BP919553 |
Clone id |
YMU001_000126_D09 |
Library |
YMU01 |
Length |
479 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000126_D09. |
Accession |
BP919553 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
ATGTTCTTCTTATCCTCTTAAATTCCTGCTCAGTCCAATCATCCTACTTCTGCAGATTAT TTCAGTAGCGACCTATCAAGAGCCATTCATCCTCATATAGTTCCTCTGCAAAGGACTCAA GTGAAGACACAAAACATGCATGACTACTCTTTGAATGATCAATAGTGTAAAACTTTGTGC CAAAATCATCTCCCTCAATAATCATGTCCTGTTCATCTTCATACATTGCCCTAGATAGCA TATCTGCCATTGGATTGTCTTTCCCTGCAATATGCTTGAACTCAGGATTCAAGGACTTTA TGTAGGCTATCCATTACATCATTGCAATATCAGGAGTCAAACAGTTTGTGATCATTCCAA GAAGAGGCAAACAATTAGTTTCCACAACCACTGATGCCCCTTTCAAGTACTCCTTGTCAC ACCTCAAAGCTATAACCACCCCCCATAGTACCCTTTTTACTTGTGCATAATCACGTTGG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P04323 |
Definition |
sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster |
Align length |
86 |
Score (bit) |
38.1 |
E-value |
0.021 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SEB1 |
Definition |
tr|A9SEB1|A9SEB1_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens |
Align length |
75 |
Score (bit) |
108.0 |
E-value |
1.0e-22 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP919553|Adiantum capillus-veneris mRNA, clone: YMU001_000126_D09. (479 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9SEB1|A9SEB1_PHYPA Predicted protein (Fragment) OS=Physcomit... 108 1e-22 tr|Q9C0U1|Q9C0U1_YARLI YALI0A10395p OS=Yarrowia lipolytica GN=ta... 53 9e-06 tr|Q6CHG3|Q6CHG3_YARLI YALI0A08932p OS=Yarrowia lipolytica GN=YA... 53 9e-06 tr|Q6CFJ9|Q6CFJ9_YARLI YALI0B06303p OS=Yarrowia lipolytica GN=YA... 53 9e-06 tr|Q6CFJ4|Q6CFJ4_YARLI YALI0B06446p OS=Yarrowia lipolytica GN=YA... 53 9e-06 tr|Q6C613|Q6C613_YARLI YALI0E13376p OS=Yarrowia lipolytica GN=YA... 53 9e-06 tr|Q6C3G7|Q6C3G7_YARLI YALI0E34980p OS=Yarrowia lipolytica GN=YA... 53 9e-06 tr|A6SHV6|A6SHV6_BOTFB Putative uncharacterized protein OS=Botry... 51 3e-05 tr|A6RNZ8|A6RNZ8_BOTFB Putative uncharacterized protein OS=Botry... 51 3e-05 tr|Q4EB49|Q4EB49_9RICK Reverse transcriptase polyprotein (Fragme... 49 2e-04 tr|A5BLH3|A5BLH3_VITVI Putative uncharacterized protein OS=Vitis... 49 2e-04 tr|Q9GQ51|Q9GQ51_DICDI Polyprotein OS=Dictyostelium discoideum G... 47 4e-04 tr|Q54VD1|Q54VD1_DICDI Putative uncharacterized protein OS=Dicty... 47 4e-04 tr|Q54AS8|Q54AS8_DICDI Putative uncharacterized protein (Fragmen... 47 4e-04 tr|A8PI98|A8PI98_COPC7 Putative uncharacterized protein OS=Copri... 