| BP919550 |
| Clone id |
YMU001_000126_D06 |
| Library |
YMU01 |
| Length |
366 |
| Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000126_D06. |
| Accession |
BP919550 |
| Tissue type |
prothallium |
| Developmental stage |
- |
| Contig ID |
CL1553Contig1 |
| Sequence |
GGCCGCACTCCTGCCCAAACCCAAGGCTTGTTGATATAGAAGACCACAAGCTAACCTGAT CATAGCCACCACATGCTCTAACTTGAAAAGAGAGCTGAACAAGGTCCACCTCTTTCCCTT TAACGAGAACAGGAATTGGTCTAGTCTCAACTAAGTGCCGAACCTCAAAGGCCTCAATGA CAGTCTTTATAAGGTCATCCTCCTGAATGTCCATCTCCTCAGGTAACTCGTCTGCTTGAG TAAGATTACCTGCTAAAAGGCCACCATCCCCTTCTTCAGTCTTGTCACCTGTCATTTCTA CATCCTTGCCCTCCACAGGGACTGTCATTTGATTGTCATTCGTATCCCCTCCTACTTGTT GACAAA |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
Q1LKN9 |
| Definition |
sp|Q1LKN9|UVRC_RALME UvrABC system protein C OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) |
| Align length |
77 |
| Score (bit) |
32.7 |
| E-value |
0.58 |
| Report |
 |
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
A9TW59 |
| Definition |
tr|A9TW59|A9TW59_PHYPA ARID/BRIGHT DNA-binding domain-containing protein OS=Physcomitrella patens subsp. patens |
| Align length |
111 |
| Score (bit) |
54.7 |
| E-value |
2.0e-06 |
| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP919550|Adiantum capillus-veneris mRNA, clone: YMU001_000126_D06. (366 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9TW59|A9TW59_PHYPA ARID/BRIGHT DNA-binding domain-containing... 55 2e-06 tr|A9RMF8|A9RMF8_PHYPA ARID/BRIGHT DNA-binding domain-containing... 54 4e-06 tr|B7F182|B7F182_ORYSJ cDNA clone:002-142-B09, full insert seque... 38 0.29 tr|A3R6T2|A3R6T2_PLAFA Erythrocyte membrane protein 1 (Fragment)... 36 0.84 tr|Q7XXA3|Q7XXA3_ORYSJ Os04g0166400 protein OS=Oryza sativa subs... 36 1.1 tr|Q01HC2|Q01HC2_ORYSA OSIGBa0136O08-OSIGBa0153H12.2 protein OS=... 36 1.1 tr|A2XQA2|A2XQA2_ORYSI Putative uncharacterized protein OS=Oryza... 36 1.1 tr|Q0H0R7|Q0H0R7_9PEZI Polyketide synthase OS=Ophiostoma piceae ... 36 1.1 tr|B6KXH7|B6KXH7_BRAFL Putative uncharacterized protein OS=Branc... 35 1.4 tr|A3C582|A3C582_ORYSJ Putative uncharacterized protein OS=Oryza... 35 1.9 tr|A7QNL5|A7QNL5_VITVI Chromosome chr2 scaffold_132, whole genom... 34 3.2 tr|A8Q8K3|A8Q8K3_MALGO Putative uncharacterized protein OS=Malas... 34 3.2 tr|Q8ZYZ9|Q8ZYZ9_PYRAE PaREP1 OS=Pyrobaculum aerophilum GN=PAE05... 34 3.2 tr|A3Z525|A3Z525_9SYNE Putative uncharacterized protein OS=Synec... 34 4.2 tr|Q9LDD4|Q9LDD4_ARATH Putative uncharacterized protein AT4g1140... 34 4.2 tr|Q1PEA0|Q1PEA0_ARATH ARID/BRIGHT DNA-binding domain-containing... 34 4.2 tr|B0EM67|B0EM67_ENTDI Putative uncharacterized protein OS=Entam... 34 4.2 tr|A5K9R5|A5K9R5_PLAVI Bromodomain protein, putative OS=Plasmodi... 34 4.2 tr|A9L2Q3|A9L2Q3_SHEB9 Putative uncharacterized protein OS=Shewa... 