adiantum capillus-veneris mRNA, clone:
YMU001_000126_B07.
(418 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B6MF75|B6MF75_BRAFL Putative uncharacterized protein (Fragmen... 33 7.0
tr|Q1DI16|Q1DI16_COCIM Predicted protein OS=Coccidioides immitis... 33 7.0

>tr|B6MF75|B6MF75_BRAFL Putative uncharacterized protein (Fragment)
OS=Branchiostoma floridae GN=BRAFLDRAFT_224841 PE=4 SV=1
Length = 415

Score = 33.1 bits (74), Expect = 7.0
Identities = 14/57 (24%), Positives = 26/57 (45%)
Frame = -2

Query: 384 IYV*WLLIIWMSIRKGFIVLPFSMMWSMDHGVKCHPTRVVQALMACFYFQPTSNLPQ 214
IY+ W L ++ F V+ +S+ W + + + L + F F+P LP+
Sbjct: 32 IYIAWFLAFSVAFASSFFVVLYSLEWGYKKSEEWFTSFAMSFLQSAFVFEPAKKLPK 88


>tr|Q1DI16|Q1DI16_COCIM Predicted protein OS=Coccidioides immitis
GN=CIMG_10047 PE=4 SV=1
Length = 304

Score = 33.1 bits (74), Expect = 7.0
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = -1

Query: 379 CMMAVDYLDEYKEGLYSSPLLYDVEHGSWSQMSSYKGCSGFNGM 248
C +D + E+ GL + P D EHGSW Q + Y C +G+
Sbjct: 143 CEFWLDPMGEF--GLANLPGRVDTEHGSWGQRNYYNSCGRSDGI 184