BP919560
Clone id YMU001_000126_E06
Library
Length 558
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000126_E06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TTGTTTTTTGTGCTCAATCCGAGCCACAGAATCACAGAATACATCTAGCAAATACCAATC
CAAGAAGCGTGGCTTTTTACAGGCAAGACACCAAAACCAAATAGCCATCAACATACTCTT
TCCTACAAGTAAAATATATCACCATAGACCACCAGGCTAACAAGAGAAGACAAACTAACC
AGAGCTCCCATTGGACGGCACCGCTTTCCACACATTACTATACCACCTTTGGCCAGAAGC
ATCACCTAAGAAAATCGATACTGTCGCATAAGGACGGAGCAGTAACTCCATCACCACACA
GGAAGAGACCAACAATCCGTCGATGAGTGCCCACCATAAGACCATAGCATGCAATCTTGC
CGACAAACCAATTTGATGCCACCAAAAAAAGACCACCGGTGATAGAACCACCATCAGAAG
TCCATCAACCTCGCCCTTGATAGATAGGGGTGCCACCATGCAACAAGCCACTGGATGATG
CATGCCCCCATCAGTCGAAGGCCAATCCATACCCAGATTTGCGTGCAAACTCACAAGCGA
GCATAACCAACTCTGACA
■■Homology search results ■■ -
sp_hit_id Q27606
Definition sp|Q27606|CP4E2_DROME Cytochrome P450 4e2 OS=Drosophila melanogaster
Align length 39
Score (bit) 28.5
E-value 2.6
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919560|Adiantum capillus-veneris mRNA, clone:
YMU001_000126_E06.
(558 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q27606|CP4E2_DROME Cytochrome P450 4e2 OS=Drosophila melanoga... 28 2.6
sp|Q9SKN3|U4977_ARATH UPF0497 membrane protein At2g28370 OS=Arab... 31 4.7
sp|Q47JS4|COBT_DECAR Nicotinate-nucleotide--dimethylbenzimidazol... 30 6.1

>sp|Q27606|CP4E2_DROME Cytochrome P450 4e2 OS=Drosophila
melanogaster GN=Cyp4e2 PE=1 SV=2
Length = 526

Score = 28.5 bits (62), Expect(2) = 2.6
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = -1

Query: 393 VFFWWHQIGLSARLHAMVLWWALIDGLLVSSCVVMELLL 277
VF WWHQ G V W +LV+S +E +L
Sbjct: 59 VFSWWHQYGKD----NFVFWIGTYSNVLVTSSKYLEFIL 93



Score = 20.8 bits (42), Expect(2) = 2.6
Identities = 10/29 (34%), Positives = 13/29 (44%), Gaps = 9/29 (31%)
Frame = -2

Query: 503 GLRLMGAC---------IIQWLVAWWHPY 444
GL LMG I+ + +WWH Y
Sbjct: 38 GLPLMGNAHQMGKNPSEILDTVFSWWHQY 66


>sp|Q9SKN3|U4977_ARATH UPF0497 membrane protein At2g28370
OS=Arabidopsis thaliana GN=At2g28370 PE=2 SV=1
Length = 179

Score = 30.8 bits (68), Expect = 4.7
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 10/58 (17%)
Frame = -3

Query: 421 TSDGGSITGGLFLVASNWF-------VGKIACYGLMVGT---HRRIVGLFLCGDGVTA 278
TSD S+T +LVA+ + + Y +MV +RR+V LF GDGVT+
Sbjct: 62 TSDFPSVTAFCYLVAATGLQSLWSLALAMVDVYAIMVKRSLQNRRLVSLFAIGDGVTS 119


>sp|Q47JS4|COBT_DECAR Nicotinate-nucleotide--dimethylbenzimidazole
phosphoribosyltransferase OS=Dechloromonas aromatica
(strain RCB) GN=cobT PE=3 SV=1
Length = 348

Score = 30.4 bits (67), Expect = 6.1
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +2

