BP919530 |
Clone id |
YMU001_000126_B09 |
Library |
YMU01 |
Length |
510 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000126_B09. |
Accession |
BP919530 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
CTTCAGCATCTTGAGACATTTCCTCCAACCAGTAATCATCCAAAGCTGTGTCATTATCAA TGCGGATATAGTCAAAGTGGTCAGAGTCCTCACCTGATAGAAACTTCTCTTGCATGATTC GTGTAAAATCATCCATGTTAGACTCTAGCTCTTCCCTTGAAATTGTAGGCTTTGGATTGC TTTCCCCGGCAACAAACTTATCAAGCATATATTTAGAGAAACGCTCAAGCTTCAACTGCT GCCGTTCCTCAAAACTGAGTACTCTGCTTTCAGGTTCTCTATCACTCAGCTCTGTATTGC CTTCTGCTTCTGTTGCAAAGCTGGAAAGTCCTGCTCCACTGCTGCCATCACGCTCATGCA ACCTCTGCTGCTTAGGCTCTTCTTCCTTTCCCTCTTCATTTTCCGAATCTTCCTCCTCCT CTTCATCTTCATCTTCATCTTCCTCTTCATTTTCCGAATCTTCTTCCTCCTCTTCCTCTT TATTTTTCGAATCTTCCTCCTCCTCTTCAT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q96F63 |
Definition |
sp|Q96F63|CCD97_HUMAN Coiled-coil domain-containing protein 97 OS=Homo sapiens |
Align length |
96 |
Score (bit) |
33.9 |
E-value |
0.46 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q5VPF3 |
Definition |
tr|Q5VPF3|Q5VPF3_ORYSJ cDNA clone:001-207-E05, full insert sequence OS=Oryza sativa subsp. japonica |
Align length |
125 |
Score (bit) |
79.0 |
E-value |
1.0e-13 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP919530|Adiantum capillus-veneris mRNA, clone: YMU001_000126_B09. (510 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q5VPF3|Q5VPF3_ORYSJ cDNA clone:001-207-E05, full insert seque... 79 1e-13 tr|Q0DER3|Q0DER3_ORYSJ Os06g0139700 protein (Fragment) OS=Oryza ... 79 1e-13 tr|A2Y924|A2Y924_ORYSI Putative uncharacterized protein OS=Oryza... 79 1e-13 tr|A7PCI3|A7PCI3_VITVI Chromosome chr2 scaffold_11, whole genome... 79 2e-13 tr|Q9LTB9|Q9LTB9_ARATH Genomic DNA, chromosome 5, TAC clone:K14A... 77 6e-13 tr|Q2A9K1|Q2A9K1_BRAOL Putative uncharacterized protein OS=Brass... 77 6e-13 tr|Q8LBU5|Q8LBU5_ARATH Putative uncharacterized protein OS=Arabi... 76 1e-12 tr|B8BFF1|B8BFF1_ORYSI Putative uncharacterized protein OS=Oryza... 73 9e-12 tr|Q8S818|Q8S818_ORYSJ Putative uncharacterized protein OSJNBa00... 72 1e-11 tr|A9TJ46|A9TJ46_PHYPA Predicted protein OS=Physcomitrella paten... 72 1e-11 tr|B8AUK7|B8AUK7_ORYSI Putative uncharacterized protein OS=Oryza... 72 2e-11 tr|A2WUD5|A2WUD5_ORYSI Putative uncharacterized protein OS=Oryza... 72 2e-11 tr|A3BYJ9|A3BYJ9_ORYSJ Putative uncharacterized protein OS=Oryza... 63 9e-09 tr|A4RUQ6|A4RUQ6_OSTLU Predicted protein OS=Ostreococcus lucimar... 