BP919546 |
Clone id |
YMU001_000126_D02 |
Library |
YMU01 |
Length |
590 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000126_D02. |
Accession |
BP919546 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL3120Contig1 |
Sequence |
GGTTAATTCAACTTGATAGCTCAGCTTTTGACTTCAATACAACAAATTTTGTAAGTTCCA AAGGGGGACCATACTGGCCCTCACGCAAAGCTCAATAAAGACTGCTACAGGGTGACGACA CCCCATGCCCATATCCAAGCAAAGGTGCCTGAAAAAGCATATAGAAGACAATTTCAGCAT CAAAGCTACATATTGAATAAGGTGCAATATGCTACATCAGGGTAAAAATCCCCGAGCAAA AGATGTAGTCTCCAAGCTGAAGGACCCCTGGAATTACACTTCATATTCCAGCAATTCTAA AAGGGGCCCAGATAAGCTGAGTATCCAGGTTCACATTAATTCTGCAATCATGCATGCAAG GCATTGTCACTTACTATGTGCCCCTTCACCATTTCACACTTGCACAAGCGATGTGCCTGC AATTTTCAAATACTGCATAACCTTCTCTGCTACTTGATTAATTTCCTCCTCTCTCTCCTT GAGCAGCTCTTGAAAGGCATCTTCTGCATTGGTTTCAGGATCTGTATCAACTGCCTCCTT AAAATACGCATCAACCTTGACGACGCCATTACTCCCATTGCCTGGAGGAG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q7RAV5 |
Definition |
sp|Q7RAV5|CDPK3_PLAYO Calcium-dependent protein kinase 3 OS=Plasmodium yoelii yoelii |
Align length |
76 |
Score (bit) |
32.7 |
E-value |
1.4 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A3TZ18 |
Definition |
tr|A3TZ18|A3TZ18_9RHOB ATP-dependent metalloprotease FtsH OS=Oceanicola batsensis HTCC2597 |
Align length |
74 |
Score (bit) |
43.5 |
E-value |
0.009 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP919546|Adiantum capillus-veneris mRNA, clone: YMU001_000126_D02. (590 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A3TZ18|A3TZ18_9RHOB ATP-dependent metalloprotease FtsH OS=Oce... 44 0.009 tr|B5UY14|B5UY14_BACCE Putative uncharacterized protein OS=Bacil... 35 2.4 tr|A5C8W4|A5C8W4_VITVI Putative uncharacterized protein OS=Vitis... 35 2.4 tr|Q167Z2|Q167Z2_ROSDO Cell division protein FtsH OS=Roseobacter... 35 4.1 tr|Q4KD79|Q4KD79_PSEF5 Thermolabile hemolysin VCA0218 , putative... 34 7.1 tr|A5BYH2|A5BYH2_VITVI Putative uncharacterized protein OS=Vitis... 34 7.1 tr|A5B4K9|A5B4K9_VITVI Putative uncharacterized protein OS=Vitis... 34 7.1 tr|A1BHP1|A1BHP1_CHLPD Ste24 endopeptidase OS=Chlorobium phaeoba... 33 9.2 tr|A9HBC8|A9HBC8_9RHOB Cell division protein FtsH OS=Roseobacter... 33 9.2
>tr|A3TZ18|A3TZ18_9RHOB ATP-dependent metalloprotease FtsH OS=Oceanicola batsensis HTCC2597 GN=OB2597_15680 PE=4 SV=1 Length = 639
Score = 43.5 bits (101), Expect = 0.009 Identities = 24/74 (32%), Positives = 45/74 (60%), Gaps = 3/74 (4%) Frame = -3
Query: 582 GNGSNGVVKVDAYFKEAVDTDPETNAEDAFQ---ELLKEREEEINQVAEKVMQYLKIAGT 412 GNG+ G V A+ KE ++ + + EDA+ ++L ER+EE ++A+ +++Y + G Sbjct: 529 GNGAGGF-SVSAHTKELIEEEVKRMIEDAYNHAYKILTERQEEWERLAQGLLEYETLTGD 587
Query: 411 SLVQV*NGEGAHSK 370 + +V NGE +S+ Sbjct: 588 EIKRVMNGEPPNSE 601
>tr|B5UY14|B5UY14_BACCE Putative uncharacterized protein OS=Bacillus cereus AH1134 GN=BCAH1134_C0389 PE=4 SV=1 Length = 180
Score = 35.4 bits (80), Expect = 2.4 Identities = 26/83 (31%), Positives = 35/83 (42%), Gaps = 12/83 (14%) Frame = +2
Query: 167 DNFSIKATY*IRCNMLHQGKN------------PRAKDVVSKLKDPWNYTSYSSNSKRGP 310 D F A Y +RCN LH G + +KD V +L D TSYS + + Sbjct: 67 DRFDGDAVYKLRCNFLHDGSSDIREYMRGKYNQTVSKDFVFELTD--TMTSYSKSWENNE 124
Query: 311 DKLSIQVHINSAIMHARHCHLLC 379 D SI++ I CH +C Sbjct: 125 DDCSIRIEIGV----IDFCHKMC 143
>tr|A5C8W4|A5C8W4_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_010107 PE=4 SV=1 Length = 604