Query: 344 IACNLADKPI*CHQKKTTGDRTTIRSPSTSPLIDRGATMQQATG 475
+A L D + CH+ G RT + + PL+D G + + TG
Sbjct: 275 LAPALLDYCVFCHRSAEAGHRTQLLAMGAEPLLDLGLRLGEGTG 318


tr_hit_id Q74M05
Definition tr|Q74M05|Q74M05_LACJO Putative uncharacterized protein OS=Lactobacillus johnsonii
Align length 92
Score (bit) 35.4
E-value 2.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919560|Adiantum capillus-veneris mRNA, clone:
YMU001_000126_E06.
(558 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q74M05|Q74M05_LACJO Putative uncharacterized protein OS=Lacto... 35 2.1
tr|A7NWX7|A7NWX7_VITVI Chromosome chr5 scaffold_2, whole genome ... 35 3.6
tr|Q2KUS8|Q2KUS8_BORA1 Putative cobalt ABC transporter, permease... 34 4.7
tr|B5EQY8|B5EQY8_ACIF5 Cytochrome-c oxidase OS=Acidithiobacillus... 34 6.1
tr|A5GS19|A5GS19_SYNR3 Alpha-glycosidase of family GH77; probabl... 34 6.1
tr|B7JAQ3|B7JAQ3_THIFE Cytochrome c oxidase, aa3-type, subunit I... 34 6.1
tr|B3MZ17|B3MZ17_DROAN GF22245 OS=Drosophila ananassae GN=GF2224... 33 7.9
tr|B2JCB5|B2JCB5_BURP8 Protoheme IX farnesyltransferase OS=Burkh... 33 8.1
tr|A0NXD2|A0NXD2_9RHOB Putative uncharacterized protein OS=Labre... 33 8.1

>tr|Q74M05|Q74M05_LACJO Putative uncharacterized protein
OS=Lactobacillus johnsonii GN=LJ_0029 PE=4 SV=1
Length = 444

Score = 35.4 bits (80), Expect = 2.1
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Frame = -1

Query: 516 LGMDWPSTDGGMHHPVACCMVAPLSIKGEVDGLLMVVLSPVVFFWWHQIGLSARLHAMVL 337
+G+ +P GG H+ + PL I+ E G L +L PVVFF L + +M+
Sbjct: 283 IGLAFPHVLGGSHYLIDSLFHNPLIIQEEKLGQLSWILIPVVFF------LLRLIFSMIS 336

Query: 336 WWALIDGLLVSSCVVMELLLRP-YATVSIFLG 244
+ + I G +V+ L+ +AT+ I LG
Sbjct: 337 YCSSIPGGTFMPILVLGALMGTIFATIFIHLG 368


>tr|A7NWX7|A7NWX7_VITVI Chromosome chr5 scaffold_2, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00020097001
PE=4 SV=1
Length = 422

Score = 34.7 bits (78), Expect = 3.6
Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Frame = -1

Query: 432 EVDGLLMVVLSPVVFFWWHQIGLSARLHAMVLWWALIDGLLVSSCVVMELLLRPYATVSI 253
EVDG L +SP WW + G+ R +V W LI G VS+ V+E + +
Sbjct: 147 EVDGALSHGVSPDGSRWWRETGIEQRPDGVVCRWTLIRG--VSADHVVEWEEKFWEAADK 204

Query: 252 F----LG-DASGQRWYSNVWK 205
F LG + SG+ NVW+
Sbjct: 205 FQYKELGSEKSGRDATGNVWR 225


>tr|Q2KUS8|Q2KUS8_BORA1 Putative cobalt ABC transporter, permease
protein OS=Bordetella avium (strain 197N) GN=BAV1078
PE=4 SV=1
Length = 195

Score = 34.3 bits (77), Expect = 4.7
Identities = 25/100 (25%), Positives = 47/100 (47%), Gaps = 11/100 (11%)
Frame = -1

Query: 471 VACCMVAPLSIKGEVDGLLMVVLSPVVFFWWHQIG-----LSARLHAMVLWWALIDGLLV 307
+ACC P + ++ GL +VL+ +F WW Q G + AR A++ + ++
Sbjct: 52 IACCRPRPQRLWRQLRGLFWIVLALALFTWWAQDGQQALVVLARTAALICFATVLSLSTP 111

Query: 306 SSCVV--MELLLRPYA----TVSIFLGDASGQRWYSNVWK 205
S ++ +EL L P++ + L A R+ +W+
Sbjct: 112 VSALLATIELALSPWSRWVNPARVSLALALCLRFIPEIWR 151


>tr|B5EQY8|B5EQY8_ACIF5 Cytochrome-c oxidase OS=Acidithiobacillus
ferrooxidans (strain ATCC 53993) GN=Lferr_2747 PE=4 SV=1
Length = 627

Score = 33.9 bits (76), Expect = 6.1
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = -2