62 2e-08 tr|Q01CD0|Q01CD0_OSTTA [S] KOG3044 Uncharacterized conserved pro... 53 1e-05 tr|Q24CV1|Q24CV1_TETTH Putative uncharacterized protein OS=Tetra... 52 2e-05 tr|B6KUL9|B6KUL9_TOXGO Putative uncharacterized protein OS=Toxop... 50 6e-05 tr|A9US89|A9US89_MONBE Predicted protein OS=Monosiga brevicollis... 46 0.001 tr|B4NWV9|B4NWV9_DROYA GE11055 OS=Drosophila yakuba GN=GE11055 P... 45 0.002 tr|B4MTJ4|B4MTJ4_DROWI GK23819 OS=Drosophila willistoni GN=GK238... 45 0.002 tr|B3N738|B3N738_DROER GG23456 OS=Drosophila erecta GN=GG23456 P... 45 0.002 tr|Q9VLP6|Q9VLP6_DROME CG7810 OS=Drosophila melanogaster GN=CG78... 45 0.003 tr|Q29MN3|Q29MN3_DROPS GA20602 OS=Drosophila pseudoobscura pseud... 45 0.003 tr|B4G901|B4G901_DROPE GL19383 OS=Drosophila persimilis GN=GL193... 45 0.003 tr|B4Q6Q1|B4Q6Q1_DROSI GD22421 OS=Drosophila simulans GN=GD22421... 44 0.005 tr|B4HYI3|B4HYI3_DROSE GM13067 OS=Drosophila sechellia GN=GM1306... 44 0.005 tr|B3MPG4|B3MPG4_DROAN GF15265 OS=Drosophila ananassae GN=GF1526... 43 0.010 tr|A7RIY8|A7RIY8_NEMVE Predicted protein (Fragment) OS=Nematoste... 42 0.017 tr|B4KJM9|B4KJM9_DROMO GI14237 OS=Drosophila mojavensis GN=GI142... 41 0.029 tr|B4LSH7|B4LSH7_DROVI GJ20547 OS=Drosophila virilis GN=GJ20547 ... 41 0.038
>tr|Q5VPF3|Q5VPF3_ORYSJ cDNA clone:001-207-E05, full insert sequence OS=Oryza sativa subsp. japonica GN=OSJNBa0041F13.33 PE=2 SV=1 Length = 311
Score = 79.0 bits (193), Expect = 1e-13 Identities = 48/125 (38%), Positives = 65/125 (52%), Gaps = 13/125 (10%) Frame = -3
Query: 337 GAGLSSFATEAEGNTELSDREPESRVLSFEERQQLKLER-------------FSKYMLDK 197 G G E E E + E E S EE Q + +E ++ + Sbjct: 183 GGGAEEAMEEQEEEEEEEEEEEEEEEES-EEEQGMDMEEKGRGADNSSENPSVTEVVDSN 241
Query: 196 FVAGESNPKPTISREELESNMDDFTRIMQEKFLSGEDSDHFDYIRIDNDTALDDYWLEEM 17 AG S K T+S E++E ++ FT +MQ+KFLSGEDS+H DY RIDND LDD+W +E Sbjct: 242 KTAGAS--KQTLSAEDMEDQLEQFTSLMQQKFLSGEDSEHMDYSRIDNDEMLDDHWSKEA 299
Query: 16 SQDAE 2 + DAE Sbjct: 300 NYDAE 304
>tr|Q0DER3|Q0DER3_ORYSJ Os06g0139700 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os06g0139700 PE=4 SV=1 Length = 324
Score = 79.0 bits (193), Expect = 1e-13 Identities = 48/125 (38%), Positives = 65/125 (52%), Gaps = 13/125 (10%) Frame = -3
Query: 337 GAGLSSFATEAEGNTELSDREPESRVLSFEERQQLKLER-------------FSKYMLDK 197 G G E E E + E E S EE Q + +E ++ + Sbjct: 196 GGGAEEAMEEQEEEEEEEEEEEEEEEES-EEEQGMDMEEKGRGADNSSENPSVTEVVDSN 254
