BP919542 |
Clone id |
YMU001_000126_C10 |
Library |
YMU01 |
Length |
420 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000126_C10. |
Accession |
BP919542 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
CCGCTGCAGCCAGAGCCTAAGCTGTGTAGGACAGGAAATAGGGGGCTCTGAGTGCTTGGA ACCCATACCCAATGCCAAAGACATGTAGAGAAAATTTGTTTCTCAATCAGAATTAGTCTT TCTGCATTTAGTGGGAGGGGGTGCCCACCACACAATCTTGTAATAACTTTCATTGCAAAC AGTGGGAACTTTGCATTGTCGTCGGAGTATTCCTTGTGGTATATTATGATCTACAAAAAT ATAGTAATGAATTTATGGGCCATAAGTGAGATGGGTATTATTGCCAAGTACTTGATTTCC CTACAAACCTTTTTGTGGTTGAAACGCCCAATGTAGTGAGACAACACCGCATCCTTGCCT TGGACTCCAGTGACAAGCCCTTGCCGTGAGCCTCCCGCTCTTCTAAGGAAACTATCATCA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q7S4Z3 |
Definition |
sp|Q7S4Z3|GPI14_NEUCR GPI mannosyltransferase 1 OS=Neurospora crassa |
Align length |
89 |
Score (bit) |
33.1 |
E-value |
0.46 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP919542|Adiantum capillus-veneris mRNA, clone: YMU001_000126_C10. (420 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q7S4Z3|GPI14_NEUCR GPI mannosyltransferase 1 OS=Neurospora cr... 33 0.46 sp|Q91ZC5|MRGA7_MOUSE Mas-related G-protein coupled receptor mem... 32 1.3 sp|Q9P6R5|GPI14_SCHPO GPI mannosyltransferase 1 OS=Schizosacchar... 32 1.3 sp|Q8NE79|POPD1_HUMAN Blood vessel epicardial substance OS=Homo ... 31 1.7 sp|A8GUT7|PPNK_RICB8 Probable inorganic polyphosphate/ATP-NAD ki... 31 2.2 sp|Q0ZIX1|NU5C_VITVI NAD(P)H-quinone oxidoreductase subunit 5, c... 30 2.9 sp|Q61062|DVL3_MOUSE Segment polarity protein dishevelled homolo... 30 4.9 sp|Q30D77|COOA1_MOUSE Collagen alpha-1(XXIV) chain OS=Mus muscul... 30 4.9 sp|Q92997|DVL3_HUMAN Segment polarity protein dishevelled homolo... 29 6.4 sp|Q8ER78|CTAA_OCEIH Heme A synthase OS=Oceanobacillus iheyensis... 29 6.4 sp|A4QJP7|NU5C_AETGR NAD(P)H-quinone oxidoreductase subunit 5, c... 29 8.4
>sp|Q7S4Z3|GPI14_NEUCR GPI mannosyltransferase 1 OS=Neurospora crassa GN=gpi-14 PE=3 SV=1 Length = 487
Score = 33.1 bits (74), Expect = 0.46 Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 8/89 (8%) Frame = +1
Query: 85 VEKICFSIRISLSAF------SGRGCPPHNLVITFIANSGNFALSSEYSLWYIMIYKNIV 246 +E + F ++ LS + + P L TF + N +S+Y LWY+++ + Sbjct: 359 IESLAFLPQLVLSTILIPLTLAKKDLPTSLLAQTFAFVTFNKVCTSQYFLWYLVLLPLYL 418
Query: 247 --MNLWAISEMGIIAKYLISLQTFLWLKR 327 + W MG++A L L LWL++ Sbjct: 419 PRSSFWTSKRMGLVALGLWVLGQALWLQQ 447
>sp|Q91ZC5|MRGA7_MOUSE Mas-related G-protein coupled receptor member A7 OS=Mus musculus GN=Mrgpra7 PE=2 SV=1 Length = 305
Score = 31.6 bits (70), Expect = 1.3 Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 6/50 (12%) Frame = +3
Query: 168 FHCKQWE-----LCIVVGVFLVVYYDLQKYSNEFMGHK*DGYY-CQVLDF 299 +HC++ E +C V+ +F V+ L++Y +F G K YY CQ +F Sbjct: 119 YHCRRPEHTSTVMCAVIWIFSVLICILKEYFCDFFGTKLGNYYVCQASNF 168
>sp|Q9P6R5|GPI14_SCHPO GPI mannosyltransferase 1 OS=Schizosaccharomyces pombe GN=gpi14 PE=2 SV=2 Length = 371
Score = 31.6 bits (70), Expect = 1.3 Identities = 17/65 (26%), Positives = 30/65 (46%) Frame = +1
Query: 127 FSGRGCPPHNLVITFIANSGNFALSSEYSLWYIMIYKNIVMNLWAISEMGIIAKYLISLQ 306 F + P TF + N +S+Y +WY++ ++ N +S+ G+I L + Sbjct: 268 FGKKNLPGTLFAQTFAFVTFNKVCTSQYFMWYLVFLPLVLPNSKLLSKKGLICLSLWIIG 327
