NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | ダウンロード | 利用許諾 | ヘルプ
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP919537
Clone id YMU001_000126_C04
Library
Length 510
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000126_C04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
GTCTAGCACAAGGCAGGCAATTAAAGCCTCTGTTTTGGAATGATGTTGGATGCCGTTTGC
CAGGCAGACTGCCAACAATCGCCATAGCCTCGATAGAAGACCCTAAATAGCCACTCCTGA
ATGCAGCAAAATTTTGGCTTGCAGGTCGAGACCCAGTGAGAGGCGCAGAGCCACAATTCC
AATGTGTACCAGAAGCTTGAGTGTACCTATCACTTCTTCCATCAGAAATATTCAAATTTC
TTTCACGAGGGCTGATGTCCTTGTGACTAGATCCAACGGTGCACTGAATATTTGCAAAGC
AGCTCTTGGGAAATTGATCAGAACCCACACTCTGGCTATTGTAGAGTGCCAACGATTTTC
CTGACGGAGAGGAGAACTTATCGACAGATAGCCATCGTTGTAGCCATCCAGGTTGTGTGT
TCCACTCCTTTCTACTTGTCTCATTGTTTATTAAATCGAGAGAGAGATTAACTGAACGCA
TCCCTGAAGGAGAACTGCCATCATCTGGAA
■■Homology search results ■■ -
sp_hit_id Q4WCX9
Definition sp|Q4WCX9|YA280_ASPFU Uncharacterized protein AFUA_6G02800 OS=Aspergillus fumigatus
Align length 115
Score (bit) 32.0
E-value 1.7
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919537|Adiantum capillus-veneris mRNA, clone:
YMU001_000126_C04.
         (510 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q4WCX9|YA280_ASPFU Uncharacterized protein AFUA_6G02800 OS=As...    32   1.7  
sp|A5CTB2|NHAA2_CLAM3 Na(+)/H(+) antiporter nhaA 2 OS=Clavibacte...    31   2.9  
sp|A0FKG7|CAN7_PIG Calpain-7 OS=Sus scrofa GN=CAPN7 PE=2 SV=1          31   2.9  
sp|Q9R1S8|CAN7_MOUSE Calpain-7 OS=Mus musculus GN=Capn7 PE=2 SV=1      31   2.9  
sp|Q9Y6W3|CAN7_HUMAN Calpain-7 OS=Homo sapiens GN=CAPN7 PE=1 SV=1      31   3.9  
sp|A1DDL6|MDV1_NEOFI Mitochondrial division protein 1 OS=Neosart...    30   5.0  
sp|Q4WVS4|MDV1_ASPFU Mitochondrial division protein 1 OS=Aspergi...    30   5.0  
sp|P55127|FRPC_NEIMC Iron-regulated protein frpC OS=Neisseria me...    30   6.5  
sp|P33146|CAD15_MOUSE Cadherin-15 OS=Mus musculus GN=Cdh15 PE=2 ...    30   6.6  

>sp|Q4WCX9|YA280_ASPFU Uncharacterized protein AFUA_6G02800
           OS=Aspergillus fumigatus GN=AFUA_6G02800 PE=1 SV=1
          Length = 242

 Score = 32.0 bits (71), Expect = 1.7
 Identities = 32/115 (27%), Positives = 44/115 (38%), Gaps = 6/115 (5%)
 Frame = -3

Query: 391 LSVDKFSSPSGKSLALYNSQ--SVGSDQFPKSCFANIQCTVGSSHKDISPRERNLNISDG 218
           L V     PSG   A  + Q  +   D+ P SC  N   +  +     + R  N + +DG
Sbjct: 125 LQVQSNGDPSGGLYACADIQFSTTAQDEKPSSCTNNTGISAIAFTGAAAERNANESTADG 184

Query: 217 R----SDRYTQASGTHWNCGSAPLTGSRPASQNFAAFRSGYLGSSIEAMAIVGSL 65
           +    S   +  SG+H    SA  T S  AS    A         I   A+VG L
Sbjct: 185 QAQSGSSGSSSDSGSHSGHSSATQTSSTTASSTAGAVALETAAWGILGAAVVGGL 239


>sp|A5CTB2|NHAA2_CLAM3 Na(+)/H(+) antiporter nhaA 2 OS=Clavibacter
           michiganensis subsp. michiganensis (strain NCPPB 382)
           GN=nhaA2 PE=3 SV=1
          Length = 409

 Score = 31.2 bits (69), Expect = 2.9
 Identities = 29/102 (28%), Positives = 45/102 (44%)
 Frame = -1