Query: 196 FVAGESNPKPTISREELESNMDDFTRIMQEKFLSGEDSDHFDYIRIDNDTALDDYWLEEM 17 AG S K T+S E++E ++ FT +MQ+KFLSGEDS+H DY RIDND LDD+W +E Sbjct: 255 KTAGAS--KQTLSAEDMEDQLEQFTSLMQQKFLSGEDSEHMDYSRIDNDEMLDDHWSKEA 312
Query: 16 SQDAE 2 + DAE Sbjct: 313 NYDAE 317
>tr|A2Y924|A2Y924_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_21562 PE=4 SV=1 Length = 311
Score = 79.0 bits (193), Expect = 1e-13 Identities = 48/125 (38%), Positives = 65/125 (52%), Gaps = 13/125 (10%) Frame = -3
Query: 337 GAGLSSFATEAEGNTELSDREPESRVLSFEERQQLKLER-------------FSKYMLDK 197 G G E E E + E E S EE Q + +E ++ + Sbjct: 183 GGGAEEAMEEQEEEEEEEEEEEEEEEES-EEEQGMDMEEKGRGADNSSENPSVTEVVDSN 241
Query: 196 FVAGESNPKPTISREELESNMDDFTRIMQEKFLSGEDSDHFDYIRIDNDTALDDYWLEEM 17 AG S K T+S E++E ++ FT +MQ+KFLSGEDS+H DY RIDND LDD+W +E Sbjct: 242 KTAGAS--KQTLSAEDMEDQLEQFTSLMQQKFLSGEDSEHMDYSRIDNDEMLDDHWSKEA 299
Query: 16 SQDAE 2 + DAE Sbjct: 300 NYDAE 304
>tr|A7PCI3|A7PCI3_VITVI Chromosome chr2 scaffold_11, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00015875001 PE=4 SV=1 Length = 307
Score = 78.6 bits (192), Expect = 2e-13 Identities = 35/61 (57%), Positives = 44/61 (72%) Frame = -3
Query: 184 ESNPKPTISREELESNMDDFTRIMQEKFLSGEDSDHFDYIRIDNDTALDDYWLEEMSQDA 5 ESN K T+S E++ MD FT IM +KFLSGED D+ DY +ID+D LDD+WL E + DA Sbjct: 239 ESNQKATLSAVEMQDQMDQFTHIMHQKFLSGEDRDYLDYSKIDDDETLDDHWLREANYDA 298
Query: 4 E 2 E Sbjct: 299 E 299
>tr|Q9LTB9|Q9LTB9_ARATH Genomic DNA, chromosome 5, TAC clone:K14A3 (AT5g47090/K14A3_4) OS=Arabidopsis thaliana GN=At5g47090 PE=2 SV=1 Length = 310
Score = 76.6 bits (187), Expect = 6e-13 Identities = 43/119 (36%), Positives = 60/119 (50%), Gaps = 2/119 (1%) Frame = -3
Query: 352 RDGSSGAGLSSFATEAEGNTELSDREPESRVLSFEERQQLKLERFSKYMLDKFVAGESNP 173 R+ G+S E S+ E E EE + + + ++ E Sbjct: 185 REEQQRLGVSESDWVGNEKMEESEEEEEEESEEEEEEEDEEAKNPTEASSSSLNGKEQKE 244
Query: 172 KPT--ISREELESNMDDFTRIMQEKFLSGEDSDHFDYIRIDNDTALDDYWLEEMSQDAE 2 K T + EE++ MD FT IM++KFLSGED H DY +IDND LDD+WL E+ +DAE Sbjct: 245 KATTVLPPEEMQDMMDQFTSIMEQKFLSGEDHQHLDYAKIDNDETLDDHWLREIGRDAE 303
>tr|Q2A9K1|Q2A9K1_BRAOL Putative uncharacterized protein OS=Brassica oleracea GN=26.t00106 PE=4 SV=1 Length = 370
Score = 76.6 bits (187), Expect = 6e-13 Identities = 54/146 (36%), Positives = 69/146 (47%), Gaps = 22/146 (15%) Frame = -3
Query: 373 KQQRLH--ERDGSSGAGLSSFATEAEGNTELSDREPESR------------------VLS 254 +QQRL E D + E+E E D E E VL Sbjct: 220 EQQRLGVAECDWVGNEKMEESEEESEQGVETEDEEEEEEKQTGASSSLAEVTCFLLCVLV 279