Query: 307 TFLWL 321 LWL Sbjct: 328 QLLWL 332
>sp|Q8NE79|POPD1_HUMAN Blood vessel epicardial substance OS=Homo sapiens GN=BVES PE=2 SV=1 Length = 360
Score = 31.2 bits (69), Expect = 1.7 Identities = 27/113 (23%), Positives = 48/113 (42%), Gaps = 1/113 (0%) Frame = +1
Query: 82 HVEKICFSIRISLSAFSGRGCPPHNLVITFIANSGNFALSSE-YSLWYIMIYKNIVMNLW 258 HV ICF++ + + P L + I G L Y +W + + + +W Sbjct: 46 HVANICFAVGLVI---------PTTLHLHMIFLRGMLTLGCTLYIVWATLYRCALDIMIW 96
Query: 259 AISEMGIIAKYLISLQTFLWLKRPM**DNTASLPWTPVTSPCREPPALLRKLS 417 +G+ ++ L L+ KRP+ + S + + P R PP L R+L+ Sbjct: 97 NSVFLGV---NILHLSYLLYKKRPVKIEKELSGMYRRLFEPLRVPPDLFRRLT 146
>sp|A8GUT7|PPNK_RICB8 Probable inorganic polyphosphate/ATP-NAD kinase OS=Rickettsia bellii (strain OSU 85-389) GN=ppnK PE=3 SV=1 Length = 255
Score = 30.8 bits (68), Expect = 2.2 Identities = 16/43 (37%), Positives = 22/43 (51%) Frame = -2
Query: 149 GGHPLPLNAERLILIEKQIFSTCLWHWVWVPSTQSPLFPVLHS 21 GGH LPL + L L F WH +PS+ S F +L++ Sbjct: 162 GGHILPLESNMLCLTPICSFRPRRWHGALLPSSASIKFEILNT 204
>sp|Q0ZIX1|NU5C_VITVI NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic OS=Vitis vinifera GN=ndhF PE=3 SV=1 Length = 749
Score = 30.4 bits (67), Expect = 2.9 Identities = 13/35 (37%), Positives = 20/35 (57%) Frame = -2
Query: 218 HKEYSDDNAKFPLFAMKVITRLCGGHPLPLNAERL 114 + + SD+ FPLFA+ + T G +P N ER+ Sbjct: 544 YPQESDNTMLFPLFALALFTLFVGAIGIPFNQERM 578
>sp|Q61062|DVL3_MOUSE Segment polarity protein dishevelled homolog DVL-3 OS=Mus musculus GN=Dvl3 PE=1 SV=1 Length = 716
Score = 29.6 bits (65), Expect = 4.9 Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 3/34 (8%) Frame = -2
Query: 224 IYHKEYSDDNAKFPLFAMKVITRLC---GGHPLP 132 + +E SDDNAK P F +V++ L G HP P Sbjct: 55 VVKEEISDDNAKLPCFNGRVVSWLVSAEGSHPEP 88
>sp|Q30D77|COOA1_MOUSE Collagen alpha-1(XXIV) chain OS=Mus musculus GN=Col24a1 PE=2 SV=1 Length = 1733
Score = 29.6 bits (65), Expect = 4.9 Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 1/54 (1%) Frame = +2
Query: 41 GGSECLEPIPNAKDM*RKF-VSQSELVFLHLVGGGAHHTIL**LSLQTVGTLHC 199 GG CL P+ K +F VS+ ++ FLHL+ A HTI T+HC Sbjct: 1601 GGQTCLSPVSVTK---LEFGVSKVQMNFLHLLSSEATHTI----------TIHC 1641
>sp|Q92997|DVL3_HUMAN Segment polarity protein dishevelled homolog DVL-3 OS=Homo sapiens GN=DVL3 PE=1 SV=2 Length = 716
Score = 29.3 bits (64), Expect = 6.4 Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 3/34 (8%) Frame = -2
Query: 224 IYHKEYSDDNAKFPLFAMKVITRLC---GGHPLP 132 + +E SDDNAK P F +V++ L G HP P Sbjct: 55 VVKEEISDDNAKLPCFNGRVVSWLVSAEGSHPDP 88
>sp|Q8ER78|CTAA_OCEIH Heme A synthase OS=Oceanobacillus iheyensis GN=ctaA PE=3 SV=1 Length = 309
Score = 29.3 bits (64), Expect = 6.4 Identities = 15/63 (23%), Positives = 29/63 (46%) Frame = +3
Query: 78 KTCRENLFLNQN*SFCI*WEGVPTTQSCNNFHCKQWELCIVVGVFLVVYYDLQKYSNEFM 257 KT R ++ + C+ + G + +N C+ W LC+ F + Y+ ++ M Sbjct: 157 KTHRIEIYAISFYTMCVVYSGALVRHTDSNLACRDWPLCVNNSSFGISDYNFYQWVQ--M 214
Query: 258 GHK 266 GH+ Sbjct: 215 GHR 217
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A2QB90 |
Definition |
tr|A2QB90|A2QB90_ASPNC Contig An01c0460, complete genome OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) |
Align length |
77 |
Score (bit) |
35.0 |
E-value |
1.9 |
Report |
|