Query: 494 LMGACIIQWLVA--WWHPYLSRARLMDF*WWFYHRWSFF 384
++G I W+ A WW P ++ ++ +F W +H W FF
Sbjct: 472 MLGGVIFSWIAALYWWFPKVTGRKINEF-WGKFHAWWFF 509


>tr|A5GS19|A5GS19_SYNR3 Alpha-glycosidase of family GH77; probable
4-alpha-glucanotransferase OS=Synechococcus sp. (strain
RCC307) GN=malQ PE=4 SV=1
Length = 469

Score = 33.9 bits (76), Expect = 6.1
Identities = 15/40 (37%), Positives = 17/40 (42%), Gaps = 2/40 (5%)
Frame = -2

Query: 413 WWFYHRWSFFGGIKLVCRQDCM--LWSYGGHSSTDCWSLP 300
WW +W G C + L YG H S D WSLP
Sbjct: 155 WWLQQQWQRLRGASADCGVQILGDLPFYGAHDSADVWSLP 194


>tr|B7JAQ3|B7JAQ3_THIFE Cytochrome c oxidase, aa3-type, subunit I
OS=Acidithiobacillus ferrooxidans ATCC 23270 GN=coxA
PE=4 SV=1
Length = 627

Score = 33.9 bits (76), Expect = 6.1
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = -2

Query: 494 LMGACIIQWLVA--WWHPYLSRARLMDF*WWFYHRWSFF 384
++G I W+ A WW P ++ ++ +F W +H W FF
Sbjct: 472 MLGGVIFSWIAALYWWFPKVTGRKINEF-WGKFHAWWFF 509


>tr|B3MZ17|B3MZ17_DROAN GF22245 OS=Drosophila ananassae GN=GF22245
PE=4 SV=1
Length = 1577

Score = 33.5 bits (75), Expect = 7.9
Identities = 24/56 (42%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +3

Query: 354 ILPTNQFDATKKRPPV--IEPPSEVHQPRP**IGVPPCNKPLDDACPHQSKANPYP 515
IL T Q D+ PPV PPS+ P P PP P DDA P QS++N P
Sbjct: 127 ILDTVQEDSVDPTPPVPTAPPPSDPPPPPP-----PP---PPDDASPEQSESNRSP 174


>tr|B2JCB5|B2JCB5_BURP8 Protoheme IX farnesyltransferase
OS=Burkholderia phymatum (strain DSM 17167 / STM815)
GN=Bphy_0286 PE=4 SV=1
Length = 301

Score = 33.5 bits (75), Expect = 8.1
Identities = 33/128 (25%), Positives = 52/128 (40%), Gaps = 7/128 (5%)
Frame = -1

Query: 444 SIKGEVDGLLMVVLSPV---VFFWWHQIGLSARLHAMVLWWALIDGLLVSSCVVMELLLR 274
S +GE+ +++ S V V W L +A+ +W + V ++ LLL+
Sbjct: 87 SARGEITTSQILLFSAVLGAVGMWT----LYTFTNALTMWLTI--ATFVGYAIIYTLLLK 140

Query: 273 PYATVSIFLGDASGQRWYSNVWKAVPSNGSSG*FVFSC*PGGLW*YILLVGKSMLMAIW- 97
PY +I +G ASG + W AV PG W +L++ +W
Sbjct: 141 PYTPQNIVIGGASGAMPPALGWAAVT----------GAVPGDAWILVLII------FVWT 184

Query: 96 ---FWCLA 82
FW LA
Sbjct: 185 PPHFWALA 192


>tr|A0NXD2|A0NXD2_9RHOB Putative uncharacterized protein
OS=Labrenzia aggregata IAM 12614 GN=SIAM614_27867 PE=4
SV=1
Length = 819

Score = 33.5 bits (75), Expect = 8.1
Identities = 28/93 (30%), Positives = 49/93 (52%), Gaps = 13/93 (13%)
Frame = -1

Query: 432 EVDGLLMVVLSPVV-FFWWHQIGLSARLHAMVLWWALIDGLLVSSCVVME---LLLRP-- 271
EV+G++ V + + + HQ +S M LW A++ GLL+S+C+V+E L ++P
Sbjct: 323 EVNGVVPPVTAGIPESYKTHQPSVSPGKSGMPLWLAVVAGLLLSTCLVLEGKRLTIKPGP 382

Query: 270 ---YAT-VSIFLGDASGQRWYS---NVWKAVPS 193
+A V+ F + G W VW+ +P+
Sbjct: 383 PKTFANPVAEFKYGSIGAEWDGFPYMVWRELPT 415