Query: 253 FEERQQLKLERFSKYMLDKFVAG--ESNPKPTISREELESNMDDFTRIMQEKFLSGEDSD 80 + Q L FS + D F AG E+ + EE++ M+ FT IMQ+KFLSGED + Sbjct: 280 YSIVVQNPLLHFSSF--DYFQAGGTENKQGTVLPPEEMQEMMEQFTSIMQQKFLSGEDHE 337
Query: 79 HFDYIRIDNDTALDDYWLEEMSQDAE 2 H DY +IDND LDD+WL E+ DAE Sbjct: 338 HLDYTKIDNDENLDDHWLREVGLDAE 363
>tr|Q8LBU5|Q8LBU5_ARATH Putative uncharacterized protein OS=Arabidopsis thaliana PE=2 SV=1 Length = 294
Score = 75.9 bits (185), Expect = 1e-12 Identities = 41/103 (39%), Positives = 58/103 (56%), Gaps = 3/103 (2%) Frame = -3
Query: 301 GNTELSDREPESRVLSFEERQQLKLERFSKYMLDKFVAG-ESNPKPT--ISREELESNMD 131 GN ++ + E E EE ++ + + + G E K T + EE++ MD Sbjct: 185 GNEKMEESEEEEEESEEEEEEEDEEAKNPTEASSSSLNGKEQKEKATTVLPPEEMQDMMD 244
Query: 130 DFTRIMQEKFLSGEDSDHFDYIRIDNDTALDDYWLEEMSQDAE 2 FT IM++KFLSGED H DY +IDND LDD+WL E+ +DAE Sbjct: 245 QFTSIMEQKFLSGEDHQHLDYAKIDNDETLDDHWLREIGRDAE 287
>tr|B8BFF1|B8BFF1_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_32623 PE=4 SV=1 Length = 191
Score = 72.8 bits (177), Expect = 9e-12 Identities = 35/67 (52%), Positives = 47/67 (70%) Frame = -3
Query: 205 LDKFVAGESNPKPTISREELESNMDDFTRIMQEKFLSGEDSDHFDYIRIDNDTALDDYWL 26 L+ +AG S K T+S EE++ ++ FT +MQ+KFLSGED H DY RIDND LDD+W Sbjct: 119 LEDPLAGTS--KQTLSAEEMDDQLEQFTSLMQQKFLSGEDFGHMDYSRIDNDEMLDDHWS 176
Query: 25 EEMSQDA 5 +E + DA Sbjct: 177 KEANYDA 183
>tr|Q8S818|Q8S818_ORYSJ Putative uncharacterized protein OSJNBa0020E23.6 (Putative uncharacterized protein) OS=Oryza sativa subsp. japonica GN=OSJNBa0020E23.6 PE=4 SV=1 Length = 149
Score = 72.4 bits (176), Expect = 1e-11 Identities = 36/75 (48%), Positives = 47/75 (62%), Gaps = 3/75 (4%) Frame = -3
Query: 220 FSKYMLDKFVAGES---NPKPTISREELESNMDDFTRIMQEKFLSGEDSDHFDYIRIDND 50 F M+D G S K T+S EE++ ++ FT +MQ+KFLSGED H DY RIDND Sbjct: 67 FHGRMVDSNKTGGSPAGTSKQTLSAEEMDDQLEQFTSLMQQKFLSGEDFGHMDYSRIDND 126
Query: 49 TALDDYWLEEMSQDA 5 LDD+W +E + DA Sbjct: 127 EMLDDHWSKEANYDA 141
>tr|A9TJ46|A9TJ46_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_146343 PE=4 SV=1 Length = 314
Score = 72.4 bits (176), Expect = 1e-11 Identities = 33/54 (61%), Positives = 42/54 (77%) Frame = -3
Query: 163 ISREELESNMDDFTRIMQEKFLSGEDSDHFDYIRIDNDTALDDYWLEEMSQDAE 2 +S EL M+D TR+MQEKFLSG DS++ DY RIDND ALDD W+ E+++DAE Sbjct: 254 LSPAELGDKMEDLTRVMQEKFLSGMDSEYVDYERIDNDAALDDDWMPEITRDAE 307
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