BP919571
Clone id YMU001_000126_F06
Library
Length 319
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000126_F06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TTGTTGAAGAACTAATCAAAAAATTTAGATCAAGAATAGAATACACAGACTAATTGAGCT
AGCAAACATTCTGGATTTTTCACTTAAGAATGACATTGTGGTTCATAGGGGGTTTGAGAA
GAAAGCCTATTGGAGCACCTCTTCTCTCTCTGCAAGAACAAGCCAGCCTCATGACACAAG
GGCAATCCCGGCGGCGAGGAGGTTATTCGAGAGCAGTTGACTAGCAGCCTGAGATGGATG
GACACTGTCAAAAAAAACGAACTCCGATGCATTTGTGCACGTTCCCGGCAAGTATTGATT
GCACAAAATCGCAGTCTCA
■■Homology search results ■■ -
sp_hit_id A9JRC7
Definition sp|A9JRC7|PP4CB_DANRE Serine/threonine-protein phosphatase 4 catalytic subunit B OS=Danio rerio
Align length 27
Score (bit) 30.0
E-value 3.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919571|Adiantum capillus-veneris mRNA, clone:
YMU001_000126_F06.
(319 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|A9JRC7|PP4CB_DANRE Serine/threonine-protein phosphatase 4 cat... 30 3.7
sp|A8WGP3|PP4CA_DANRE Serine/threonine-protein phosphatase 4 cat... 30 3.7
sp|Q7TQ62|PODN_MOUSE Podocan OS=Mus musculus GN=Podn PE=2 SV=1 30 3.7
sp|Q96NS5|ASB16_HUMAN Ankyrin repeat and SOCS box protein 16 OS=... 30 3.7
sp|P10865|FUS_NDVM Fusion glycoprotein F0 OS=Newcastle disease v... 29 6.3
sp|Q8VHS5|ASB16_MOUSE Ankyrin repeat and SOCS box protein 16 OS=... 29 6.3
sp|O26824|PSMR_METTH Proteasome-activating nucleotidase OS=Metha... 29 8.3
sp|P43574|GAT1_YEAST Transcriptional regulatory protein GAT1 OS=... 29 8.3
sp|P14623|FUS_NDVI Fusion glycoprotein F0 OS=Newcastle disease v... 29 8.3

>sp|A9JRC7|PP4CB_DANRE Serine/threonine-protein phosphatase 4
catalytic subunit B OS=Danio rerio GN=ppp4cb PE=2 SV=1
Length = 307

Score = 30.0 bits (66), Expect = 3.7
Identities = 9/27 (33%), Positives = 22/27 (81%)
Frame = +1

Query: 229 LRWMDTVKKNELRCICARSRQVLIAQN 309
LR + +K+NE++ +CA++R++L+ ++
Sbjct: 14 LRRCELIKENEVKALCAKAREILVEES 40


>sp|A8WGP3|PP4CA_DANRE Serine/threonine-protein phosphatase 4
catalytic subunit A OS=Danio rerio GN=ppp4ca PE=2 SV=1
Length = 311

Score = 30.0 bits (66), Expect = 3.7
Identities = 9/27 (33%), Positives = 22/27 (81%)
Frame = +1

Query: 229 LRWMDTVKKNELRCICARSRQVLIAQN 309
LR + +K+NE++ +CA++R++L+ ++
Sbjct: 18 LRRCELIKENEVKALCAKAREILVEES 44


>sp|Q7TQ62|PODN_MOUSE Podocan OS=Mus musculus GN=Podn PE=2 SV=1
Length = 611

Score = 30.0 bits (66), Expect = 3.7
Identities = 12/46 (26%), Positives = 24/46 (52%)
Frame = +2

Query: 56 ELANILDFSLKNDIVVHRGFEKKAYWSTSSLSARTSQPHDTRAIPA 193
EL+N+ + L+N+ + G + + +W SSL ++ +PA
Sbjct: 261 ELSNLRELYLQNNYLTDEGLDNETFWKLSSLEYLDLSSNNLSRVPA 306


>sp|Q96NS5|ASB16_HUMAN Ankyrin repeat and SOCS box protein 16
OS=Homo sapiens GN=ASB16 PE=1 SV=1
Length = 453