Query: 390 YLSISSPLRQENRWHSTIARVWVLINFPRAALQIFSAPLDLVTRTSALVKEI*IFLMEEV 211
           YL+I++    E  W    A     I F    L +F   L    R         +FL+   
Sbjct: 106 YLAITAGSGLERGWPVPTATD---IAFALGVLAVFGRGLPAAVR---------VFLL--A 151

Query: 210 IGTLKLLVHIGIVALRLSLGLDLQAKILLHSGVAI*GLLSRL 85
           +  L  L+ IGI+A+  + GLDL A  +  +GV +  ++ RL
Sbjct: 152 LAVLDDLIAIGIIAVFFTTGLDLGALAIAVAGVVLFAVVGRL 193


>sp|A0FKG7|CAN7_PIG Calpain-7 OS=Sus scrofa GN=CAPN7 PE=2 SV=1
          Length = 813

 Score = 31.2 bits (69), Expect = 2.9
 Identities = 17/61 (27%), Positives = 30/61 (49%)
 Frame = +2

Query: 176 IPMCTRSLSVPITSSIRNIQISFTRADVLVTRSNGALNICKAALGKLIRTHTLAIVECQR 355
           I M + S +    +S R +   F + DVL+T S G +   +     L+ TH  A+++ + 
Sbjct: 408 IAMHSDSQTFSKDNSFRMLYQRFHKGDVLITASTGVMTEAEGEKWGLVPTHAYAVLDIRE 467

Query: 356 F 358
           F
Sbjct: 468 F 468


>sp|Q9R1S8|CAN7_MOUSE Calpain-7 OS=Mus musculus GN=Capn7 PE=2 SV=1
          Length = 813

 Score = 31.2 bits (69), Expect = 2.9
 Identities = 17/61 (27%), Positives = 30/61 (49%)
 Frame = +2

Query: 176 IPMCTRSLSVPITSSIRNIQISFTRADVLVTRSNGALNICKAALGKLIRTHTLAIVECQR 355
           I M + S +    +S R +   F + DVL+T S G +   +     L+ TH  A+++ + 
Sbjct: 408 IAMHSDSQTFSKDNSFRMLYQRFHKGDVLITASTGVMTEAEGEKWGLVPTHAYAVLDIRE 467

Query: 356 F 358
           F
Sbjct: 468 F 468


>sp|Q9Y6W3|CAN7_HUMAN Calpain-7 OS=Homo sapiens GN=CAPN7 PE=1 SV=1
          Length = 813

 Score = 30.8 bits (68), Expect = 3.9
 Identities = 17/61 (27%), Positives = 30/61 (49%)
 Frame = +2

Query: 176 IPMCTRSLSVPITSSIRNIQISFTRADVLVTRSNGALNICKAALGKLIRTHTLAIVECQR 355
           I M + S +    +S R +   F + DVL+T S G +   +     L+ TH  A+++ + 
Sbjct: 408 IAMHSDSQTFSKDNSFRMLYQRFHKGDVLITASTGMMTEAEGEKWGLVPTHAYAVLDIRE 467

Query: 356 F 358
           F
Sbjct: 468 F 468


>sp|A1DDL6|MDV1_NEOFI Mitochondrial division protein 1
           OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 /
           NRRL 181) GN=mdv1 PE=3 SV=1
          Length = 658

 Score = 30.4 bits (67), Expect = 5.0
 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
 Frame = -3

Query: 205 YTQASGTHWNCGS---APLTGSRPASQNFAAFRSGYL 104
           Y +A G HW+CG+   A  +G  PA+      + GYL
Sbjct: 608 YDKADGHHWDCGAGVGADESGPAPATVERVRLKDGYL 644


>sp|Q4WVS4|MDV1_ASPFU Mitochondrial division protein 1
           OS=Aspergillus fumigatus GN=mdv1 PE=3 SV=2
          Length = 658

 Score = 30.4 bits (67), Expect = 5.0
 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
 Frame = -3

Query: 205 YTQASGTHWNCGS---APLTGSRPASQNFAAFRSGYL 104
           Y +A G HW+CG+   A  +G  PA+      + GYL
Sbjct: 608 YDKADGHHWDCGAGVGADESGPAPATVERVRLKDGYL 644


>sp|P55127|FRPC_NEIMC Iron-regulated protein frpC OS=Neisseria
           meningitidis serogroup C GN=frpC PE=3 SV=1
          Length = 1829

 Score = 30.0 bits (66), Expect = 6.5
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = -1