47 4e-04 tr|A5C6R3|A5C6R3_VITVI Putative uncharacterized protein OS=Vitis... 46 8e-04 tr|Q6H8S0|Q6H8S0_YARLI Polyprotein (Fragment) OS=Yarrowia lipoly... 46 0.001 tr|B5FVH8|B5FVH8_YARLI YALI0E14388p2 OS=Yarrowia lipolytica GN=Y... 46 0.001 tr|A5BCK1|A5BCK1_VITVI Putative uncharacterized protein OS=Vitis... 45 0.001 tr|A5C647|A5C647_VITVI Putative uncharacterized protein OS=Vitis... 45 0.002 tr|A5B4W9|A5B4W9_VITVI Putative uncharacterized protein OS=Vitis... 45 0.002 tr|A5CA60|A5CA60_VITVI Putative uncharacterized protein OS=Vitis... 45 0.002 tr|A5BNG4|A5BNG4_VITVI Putative uncharacterized protein OS=Vitis... 45 0.002 tr|A5BH24|A5BH24_VITVI Putative uncharacterized protein OS=Vitis... 45 0.002 tr|A5ATF8|A5ATF8_VITVI Putative uncharacterized protein OS=Vitis... 45 0.002 tr|A5AH79|A5AH79_VITVI Putative uncharacterized protein OS=Vitis... 45 0.002 tr|A5AE81|A5AE81_VITVI Putative uncharacterized protein OS=Vitis... 45 0.002 tr|A5BH44|A5BH44_VITVI Putative uncharacterized protein OS=Vitis... 44 0.003 tr|A5AE33|A5AE33_VITVI Putative uncharacterized protein OS=Vitis... 44 0.003 tr|A5ACN5|A5ACN5_VITVI Putative uncharacterized protein OS=Vitis... 44 0.003
>tr|A9SEB1|A9SEB1_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_46806 PE=4 SV=1 Length = 75
Score = 108 bits (270), Expect = 1e-22 Identities = 53/75 (70%), Positives = 62/75 (82%) Frame = -2
Query: 457 KRVLWGVVIALRCDKEYLKGASVVVETNCLPLLGMITNCLTPDIAMM*WIAYIKSLNPEF 278 KR LW VV A++ +K+YL GA VV+ET+CLPLLGMITN TPDIAM+ WIAYIKSLN EF Sbjct: 1 KRELWRVVSAMKAEKDYLIGAVVVIETDCLPLLGMITNWSTPDIAMLRWIAYIKSLNLEF 60
Query: 277 KHIAGKDNPMADMLS 233 KH+ KDN +ADMLS Sbjct: 61 KHVTEKDNLVADMLS 75
>tr|Q9C0U1|Q9C0U1_YARLI YALI0A10395p OS=Yarrowia lipolytica GN=ta PE=4 SV=2 Length = 2621
Score = 52.8 bits (125), Expect = 9e-06 Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 2/90 (2%) Frame = -2
Query: 478 QRDYAQVKRVLWGVVIALRCDKEYLKGASVVVETNCLPLLGMITNCLT--PDIAMM*WIA 305 +R YA K V AL + Y+ G V+ET+ L+ ++ P+ W A Sbjct: 1946 ERTYASTKTECLAVKRALEKCRHYVTGVHFVIETDNQALVFLLQQSRVELPNAMFTRWFA 2005
Query: 304 YIKSLNPEFKHIAGKDNPMADMLSRAMYED 215 YIK + E + + G+DNP+AD LSR + D Sbjct: 2006 YIKQFDYEVRFVKGRDNPVADWLSREKFSD 2035
>tr|Q6CHG3|Q6CHG3_YARLI YALI0A08932p OS=Yarrowia lipolytica GN=YALI0A08932g PE=4 SV=1 Length = 2621
Score = 52.8 bits (125), Expect = 9e-06 Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 2/90 (2%) Frame = -2