Score = 30.0 bits (66), Expect = 3.7
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +3

Query: 261 TPMHLCTFPASIDCTK 308
TP+HLCT P S+ C K
Sbjct: 178 TPLHLCTIPESLQCAK 193


>sp|P10865|FUS_NDVM Fusion glycoprotein F0 OS=Newcastle disease
virus (strain Miyadera/51) GN=F PE=3 SV=1
Length = 553

Score = 29.3 bits (64), Expect = 6.3
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = -3

Query: 251 LTVSIHLRLLVNCSRITSSPPGLPLCHEAGLFLQREKRCSNRLSSQT 111
L ++I + L + C R+TSS G PL AG+ + +K + SSQT
Sbjct: 13 LMLTIWIALALGCVRLTSSLDGRPLA-AAGIVVTGDKAVNIYTSSQT 58


>sp|Q8VHS5|ASB16_MOUSE Ankyrin repeat and SOCS box protein 16 OS=Mus
musculus GN=Asb16 PE=2 SV=1
Length = 453

Score = 29.3 bits (64), Expect = 6.3
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +3

Query: 261 TPMHLCTFPASIDCTK 308
TP+HLCT P S+ C K
Sbjct: 178 TPLHLCTSPESLQCAK 193


>sp|O26824|PSMR_METTH Proteasome-activating nucleotidase
OS=Methanobacterium thermoautotrophicum GN=pan PE=3 SV=1
Length = 410

Score = 28.9 bits (63), Expect = 8.3
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Frame = -3

Query: 287 RERAQMHRSSFFLTVSIHLRLLVNCSRITSSPPGLPL---CHEAGLFLQREKR 138
RE ++H S L + + LL +RIT G L C EAG+F R++R
Sbjct: 328 REILKIHTSGMALAEEVDIELL---ARITDGASGADLKAICTEAGMFAIRDER 377


>sp|P43574|GAT1_YEAST Transcriptional regulatory protein GAT1
OS=Saccharomyces cerevisiae GN=GAT1 PE=1 SV=1
Length = 510

Score = 28.9 bits (63), Expect = 8.3
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 8/32 (25%)
Frame = -3

Query: 221 VNCSRITSS--------PPGLPLCHEAGLFLQ 150
+ CS T+S P GLPLC+ GLFL+
Sbjct: 308 IKCSNCTTSTTPLWRKDPKGLPLCNACGLFLK 339


>sp|P14623|FUS_NDVI Fusion glycoprotein F0 OS=Newcastle disease
virus (strain Italien/45) GN=F PE=2 SV=1
Length = 553

Score = 28.9 bits (63), Expect = 8.3
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = -3

Query: 251 LTVSIHLRLLVNCSRITSSPPGLPLCHEAGLFLQREKRCSNRLSSQT 111
L + I + L ++C R+TSS G PL AG+ + +K SSQT
Sbjct: 13 LMLIIRIALTLSCIRLTSSLDGRPLA-AAGIVVTGDKAVDIYTSSQT 58