Query: 360 ENRWHSTIARVWVLINFPRAALQIFSAPLDLVTRTS 253
           EN W  T+ +   L  F R ALQ FS  +DL+ + +
Sbjct: 65  ENLWDDTVGKKTRLEKFDRVALQHFSQYVDLINKNN 100


>sp|P33146|CAD15_MOUSE Cadherin-15 OS=Mus musculus GN=Cdh15 PE=2
           SV=2
          Length = 784

 Score = 30.0 bits (66), Expect = 6.6
 Identities = 19/46 (41%), Positives = 25/46 (54%)
 Frame = +3

Query: 144 GRDPVRGAEPQFQCVPEA*VYLSLLPSEIFKFLSRGLMSL*LDPTV 281
           GR P+R   P F  VP+    L   PS+I  F+S GL +   DP+V
Sbjct: 685 GRPPLRRDAP-FSYVPQPHRVLPTSPSDIANFISDGLEAADSDPSV 729
tr_hit_id Q4QDQ5
Definition tr|Q4QDQ5|Q4QDQ5_LEIMA Putative uncharacterized protein OS=Leishmania major
Align length 136
Score (bit) 35.8
E-value 1.2
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919537|Adiantum capillus-veneris mRNA, clone:
YMU001_000126_C04.
         (510 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q4QDQ5|Q4QDQ5_LEIMA Putative uncharacterized protein OS=Leish...    36   1.2  
tr|A1DLA4|A1DLA4_NEOFI GPI anchored protein, putative OS=Neosart...    35   1.6  
tr|Q5D868|Q5D868_SPIOL DNA-directed RNA polymerase (Fragment) OS...    35   2.1  
tr|B0DMS4|B0DMS4_LACBS Predicted protein OS=Laccaria bicolor (st...    35   2.1  
tr|B8NH49|B8NH49_ASPFL Putative uncharacterized protein OS=Asper...    34   3.6  
tr|Q8DIR7|Q8DIR7_THEEB Tetrapyrrole methylase family protein OS=...    34   3.7  
tr|Q4X3N8|Q4X3N8_PLACH Putative uncharacterized protein (Fragmen...    34   4.7  
tr|A9T8R1|A9T8R1_PHYPA Predicted protein OS=Physcomitrella paten...    33   6.1  
tr|A7EGT0|A7EGT0_SCLS1 Putative uncharacterized protein OS=Scler...    33   6.1  
tr|B8QS85|B8QS85_9CHLA Major outer membrane protein OS=Chlamydop...    33   8.0  

>tr|Q4QDQ5|Q4QDQ5_LEIMA Putative uncharacterized protein
           OS=Leishmania major GN=LmjF18.1340 PE=4 SV=1
          Length = 768

 Score = 35.8 bits (81), Expect = 1.2
 Identities = 35/136 (25%), Positives = 59/136 (43%), Gaps = 13/136 (9%)
 Frame = -3

Query: 490 PSGMRSVNLSLDLINNETSRKEWNTQPGWLQRWLSVDKFS------SPSGKSLALYNSQ- 332
           P+ +  V   L  I + +S    ++ P  L +  S  +        SPSG    L+ ++ 
Sbjct: 216 PNLVDGVGAPLQAIYSSSSSSSTSSAPSPLAQTTSSPQCGGNTSCVSPSGTCSLLFEAEV 275

Query: 331 --SVGSDQFPKSCFANIQCTVGSSHKD--ISPRERNLNISDGR--SDRYTQASGTHWNCG 170
             S  + +   +  A  +  +G +H+   ISP E N  + DGR  S +     G   +CG
Sbjct: 276 NISSPNAETASAAQALDEDALGETHQCTFISPPENNAKVDDGRTRSPKTPSRGGPSKSCG 335

Query: 169 SAPLTGSRPASQNFAA 122
           SAP   S P + + A+
Sbjct: 336 SAPSAKSNPRADHAAS 351


>tr|A1DLA4|A1DLA4_NEOFI GPI anchored protein, putative
           OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 /
           NRRL 181) GN=NFIA_049130 PE=4 SV=1
          Length = 238

 Score = 35.4 bits (80), Expect = 1.6
 Identities = 31/111 (27%), Positives = 43/111 (38%), Gaps = 2/111 (1%)
 Frame = -3

Query: 391 LSVDKFSSPSGKSLALYNSQ--SVGSDQFPKSCFANIQCTVGSSHKDISPRERNLNISDG 218
           L V     PSG   A  + Q  S    + P SC  N   +  +     + R  N + +DG
Sbjct: 125 LQVQSNGDPSGGLYACADIQFSSTAQSEEPSSCTNNTGISAIAFTGAAAERNANESTADG 184