33 5.5 tr|A6WJU0|A6WJU0_SHEB8 Putative uncharacterized protein OS=Shewa... 33 5.5 tr|A3D825|A3D825_SHEB5 Putative uncharacterized protein OS=Shewa... 33 5.5 tr|A7EC25|A7EC25_SCLS1 Putative uncharacterized protein OS=Scler... 33 7.1 tr|B5S413|B5S413_RALSO Putative uncharacterized protein OS=Ralst... 33 9.3 tr|Q711Q1|Q711Q1_OSTOS Heat shock protein 20 OS=Ostertagia oster... 33 9.3 tr|B0EKD1|B0EKD1_ENTDI Putative uncharacterized protein OS=Entam... 33 9.3
>tr|A9TW59|A9TW59_PHYPA ARID/BRIGHT DNA-binding domain-containing protein OS=Physcomitrella patens subsp. patens GN=ARID1506 PE=4 SV=1 Length = 982
Score = 54.7 bits (130), Expect = 2e-06 Identities = 39/111 (35%), Positives = 55/111 (49%), Gaps = 9/111 (8%) Frame = -3
Query: 307 KDVEMTGDKTEEGDGGLLAGNLTQADELPE-EMDIQEDD-----LIKTVIEAFEVRHLVE 146 K+VE E GG LT +++ E D ED L+ T E R Sbjct: 13 KEVEAEESGEVELGGGEKRSKLTASEDFDVGESDEDEDSRMGVLLLNTASRILEARR--R 70
Query: 145 TRPIPVLVKGKEVDLVQLSFQVRACGGYDQVS---LWSSISTSLGFGQECG 2 TRP+PVL+ K VDL+ L +V + GGY +V+ LW ++S +L G +CG Sbjct: 71 TRPLPVLMGDKAVDLLALHSRVSSMGGYSKVTEAGLWGAVSDALELGLDCG 121
>tr|A9RMF8|A9RMF8_PHYPA ARID/BRIGHT DNA-binding domain-containing protein OS=Physcomitrella patens subsp. patens GN=ARID1505 PE=4 SV=1 Length = 844
Score = 53.9 bits (128), Expect = 4e-06 Identities = 41/119 (34%), Positives = 57/119 (47%), Gaps = 4/119 (3%) Frame = -3
Query: 346 DTNDNQMTVPVEGK-DVEMTGDKTEEGDGGLLAGNLTQADELPEEMDIQEDDLIKTVIEA 170 D + + V VE +VE G + L+ + DE +E L+ TV Sbjct: 7 DMKNKRKEVEVEDAGEVESGGAEKRSKPNALIELGGRERDE--DETSSSGGSLLNTVQRI 64
Query: 169 FEVRHLVETRPIPVLVKGKEVDLVQLSFQVRACGGYDQVS---LWSSISTSLGFGQECG 2 E R RP+PVL+ K VDL L +V + GGY +V+ +WS IS +LG G ECG Sbjct: 65 LEARK--RFRPLPVLMGDKVVDLSALHSRVNSMGGYSKVTEAGMWSVISDALGLGLECG 121
>tr|B7F182|B7F182_ORYSJ cDNA clone:002-142-B09, full insert sequence OS=Oryza sativa subsp. japonica PE=2 SV=1 Length = 289
Score = 37.7 bits (86), Expect = 0.29 Identities = 25/86 (29%), Positives = 46/86 (53%), Gaps = 5/86 (5%) Frame = -3
Query: 262 GLLAGNLTQADELPEEMDIQEDDLIKTVIEAFEVRH----LVETRPIPVLV-KGKEVDLV 98 G LAG + LPE+ + ++ + ++ +F + ++ RP+P L+ G V L+ Sbjct: 73 GYLAGQELPSITLPED---RAPEVFERLLGSFLAQSHGPGVLPPRPMPPLLGDGTPVGLL 129
Query: 97 QLSFQVRACGGYDQVSLWSSISTSLG 20 +L VRACGG++ V W++ + G Sbjct: 130 RLYLAVRACGGFEAVRSWAAAAEMAG 155
>tr|A3R6T2|A3R6T2_PLAFA Erythrocyte membrane protein 1 (Fragment) OS=Plasmodium falciparum GN=IT4_var30 PE=4 SV=1 Length = 1135
Score = 36.2 bits (82), Expect = 0.84 Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 2/63 (3%) Frame = -3
Query: 325 TVPVEGKDVEMTGDKTEEGDGGLLAGNL--TQADELPEEMDIQEDDLIKTVIEAFEVRHL 152 T P E +D E ++ +E + G G T A+ LP+E ++ E+ + KT + EV + Sbjct: 675 TAPTEEEDEEEEEEEEDEDEDGDEVGGEEETAAEALPDETEVVEETVAKTTTPSVEVCKI 734
Query: 151 VET 143 VET Sbjct: 735 VET 737