Query: 478 QRDYAQVKRVLWGVVIALRCDKEYLKGASVVVETNCLPLLGMITNCLT--PDIAMM*WIA 305 +R YA K V AL + Y+ G V+ET+ L+ ++ P+ W A Sbjct: 1946 ERTYASTKTECLAVKRALEKCRHYVTGVHFVIETDNQALVFLLQQSRVELPNAMFTRWFA 2005
Query: 304 YIKSLNPEFKHIAGKDNPMADMLSRAMYED 215 YIK + E + + G+DNP+AD LSR + D Sbjct: 2006 YIKQFDYEVRFVKGRDNPVADWLSREKFSD 2035
>tr|Q6CFJ9|Q6CFJ9_YARLI YALI0B06303p OS=Yarrowia lipolytica GN=YALI0B06303g PE=4 SV=1 Length = 2621
Score = 52.8 bits (125), Expect = 9e-06 Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 2/90 (2%) Frame = -2
Query: 478 QRDYAQVKRVLWGVVIALRCDKEYLKGASVVVETNCLPLLGMITNCLT--PDIAMM*WIA 305 +R YA K V AL + Y+ G V+ET+ L+ ++ P+ W A Sbjct: 1946 ERTYASTKTECLAVKRALEKCRHYVTGVHFVIETDNQALVFLLQQSRVELPNAMFTRWFA 2005
Query: 304 YIKSLNPEFKHIAGKDNPMADMLSRAMYED 215 YIK + E + + G+DNP+AD LSR + D Sbjct: 2006 YIKQFDYEVRFVKGRDNPVADWLSREKFSD 2035
>tr|Q6CFJ4|Q6CFJ4_YARLI YALI0B06446p OS=Yarrowia lipolytica GN=YALI0B06446g PE=4 SV=1 Length = 2621
Score = 52.8 bits (125), Expect = 9e-06 Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 2/90 (2%) Frame = -2
Query: 478 QRDYAQVKRVLWGVVIALRCDKEYLKGASVVVETNCLPLLGMITNCLT--PDIAMM*WIA 305 +R YA K V AL + Y+ G V+ET+ L+ ++ P+ W A Sbjct: 1946 ERTYASTKTECLAVKRALEKCRHYVTGVHFVIETDNQALVFLLQQSRVELPNAMFTRWFA 2005
Query: 304 YIKSLNPEFKHIAGKDNPMADMLSRAMYED 215 YIK + E + + G+DNP+AD LSR + D Sbjct: 2006 YIKQFDYEVRFVKGRDNPVADWLSREKFSD 2035
>tr|Q6C613|Q6C613_YARLI YALI0E13376p OS=Yarrowia lipolytica GN=YALI0E13376g PE=4 SV=1 Length = 2621
Score = 52.8 bits (125), Expect = 9e-06 Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 2/90 (2%) Frame = -2
Query: 478 QRDYAQVKRVLWGVVIALRCDKEYLKGASVVVETNCLPLLGMITNCLT--PDIAMM*WIA 305 +R YA K V AL + Y+ G V+ET+ L+ ++ P+ W A Sbjct: 1946 ERTYASTKTECLAVKRALEKCRHYVTGVHFVIETDNQALVFLLQQSRVELPNAMFTRWFA 2005
Query: 304 YIKSLNPEFKHIAGKDNPMADMLSRAMYED 215 YIK + E + + G+DNP+AD LSR + D Sbjct: 2006 YIKQFDYEVRFVKGRDNPVADWLSREKFSD 2035
>tr|Q6C3G7|Q6C3G7_YARLI YALI0E34980p OS=Yarrowia lipolytica GN=YALI0E34980g PE=4 SV=1 Length = 2621
Score = 52.8 bits (125), Expect = 9e-06 Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 2/90 (2%) Frame = -2
Query: 478 QRDYAQVKRVLWGVVIALRCDKEYLKGASVVVETNCLPLLGMITNCLT--PDIAMM*WIA 305 +R YA K V AL + Y+ G V+ET+ L+ ++ P+ W A Sbjct: 1946 ERTYASTKTECLAVKRALEKCRHYVTGVHFVIETDNQALVFLLQQSRVELPNAMFTRWFA 2005