Query: 217 RSDRYTQASGTHWNCGSAPLTGSRPASQNFAAFRSGYLGSSIEAMAIVGSL 65
           ++   +  SG+H    SA  T S  AS    A         I   A+VG L
Sbjct: 185 QAQSGSSDSGSHSGHSSATQTSSTTASSTAGAVALETAAWGILGAAVVGGL 235


>tr|Q5D868|Q5D868_SPIOL DNA-directed RNA polymerase (Fragment)
            OS=Spinacia oleracea GN=NRPD1b PE=2 SV=1
          Length = 1902

 Score = 35.0 bits (79), Expect = 2.1
 Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
 Frame = -3

Query: 442  ETSRKEWNTQPGWLQRWLSVDKFSSPSGKSLALYNSQSVGSDQFPKSCFANIQCTVGSSH 263
            ++ +KE N Q  W Q+  S  K S  +  S+   NS + G     K+    +  + GS  
Sbjct: 1507 DSKKKESNVQSSWAQQGDSTWKDSKEARSSVKANNSTNSGGWSTGKALVDGVSSSWGSQK 1566

Query: 262  KD-ISPRERNLNISDGRSDRYTQASG 188
            +D   P+  + ++ DG  D+  +  G
Sbjct: 1567 EDRPQPKSNDRSVGDGNFDKDAKEEG 1592


>tr|B0DMS4|B0DMS4_LACBS Predicted protein OS=Laccaria bicolor
           (strain S238N-H82) GN=LACBIDRAFT_306386 PE=4 SV=1
          Length = 469

 Score = 35.0 bits (79), Expect = 2.1
 Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 5/91 (5%)
 Frame = -3

Query: 400 QRWLSVDKFSSPSGKSL----ALYNSQSVGSDQF-PKSCFANIQCTVGSSHKDISPRERN 236
           Q W S     S +G SL    + + +QS  +    P+  + +   T+GSSH  +  RE N
Sbjct: 239 QTWTSNTVEQSFAGSSLYPVGSRWQAQSEANTNLRPEVTWPSSSSTLGSSHSGLRRREGN 298

Query: 235 LNISDGRSDRYTQASGTHWNCGSAPLTGSRP 143
           +   +G    +TQ+  + W   +A  +G+ P
Sbjct: 299 MG-QEGWPSHHTQSQPSRWQDSAAATSGAGP 328


>tr|B8NH49|B8NH49_ASPFL Putative uncharacterized protein
            OS=Aspergillus flavus NRRL3357 GN=AFLA_132730 PE=4 SV=1
          Length = 1415

 Score = 34.3 bits (77), Expect = 3.6
 Identities = 35/127 (27%), Positives = 52/127 (40%), Gaps = 17/127 (13%)
 Frame = -3

Query: 376  FSSPSGKSLALYNSQSVGSDQFPKSCFANI-----QCTVGSS-HKDISPRERNLNISDGR 215
            ++ PSG S+A  N Q    DQ+P+  +  +        VGS  H  I     +LN+    
Sbjct: 731  YALPSGYSVAFNNQQLPRVDQYPQMAYVPVFPDQAMYGVGSDMHSGIPDMYPSLNVQGPM 790

Query: 214  SDRYTQ---------ASGTHWNCGSAPLTGSRPA-SQNFAAFRSGYLGSSIEAMAIVGS- 68
            S   T          AS    +C +A   GS  A SQ+  ++  GY   + +    VGS 
Sbjct: 791  SSMPTSGQPHLAVSTASSDFTSCSNAASAGSSSAFSQSQLSYEPGYPTFAPQVYQSVGSQ 850

Query: 67   LPGKRHP 47
             P  + P
Sbjct: 851  FPAPKQP 857


>tr|Q8DIR7|Q8DIR7_THEEB Tetrapyrrole methylase family protein
           OS=Thermosynechococcus elongatus (strain BP-1)
           GN=tlr1514 PE=4 SV=1
          Length = 281

 Score = 34.3 bits (77), Expect = 3.7
 Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 14/111 (12%)
 Frame = -1

Query: 339 IARVWVLINFPRAALQIFSAPLDLVTRTSALVKEI*IFLMEEVIGTLKLLVHIGIVALRL 160
           I ++WV +  P   L+      D+  R   ++KE+ +   E+   T +LL H GI   +L
Sbjct: 3   IGQLWV-VGTPIGNLE------DMSARALRILKEVDLIAAEDTRHTGRLLQHFGITTPQL 55

