BP919568 |
Clone id |
YMU001_000126_F02 |
Library |
YMU01 |
Length |
561 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000126_F02. |
Accession |
BP919568 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1365Contig1 |
Sequence |
AGGGGACATCTGGCCCCCAAAGGTGCCAGATTCACAAGGCTTATGGTGCTCCAGAACGTC TACCAACAGCGCACACCTGCTTCAACCAGCTTGATCTTCCGGAGTACTCATCAAAGCAGC AGTTACAAGAGAGATTGCTGCTTGCGATCCATGAGGGTAGCGAAGGATTCGGTTTTGGTT GACAGATTTTTAGCTTGTGCATGTTGAGCAACTTGGGCTGTAATGTAATGCTTTCGACAT GGTTTCTGTGAAGGCCTCATATTGGTCTATAGCTCCTCGAACTTGTTGCGGGGTTGCCTG ATAAGGACCATGCATCGGGATGGAAGAAGTGAGCAACTCATGTATGACTGTTGCCATCAA TTTTGGCCGAGCTCTATAGGGAGGATATCTATTAAAACAGAGATCTCCTCGACATACGTG CAGTAGCACATACACGGTTGAGAATCAATTGTATAAAAGGTTTGGAGGACCACCAGCATT GCAATGCAGGATTCTATTTGTAGAAAAGCCTACAGAGTCTTGCAAGAGCATGTCCTCCAT GTAATCTTTGTAATCTAATAG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8GY23 |
Definition |
sp|Q8GY23|UPL1_ARATH E3 ubiquitin-protein ligase UPL1 OS=Arabidopsis thaliana |
Align length |
58 |
Score (bit) |
112.0 |
E-value |
1.0e-24 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q6K3Y7 |
Definition |
tr|Q6K3Y7|Q6K3Y7_ORYSJ Putative ubiquitin-protein ligase 1 OS=Oryza sativa subsp. japonica |
Align length |
59 |
Score (bit) |
114.0 |
E-value |
3.0e-24 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP919568|Adiantum capillus-veneris mRNA, clone: YMU001_000126_F02. (561 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q6K3Y7|Q6K3Y7_ORYSJ Putative ubiquitin-protein ligase 1 OS=Or... 114 3e-24 tr|A7Q998|A7Q998_VITVI Chromosome chr19 scaffold_66, whole genom... 114 3e-24 tr|A5ATX6|A5ATX6_VITVI Putative uncharacterized protein OS=Vitis... 114 3e-24 tr|A3BWI1|A3BWI1_ORYSJ Putative uncharacterized protein OS=Oryza... 114 3e-24 tr|A9SYT0|A9SYT0_PHYPA Predicted protein (Fragment) OS=Physcomit... 111 3e-23 tr|B8BDE1|B8BDE1_ORYSI Putative uncharacterized protein OS=Oryza... 107 4e-22 tr|Q2QSH6|Q2QSH6_ORYSJ E3 ubiquitin protein ligase UPL1, putativ... 105 2e-21 tr|Q0INM5|Q0INM5_ORYSJ Os12g0428600 protein OS=Oryza sativa subs... 105 2e-21 tr|B8BPD0|B8BPD0_ORYSI Putative uncharacterized protein OS=Oryza... 105 2e-21 tr|A3CGV1|A3CGV1_ORYSJ Putative uncharacterized protein OS=Oryza... 105 2e-21 tr|A7NUJ7|A7NUJ7_VITVI Chromosome chr18 scaffold_1, whole genome... 102 1e-20 tr|A5BAJ1|A5BAJ1_VITVI Putative uncharacterized protein OS=Vitis... 102 1e-20 tr|A8HPC8|A8HPC8_CHLRE Predicted protein OS=Chlamydomonas reinha... 91 4e-17 tr|B6K2A3|B6K2A3_SCHJP HECT domain-containing protein OS=Schizos... 86 1e-15 tr|A9UUJ4|A9UUJ4_MONBE Predicted protein OS=Monosiga brevicollis... 84 5e-15 tr|A8N5V6|A8N5V6_COPC7 Putative uncharacterized protein OS=Copri... 