>tr|Q7XXA3|Q7XXA3_ORYSJ Os04g0166400 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0019G23.13 PE=2 SV=2 Length = 538
Score = 35.8 bits (81), Expect = 1.1 Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 9/67 (13%) Frame = -3
Query: 196 DLIKTVIEAFEVRHLV----ETRPIPV-LVKGKEVDLVQLSFQVRACGGYDQVS----LW 44 DL TV+ AF +R + E RP+P L G VDL++L +RA GGY S +W Sbjct: 36 DLFDTVLAAF-LREVYPGGREVRPLPAKLGDGSRVDLLRLFSAIRAAGGYAATSSSPAVW 94
Query: 43 SSISTSL 23 +S + S+ Sbjct: 95 ASAAESV 101
>tr|Q01HC2|Q01HC2_ORYSA OSIGBa0136O08-OSIGBa0153H12.2 protein OS=Oryza sativa GN=OSIGBa0136O08-OSIGBa0153H12.2 PE=4 SV=1 Length = 538
Score = 35.8 bits (81), Expect = 1.1 Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 9/67 (13%) Frame = -3
Query: 196 DLIKTVIEAFEVRHLV----ETRPIPV-LVKGKEVDLVQLSFQVRACGGYDQVS----LW 44 DL TV+ AF +R + E RP+P L G VDL++L +RA GGY S +W Sbjct: 36 DLFDTVLAAF-LREVYPGGREVRPLPAKLGDGSRVDLLRLFSAIRAAGGYAATSSSPAVW 94
Query: 43 SSISTSL 23 +S + S+ Sbjct: 95 ASAAESV 101
>tr|A2XQA2|A2XQA2_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_14810 PE=4 SV=1 Length = 538
Score = 35.8 bits (81), Expect = 1.1 Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 9/67 (13%) Frame = -3
Query: 196 DLIKTVIEAFEVRHLV----ETRPIPV-LVKGKEVDLVQLSFQVRACGGYDQVS----LW 44 DL TV+ AF +R + E RP+P L G VDL++L +RA GGY S +W Sbjct: 36 DLFDTVLAAF-LREVYPGGREVRPLPAKLGDGSRVDLLRLFSAIRAAGGYAATSSSPAVW 94
Query: 43 SSISTSL 23 +S + S+ Sbjct: 95 ASAAESV 101
>tr|Q0H0R7|Q0H0R7_9PEZI Polyketide synthase OS=Ophiostoma piceae GN=TOPA45 PE=4 SV=2 Length = 2180
Score = 35.8 bits (81), Expect = 1.1 Identities = 18/57 (31%), Positives = 28/57 (49%) Frame = -3
Query: 358 QVGGDTNDNQMTVPVEGKDVEMTGDKTEEGDGGLLAGNLTQADELPEEMDIQEDDLI 188 + G +D+ +T P+E D D E GGL A LT + EEM + D+++ Sbjct: 1757 ETDGMKSDSAVTTPMEESDTGSIKDGGEVSAGGLTAHQLTVRTTIAEEMQVDVDEIV 1813
>tr|B6KXH7|B6KXH7_BRAFL Putative uncharacterized protein OS=Branchiostoma floridae GN=BRAFLDRAFT_63599 PE=4 SV=1 Length = 580
Score = 35.4 bits (80), Expect = 1.4 Identities = 28/72 (38%), Positives = 40/72 (55%), Gaps = 2/72 (2%) Frame = -3
Query: 319 PVEGKDVEMTGDKTE--EGDGGLLAGNLTQADELPEEMDIQEDDLIKTVIEAFEVRHLVE 146 P+EG E GD+ E E D + +G+ + +E +EMD +ED+ IK V E+ +L E Sbjct: 435 PMEGAMEEEEGDEEEDSEEDEEMSSGDGEEEEE-NDEMDEEEDEFIKPVPES----NLAE 489
Query: 145 TRPIPVLVKGKE 110 I V VK KE Sbjct: 490 LGTISVNVKAKE 501
>tr|A3C582|A3C582_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_030454 PE=4 SV=1 Length = 305
Score = 35.0 bits (79), Expect = 1.9 Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 1/42 (2%) Frame = -3
Query: 142 RPIPVLV-KGKEVDLVQLSFQVRACGGYDQVSLWSSISTSLG 20 RP+P L+ G V L++L VRACGG++ V W++ + G Sbjct: 115 RPMPPLLGDGTPVGLLRLYLAVRACGGFEAVRSWAAAAEMAG 156
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