Score = 35.4 bits (80), Expect = 2.4 Identities = 26/96 (27%), Positives = 41/96 (42%) Frame = +2
Query: 116 RHPMPISKQRCLKKHIEDNFSIKATY*IRCNMLHQGKNPRAKDVVSKLKDPWNYTSYSSN 295 R P I + +KKH+ F ++A Y QGKN R K V ++ P +++ Sbjct: 401 REPQRIVIKEEMKKHMPPPF-LQALYGKIIQTKSQGKN-RGKTGVCEISQPLRNRHFAAK 458
Query: 296 SKRGPDKLSIQVHINSAIMHARHCHLLCAPSPFHTC 403 R P LS ++ + + A CH F +C Sbjct: 459 PVRSPIALSAKIFAAAKPILAHECHFAAQEPSFGSC 494
>tr|Q167Z2|Q167Z2_ROSDO Cell division protein FtsH OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=ftsH PE=4 SV=1 Length = 641
Score = 34.7 bits (78), Expect = 4.1 Identities = 17/67 (25%), Positives = 37/67 (55%), Gaps = 3/67 (4%) Frame = -3
Query: 576 GSNGVVKVDAYFKEAVDTDPETNAEDAFQ---ELLKEREEEINQVAEKVMQYLKIAGTSL 406 G+ V A KE ++ + + +D ++ +++KE E E ++A+ +++Y + G + Sbjct: 529 GNTAGFSVSANTKELIEEEVQRFIQDGYEWASKIIKENEVEFERLAQGLLEYETLTGEEI 588
Query: 405 VQV*NGE 385 +V NGE Sbjct: 589 KRVMNGE 595
>tr|Q4KD79|Q4KD79_PSEF5 Thermolabile hemolysin VCA0218 , putative OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=PFL_2697 PE=4 SV=1 Length = 304
Score = 33.9 bits (76), Expect = 7.1 Identities = 14/51 (27%), Positives = 28/51 (54%) Frame = +3
Query: 282 HIPAILKGAQIS*VSRFTLILQSCMQGIVTYYVPLHHFTLAQAMCLQFSNT 434 H+PA+++G Q+ +++ IL+ + ++ HH ++ L FSNT Sbjct: 192 HVPAVVQGNQVKNATQYQQILEQKLPAVLATLANAHHVSIGYFDHLAFSNT 242
>tr|A5BYH2|A5BYH2_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_035125 PE=4 SV=1 Length = 575
Score = 33.9 bits (76), Expect = 7.1 Identities = 24/91 (26%), Positives = 38/91 (41%) Frame = +2
Query: 131 ISKQRCLKKHIEDNFSIKATY*IRCNMLHQGKNPRAKDVVSKLKDPWNYTSYSSNSKRGP 310 + K+ +KKH+ F ++A Y QGKN R K V ++ P ++ R Sbjct: 281 VIKKELMKKHMPPPF-LQALYDKIIQRKPQGKN-RGKTGVCEISQPLRNRHFAVKPVRSL 338
Query: 311 DKLSIQVHINSAIMHARHCHLLCAPSPFHTC 403 LS ++ + A CH PF +C Sbjct: 339 KPLSTKIFAAAKPSLAHECHFAAQEPPFRSC 369
>tr|A5B4K9|A5B4K9_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_006036 PE=4 SV=1 Length = 866
Score = 33.9 bits (76), Expect = 7.1 Identities = 19/64 (29%), Positives = 28/64 (43%) Frame = +2
Query: 218 QGKNPRAKDVVSKLKDPWNYTSYSSNSKRGPDKLSIQVHINSAIMHARHCHLLCAPSPFH 397 QGKN R K V ++ P +++ R P LS ++ + A CH PF Sbjct: 621 QGKN-RGKTGVCEISQPLRNRHFAAKPVRSPIALSAKIFAAAKPSLAHECHFAAQEPPFR 679
Query: 398 TCTS 409 +C S Sbjct: 680 SCES 683
>tr|A1BHP1|A1BHP1_CHLPD Ste24 endopeptidase OS=Chlorobium phaeobacteroides (strain DSM 266) GN=Cpha266_1902 PE=3 SV=1 Length = 419
Score = 33.5 bits (75), Expect = 9.2 Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 2/35 (5%) Frame = -1
Query: 167 LLYAF--SGTFAWIWAWGVVTL*QSLLSFA*GPVW 69 LL+ F +G F W+WAWG +TL LL + P W Sbjct: 162 LLWFFEQAGPFGWLWAWGGLTLFTLLLQYV-APAW 195
>tr|A9HBC8|A9HBC8_9RHOB Cell division protein FtsH OS=Roseobacter litoralis Och 149 GN=RLO149_17778 PE=4 SV=1 Length = 624
Score = 33.5 bits (75), Expect = 9.2 Identities = 16/67 (23%), Positives = 37/67 (55%), Gaps = 3/67 (4%) Frame = -3
Query: 576 GSNGVVKVDAYFKEAVDTDPETNAEDAFQ---ELLKEREEEINQVAEKVMQYLKIAGTSL 406 G+ V A KE ++ + + +D ++ +++KE E E ++A+ +++Y + G + Sbjct: 514 GNTAGFSVSANTKELIEEEVQRFIQDGYESASKIIKENEVEFERLAQGLLEYETLTGEEI 573
Query: 405 VQV*NGE 385 +V NG+ Sbjct: 574 KRVMNGD 580
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