84 7e-15 tr|B0D0J1|B0D0J1_LACBS Predicted protein OS=Laccaria bicolor (st... 83 9e-15 tr|Q4P8X1|Q4P8X1_USTMA Putative uncharacterized protein OS=Ustil... 83 1e-14 tr|A4S6X1|A4S6X1_OSTLU Predicted protein OS=Ostreococcus lucimar... 82 2e-14 tr|Q6CFL1|Q6CFL1_YARLI YALI0B05940p OS=Yarrowia lipolytica GN=YA... 82 2e-14 tr|Q1JTI3|Q1JTI3_TOXGO Ubiquitin-protein ligase 1, putative OS=T... 82 2e-14 tr|B6KUI7|B6KUI7_TOXGO Ubiquitin-transferase domain-containing p... 82 2e-14 tr|Q00WM5|Q00WM5_OSTTA E3 ubiquitin protein ligase UPL1 (ISS) OS... 81 3e-14 tr|A8Q4D0|A8Q4D0_MALGO Putative uncharacterized protein OS=Malas... 81 3e-14 tr|B6K591|B6K591_SCHJP HECT domain containing protein OS=Schizos... 80 6e-14 tr|Q8IB94|Q8IB94_PLAF7 Ubiquitin-protein ligase 1, putative OS=P... 80 8e-14 tr|Q7RQR2|Q7RQR2_PLAYO HECT-domain, putative (Fragment) OS=Plasm... 80 1e-13 tr|Q5CHN2|Q5CHN2_CRYHO Ubiquitin-protein ligase 1 OS=Cryptospori... 80 1e-13 tr|Q4YSW6|Q4YSW6_PLABE Putative uncharacterized protein OS=Plasm... 80 1e-13 tr|Q4XCP3|Q4XCP3_PLACH Putative uncharacterized protein (Fragmen... 80 1e-13
>tr|Q6K3Y7|Q6K3Y7_ORYSJ Putative ubiquitin-protein ligase 1 OS=Oryza sativa subsp. japonica GN=P0574F11.30 PE=4 SV=1 Length = 3716
Score = 114 bits (286), Expect = 3e-24 Identities = 53/59 (89%), Positives = 56/59 (94%) Frame = +3
Query: 3 GTSGPQRCQIHKAYGAPERLPTAHTCFNQLDLPEYSSKQQLQERLLLAIHEGSEGFGFG 179 G SGPQR QIHKAYGAPERLP+AHTCFNQLDLPEYSSK+QL+ERLLLAIHE SEGFGFG Sbjct: 3658 GISGPQRFQIHKAYGAPERLPSAHTCFNQLDLPEYSSKEQLEERLLLAIHEASEGFGFG 3716
>tr|A7Q998|A7Q998_VITVI Chromosome chr19 scaffold_66, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00033390001 PE=4 SV=1 Length = 464
Score = 114 bits (286), Expect = 3e-24 Identities = 53/59 (89%), Positives = 56/59 (94%) Frame = +3
Query: 3 GTSGPQRCQIHKAYGAPERLPTAHTCFNQLDLPEYSSKQQLQERLLLAIHEGSEGFGFG 179 G SGPQ+ QIHKAYGAPERLP+AHTCFNQLDLPEYSSK+QLQERLLLAIHE SEGFGFG Sbjct: 406 GISGPQKFQIHKAYGAPERLPSAHTCFNQLDLPEYSSKEQLQERLLLAIHEASEGFGFG 464
>tr|A5ATX6|A5ATX6_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_042363 PE=4 SV=1 Length = 342
Score = 114 bits (286), Expect = 3e-24 Identities = 53/59 (89%), Positives = 56/59 (94%) Frame = +3
Query: 3 GTSGPQRCQIHKAYGAPERLPTAHTCFNQLDLPEYSSKQQLQERLLLAIHEGSEGFGFG 179 G SGPQ+ QIHKAYGAPERLP+AHTCFNQLDLPEYSSK+QLQERLLLAIHE SEGFGFG Sbjct: 284 GISGPQKFQIHKAYGAPERLPSAHTCFNQLDLPEYSSKEQLQERLLLAIHEASEGFGFG 342
>tr|A3BWI1|A3BWI1_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_027403 PE=4 SV=1 Length = 3647
Score = 114 bits (286), Expect = 3e-24 Identities = 53/59 (89%), Positives = 56/59 (94%) Frame = +3
Query: 3 GTSGPQRCQIHKAYGAPERLPTAHTCFNQLDLPEYSSKQQLQERLLLAIHEGSEGFGFG 179 G SGPQR QIHKAYGAPERLP+AHTCFNQLDLPEYSSK+QL+ERLLLAIHE SEGFGFG Sbjct: 3589 GISGPQRFQIHKAYGAPERLPSAHTCFNQLDLPEYSSKEQLEERLLLAIHEASEGFGFG 3647