Query: 304 YIKSLNPEFKHIAGKDNPMADMLSRAMYED 215 YIK + E + + G+DNP+AD LSR + D Sbjct: 2006 YIKQFDYEVRFVKGRDNPVADWLSREKFSD 2035
>tr|A6SHV6|A6SHV6_BOTFB Putative uncharacterized protein OS=Botryotinia fuckeliana (strain B05.10) GN=BC1G_12337 PE=4 SV=1 Length = 1114
Score = 51.2 bits (121), Expect = 3e-05 Identities = 44/167 (26%), Positives = 76/167 (45%), Gaps = 9/167 (5%) Frame = -2
Query: 478 QRDYAQVKRVLWGVVIALRCDKEYLKGASVVVETNCLPLLGMITNCLT--PDIAMM*WIA 305 +++Y KR GV+ ALR + L G V+ET+ L+ + T P + WIA Sbjct: 476 EKNYDATKRECRGVLKALRKCRFDLYGIHFVLETDAKVLVAQLNRAATDLPGALVTRWIA 535
Query: 304 YIKSLNPEFKHIAGKDNPMADMLSR-------AMYEDEQDMIIEGDDFGTKFYTIDHSKS 146 +I+ + E +H+ G + AD LSR ED+++ I E + ++ + Sbjct: 536 WIRLFDFEVRHVKGTAHTAADGLSRRPATLSEVSEEDKEEDIDEW--IADQLNNVEDVST 593
Query: 145 SHACFVSSLESFAEELYEDEWLLIGRY*NNLQK*DDWTEQEFKRIRR 5 H S ++ Y E I +Y +LQ+ + T QEF + ++ Sbjct: 594 IHNFANFSRSYELDKGYNSESRKIAQYLTSLQRPEGMTSQEFSKFKK 640
>tr|A6RNZ8|A6RNZ8_BOTFB Putative uncharacterized protein OS=Botryotinia fuckeliana (strain B05.10) GN=BC1G_02171 PE=4 SV=1 Length = 1114
Score = 51.2 bits (121), Expect = 3e-05 Identities = 44/167 (26%), Positives = 76/167 (45%), Gaps = 9/167 (5%) Frame = -2
Query: 478 QRDYAQVKRVLWGVVIALRCDKEYLKGASVVVETNCLPLLGMITNCLT--PDIAMM*WIA 305 +++Y KR GV+ ALR + L G V+ET+ L+ + T P + WIA Sbjct: 476 EKNYDATKRECRGVLKALRKCRFDLYGIHFVLETDAKVLVAQLNRAATDLPGALVTRWIA 535
Query: 304 YIKSLNPEFKHIAGKDNPMADMLSR-------AMYEDEQDMIIEGDDFGTKFYTIDHSKS 146 +I+ + E +H+ G + AD LSR ED+++ I E + ++ + Sbjct: 536 WIRLFDFEVRHVKGTAHTAADGLSRRPATLSDVSEEDKEEDIDEW--IADQLNNVEDVST 593
Query: 145 SHACFVSSLESFAEELYEDEWLLIGRY*NNLQK*DDWTEQEFKRIRR 5 H S ++ Y E I +Y +LQ+ + T QEF + ++ Sbjct: 594 IHNFANFSRSYELDKGYNSESRKIAQYLTSLQRPEGMTSQEFSKFKK 640
>tr|Q4EB49|Q4EB49_9RICK Reverse transcriptase polyprotein (Fragment) OS=Wolbachia endosymbiont of Drosophila ananassae GN=WwAna1712 PE=4 SV=1 Length = 607
Score = 48.5 bits (114), Expect = 2e-04 Identities = 33/104 (31%), Positives = 56/104 (53%), Gaps = 2/104 (1%) Frame = -2
Query: 478 QRDYAQVKRVLWGVVIALRCDKEYLKGAS-VVVETNCLPLLGMITNCLTPDIAMM*WIAY 302 +R+YA K+ L +V AL+ + YL G S + + T+ L I++ P++ + W Y Sbjct: 102 ERNYATNKKELLAIVWALKNLRNYLYGVSGIEIHTDHQSLSYAISD-KNPNVELKRWFNY 160
Query: 301 IKSLNPEFKHIAGKDNPMADMLSRAMYED-EQDMIIEGDDFGTK 173 I+S P+ + G N +AD LSR + +D +E D+GT+ Sbjct: 161 IESFRPKILYKPGTTNVVADALSRIEINNITEDEDVESTDYGTQ 204
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