BP919540
Clone id YMU001_000126_C07
Library
Length 437
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000126_C07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
GAAGTGCCATACCACATTTAACAAAGAAGTTTCCAAACTGAGTATTCAGGTTGTAAAAAA
TACAAAATGATCGAAAAAGCCTCCACAGAAATGTAAAGACGGTCTAAGTCAATATATGAA
CAGTTCTCAGGTTCTTACAAGCAAGAACTGGACTAGAAAACATTTGGAGTCACAAGTCAC
TTGAACATGTGATCCAAGGTACTCATTGTGGAGATGAGTAGGCTTAAGCTTGCCAAAAGC
CACCTGAAAAGCCTCCTGCAATTCACCAGAAGCAGGCAACAAGGGCAATCACTTGTCAAG
ATCACTGCTCTTCACTGTTAAGAACAAAGTTAAATAATCAAATCTTAAGAACATGGTAGA
ATTGAACCAAGAGGAGTAAGGTGGGATCACTTCTTAACCTGTCATCGTCCCATTTCTGAC
ATGAATTTTTCATACTC
■■Homology search results ■■ -
sp_hit_id Q6ALU4
Definition sp|Q6ALU4|COBT_DESPS Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase OS=Desulfotalea psychrophila
Align length 26
Score (bit) 30.4
E-value 3.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919540|Adiantum capillus-veneris mRNA, clone:
YMU001_000126_C07.
(437 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q6ALU4|COBT_DESPS Nicotinate-nucleotide--dimethylbenzimidazol... 30 3.4
sp|Q65GD3|SYFB_BACLD Phenylalanyl-tRNA synthetase beta chain OS=... 30 5.7
sp|P40798|STC_DROME Protein shuttle craft OS=Drosophila melanoga... 29 7.5
sp|A8QA10|ATP23_MALGO Mitochondrial inner membrane protease ATP2... 29 7.5

>sp|Q6ALU4|COBT_DESPS Nicotinate-nucleotide--dimethylbenzimidazole
phosphoribosyltransferase OS=Desulfotalea psychrophila
GN=cobT PE=3 SV=1
Length = 355

Score = 30.4 bits (67), Expect = 3.4
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +1

Query: 352 HGRIEPRGVRWDHFLTCHRPISDMNF 429
H +EP V FL C RP+ D+NF
Sbjct: 292 HRSVEPGHVHMQEFLGCKRPLLDLNF 317


>sp|Q65GD3|SYFB_BACLD Phenylalanyl-tRNA synthetase beta chain
OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580)
GN=pheT PE=3 SV=1
Length = 804

Score = 29.6 bits (65), Expect = 5.7
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = -3

Query: 270 SGELQEAFQVAFGK-LKPTHLHNEYLGSHVQVTCDSKCFLVQFL 142
+G+L++ + A GK LK H+ + Y G H++ S F +Q+L
Sbjct: 729 AGQLEDVIKTAGGKWLKEVHVFDVYEGEHMEEGKKSVAFSLQYL 772


>sp|P40798|STC_DROME Protein shuttle craft OS=Drosophila
melanogaster GN=stc PE=1 SV=2
Length = 1106

Score = 29.3 bits (64), Expect = 7.5
Identities = 15/46 (32%), Positives = 19/46 (41%)
Frame = +3

Query: 183 EHVIQGTHCGDE*A*ACQKPPEKPPAIHQKQATRAITCQDHCSSLL 320
E V+Q HCG K K P + Q R +C+D C L
Sbjct: 546 EQVVQQCHCG--------KQERKVPCTRESQDKRTYSCKDSCGQPL 583


>sp|A8QA10|ATP23_MALGO Mitochondrial inner membrane protease ATP23
OS=Malassezia globosa (strain ATCC 96807 / CBS 7966)
GN=ATP23 PE=3 SV=1
Length = 246

Score = 29.3 bits (64), Expect = 7.5
Identities = 16/62 (25%), Positives = 33/62 (53%)
Frame = -2

Query: 430 KNSCQKWDDDRLRSDPTLLLLVQFYHVLKI*LFNFVLNSEEQ*S*QVIALVACFW*IAGG 251
+ C++W +D LR+ P + +V+ +++ + +S Q + + + +C IAGG
Sbjct: 51 RGRCEQWKEDLLRTSPMVRFMVKHLTLIQCNPLSPREDSASQGTPPKLLIASCPPDIAGG 110

Query: 250 FS 245
FS
Sbjct: 111 FS 112


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919540|Adiantum capillus-veneris mRNA, clone:
YMU001_000126_C07.
(437 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******