Query: 159 SL--------------GLDLQAKILLHSGVAI*GLLSRLWRLLAVCLANGI 49
           SL               L+   +I L S   + G+    + L+A C+A GI
Sbjct: 56  SLHEHNTQQRVPQLLQRLEAGQQIALVSDAGLPGVSDPGYELIAACIAGGI 106


>tr|Q4X3N8|Q4X3N8_PLACH Putative uncharacterized protein (Fragment)
           OS=Plasmodium chabaudi GN=PC101980.00.0 PE=4 SV=1
          Length = 515

 Score = 33.9 bits (76), Expect = 4.7
 Identities = 17/64 (26%), Positives = 33/64 (51%)
 Frame = -3

Query: 364 SGKSLALYNSQSVGSDQFPKSCFANIQCTVGSSHKDISPRERNLNISDGRSDRYTQASGT 185
           SGK +A Y S+    D++        + T+ SSH++   +  N+N  +  +++  + +G 
Sbjct: 26  SGKRIANYYSEKKLRDKY--------EHTIRSSHREHHSKHTNINNENNNNNKNEEPTGL 77

Query: 184 HWNC 173
            WNC
Sbjct: 78  LWNC 81


>tr|A9T8R1|A9T8R1_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_141915 PE=4 SV=1
          Length = 771

 Score = 33.5 bits (75), Expect = 6.1
 Identities = 40/114 (35%), Positives = 51/114 (44%), Gaps = 5/114 (4%)
 Frame = -3

Query: 376 FSSPSGKSLALYNS--QSVGSDQFPKSCFANIQCTVGSSHKDISPRERNLNISDGRSDRY 203
           F   SG S +L NS    V S+  P S  A I     SSH  I   E ++N+S+ RSD  
Sbjct: 393 FVKDSGGSYSLLNSIRALVFSEATPASVKARIYDL--SSHSLILVHESSMNLSEERSDHG 450

Query: 202 TQASGTHWNCGSAPL-TGSRPASQNFAAFRSGYLGSSIEAMAIVGSL--PGKRH 50
            Q   T W        +G + A Q  A   +G L  S   M IV ++  PGK H
Sbjct: 451 AQYYTTFWERERYIYNSGLKYAIQIVAESSNGSL--SYSEMRIVSAIDDPGKFH 502


>tr|A7EGT0|A7EGT0_SCLS1 Putative uncharacterized protein
           OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 /
           Ss-1) GN=SS1G_04522 PE=3 SV=1
          Length = 594

 Score = 33.5 bits (75), Expect = 6.1
 Identities = 22/87 (25%), Positives = 39/87 (44%), Gaps = 1/87 (1%)
 Frame = -3

Query: 445 NETSRKEWNTQPGWL-QRWLSVDKFSSPSGKSLALYNSQSVGSDQFPKSCFANIQCTVGS 269
           +E   + ++  PG+L  RW +V+ FS+P      ++ + ++    FP SC   I      
Sbjct: 248 SEALSQSFSATPGYLANRWNNVNLFSTPVAAQSVMFTTPAISRPVFPSSCPERIT----- 302

Query: 268 SHKDISPRERNLNISDGRSDRYTQASG 188
              D +P+ R + +S G   R     G
Sbjct: 303 --TDTTPKSR-VRLSTGLDGRAELVEG 326


>tr|B8QS85|B8QS85_9CHLA Major outer membrane protein
           OS=Chlamydophila pecorum GN=ompA PE=4 SV=1
          Length = 390

 Score = 33.1 bits (74), Expect = 8.0
 Identities = 42/146 (28%), Positives = 56/146 (38%), Gaps = 26/146 (17%)
 Frame = -3

Query: 427 EWNTQPGW--LQRWLSVDKFSSPSGKSLALYNSQSVGSDQFPKSCFANIQCTVGSSHKDI 254
           EW T  G+  L  W   D F +    S         G  +   S F N+   +G S  D+
Sbjct: 116 EWFTNAGYIALNIWDRFDVFCTLGATS---------GYFKGNSSSF-NLIGLIGISGTDL 165

Query: 253 SPRERNLNISDGRSDRYTQ--------ASGTHWNCGSAPL------TGSRPASQ------ 134
           S +  N +IS+G  + YT         A G  W CG A L        S+P  Q      
Sbjct: 166 SNKLPNASISNGVVELYTDTTFSWSIGARGALWECGCATLGAEFQYAQSKPRVQELNVLS 225

Query: 133 NFAAFR----SGYLGSSIEAMAIVGS 68
           N A F      GY+G S+    I G+
Sbjct: 226 NVAQFTVHKPQGYVGQSLPLPIIAGT 251