>tr|A9SYT0|A9SYT0_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_137606 PE=4 SV=1 Length = 3732
Score = 111 bits (277), Expect = 3e-23 Identities = 50/59 (84%), Positives = 56/59 (94%) Frame = +3
Query: 3 GTSGPQRCQIHKAYGAPERLPTAHTCFNQLDLPEYSSKQQLQERLLLAIHEGSEGFGFG 179 G SGPQR QIHKAYGAPERLP+AHTCFNQLDLP+Y++K+QLQ+RLLLAIHE SEGFGFG Sbjct: 3674 GISGPQRFQIHKAYGAPERLPSAHTCFNQLDLPDYATKEQLQDRLLLAIHEASEGFGFG 3732
>tr|B8BDE1|B8BDE1_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_30556 PE=4 SV=1 Length = 3604
Score = 107 bits (267), Expect = 4e-22 Identities = 50/57 (87%), Positives = 53/57 (92%) Frame = +3
Query: 3 GTSGPQRCQIHKAYGAPERLPTAHTCFNQLDLPEYSSKQQLQERLLLAIHEGSEGFG 173 G SGPQR QIHKAYGAPERLP+AHTCFNQLDLPEYSSK+QL+ERLLLAIHE SE FG Sbjct: 3527 GISGPQRFQIHKAYGAPERLPSAHTCFNQLDLPEYSSKEQLEERLLLAIHEASEDFG 3583
>tr|Q2QSH6|Q2QSH6_ORYSJ E3 ubiquitin protein ligase UPL1, putative, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os12g24080 PE=4 SV=2 Length = 1000
Score = 105 bits (262), Expect = 2e-21 Identities = 48/59 (81%), Positives = 53/59 (89%) Frame = +3
Query: 3 GTSGPQRCQIHKAYGAPERLPTAHTCFNQLDLPEYSSKQQLQERLLLAIHEGSEGFGFG 179 G SGPQR QIHKAYG+ LP+AHTCFNQLDLPEY+SK+QLQERLLLAIHE +EGFGFG Sbjct: 942 GISGPQRFQIHKAYGSTNHLPSAHTCFNQLDLPEYTSKEQLQERLLLAIHEANEGFGFG 1000
>tr|Q0INM5|Q0INM5_ORYSJ Os12g0428600 protein OS=Oryza sativa subsp. japonica GN=Os12g0428600 PE=4 SV=1 Length = 761
Score = 105 bits (262), Expect = 2e-21 Identities = 48/59 (81%), Positives = 53/59 (89%) Frame = +3
Query: 3 GTSGPQRCQIHKAYGAPERLPTAHTCFNQLDLPEYSSKQQLQERLLLAIHEGSEGFGFG 179 G SGPQR QIHKAYG+ LP+AHTCFNQLDLPEY+SK+QLQERLLLAIHE +EGFGFG Sbjct: 703 GISGPQRFQIHKAYGSTNHLPSAHTCFNQLDLPEYTSKEQLQERLLLAIHEANEGFGFG 761
>tr|B8BPD0|B8BPD0_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_38149 PE=4 SV=1 Length = 3619
Score = 105 bits (262), Expect = 2e-21 Identities = 48/59 (81%), Positives = 53/59 (89%) Frame = +3
Query: 3 GTSGPQRCQIHKAYGAPERLPTAHTCFNQLDLPEYSSKQQLQERLLLAIHEGSEGFGFG 179 G SGPQR QIHKAYG+ LP+AHTCFNQLDLPEY+SK+QLQERLLLAIHE +EGFGFG Sbjct: 3561 GISGPQRFQIHKAYGSTNHLPSAHTCFNQLDLPEYTSKEQLQERLLLAIHEANEGFGFG 3619
>tr|A3CGV1|A3CGV1_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_034523 PE=4 SV=1 Length = 3788
Score = 105 bits (262), Expect = 2e-21 Identities = 48/59 (81%), Positives = 53/59 (89%) Frame = +3
Query: 3 GTSGPQRCQIHKAYGAPERLPTAHTCFNQLDLPEYSSKQQLQERLLLAIHEGSEGFGFG 179 G SGPQR QIHKAYG+ LP+AHTCFNQLDLPEY+SK+QLQERLLLAIHE +EGFGFG Sbjct: 3730 GISGPQRFQIHKAYGSTNHLPSAHTCFNQLDLPEYTSKEQLQERLLLAIHEANEGFGFG 3788
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