tr_hit_id A9PHY7
Definition tr|A9PHY7|A9PHY7_POPTR Putative uncharacterized protein OS=Populus trichocarpa
Align length 47
Score (bit) 47.0
E-value 0.0005
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919571|Adiantum capillus-veneris mRNA, clone:
YMU001_000126_F06.
(319 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9PHY7|A9PHY7_POPTR Putative uncharacterized protein OS=Popul... 47 5e-04
tr|A9NLS1|A9NLS1_PICSI Putative uncharacterized protein OS=Picea... 47 6e-04
tr|Q9FFC6|Q9FFC6_ARATH GDSL-motif lipase/hydrolase-like protein ... 45 0.002
tr|B6TNT3|B6TNT3_MAIZE Anther-specific proline-rich protein APG ... 45 0.002
tr|B4G053|B4G053_MAIZE Putative uncharacterized protein OS=Zea m... 45 0.002
tr|Q9FT04|Q9FT04_CICAR Putative proline-rich protein APG isolog ... 44 0.003
tr|B7FFR0|B7FFR0_MEDTR Putative uncharacterized protein (Fragmen... 44 0.003
tr|A7PQL0|A7PQL0_VITVI Chromosome chr6 scaffold_25, whole genome... 43 0.007
tr|Q9AUJ9|Q9AUJ9_ORYSA Putative proline-rich protein OS=Oryza sa... 42 0.012
tr|Q7Y007|Q7Y007_ORYSJ Os03g0683800 protein OS=Oryza sativa subs... 42 0.012
tr|A9TAB3|A9TAB3_PHYPA Predicted protein OS=Physcomitrella paten... 42 0.012
tr|A3ALH2|A3ALH2_ORYSJ Putative uncharacterized protein OS=Oryza... 42 0.012
tr|A2XKR5|A2XKR5_ORYSI Putative uncharacterized protein OS=Oryza... 42 0.012
tr|A7PPP2|A7PPP2_VITVI Chromosome chr8 scaffold_23, whole genome... 42 0.020
tr|A7NSR5|A7NSR5_VITVI Chromosome chr18 scaffold_1, whole genome... 42 0.020
tr|A5BE55|A5BE55_VITVI Putative uncharacterized protein (Chromos... 42 0.020
tr|Q9LZC6|Q9LZC6_ARATH Putative uncharacterized protein F8F6_20 ... 41 0.026
tr|Q9LU14|Q9LU14_ARATH Proline-rich protein APG-like; GDSL-motif... 41 0.026
tr|Q9FFN0|Q9FFN0_ARATH Proline-rich protein APG-like OS=Arabidop... 41 0.026
tr|O04320|O04320_ARATH Proline-rich protein APG isolog OS=Arabid... 41 0.026
tr|B4FQB9|B4FQB9_MAIZE Putative uncharacterized protein OS=Zea m... 41 0.026
tr|A7NSR9|A7NSR9_VITVI Chromosome chr18 scaffold_1, whole genome... 41 0.026
tr|A7NSR6|A7NSR6_VITVI Chromosome chr18 scaffold_1, whole genome... 41 0.026
tr|Q9LZC5|Q9LZC5_ARATH Putative uncharacterized protein F8F6_30 ... 41 0.034
tr|A9TBK8|A9TBK8_PHYPA Predicted protein OS=Physcomitrella paten... 41 0.034
tr|Q5VND9|Q5VND9_ORYSJ Os06g0149100 protein OS=Oryza sativa subs... 40 0.058
tr|Q42118|Q42118_ARATH Proline-rich protein APG (Fragment) OS=Ar... 40 0.058
tr|B8B2R2|B8B2R2_ORYSI Putative uncharacterized protein OS=Oryza... 40 0.058
tr|A3B8E8|A3B8E8_ORYSJ Putative uncharacterized protein OS=Oryza... 40 0.058
tr|Q9SIQ3|Q9SIQ3_ARATH Putative GDSL-motif lipase/hydrolase OS=A... 40 0.076

>tr|A9PHY7|A9PHY7_POPTR Putative uncharacterized protein OS=Populus
trichocarpa PE=2 SV=1
Length = 352

Score = 47.0 bits (110), Expect = 5e-04
Identities = 21/47 (44%), Positives = 28/47 (59%)
Frame = -2

Query: 315 TAILCNQYLPGTCTNASEFVFFDSVHPXXXXXXXXXXXXXXAGIALV 175
T++LCN PGTC NA+E+VF+DSVHP GI+L+
Sbjct: 305 TSLLCNPKSPGTCPNATEYVFWDSVHPSQAANQVLADALILQGISLI 351


>tr|A9NLS1|A9NLS1_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 350

Score = 46.6 bits (109), Expect = 6e-04
Identities = 22/49 (44%), Positives = 28/49 (57%)
Frame = -2

Query: 318 ETAILCNQYLPGTCTNASEFVFFDSVHPXXXXXXXXXXXXXXAGIALVS 172
ETA+LCN GTC NAS++VF+DS HP GI+L+S
Sbjct: 302 ETAVLCNPRSIGTCANASQYVFWDSFHPTQAANELLSNALILQGISLIS 350


>tr|Q9FFC6|Q9FFC6_ARATH GDSL-motif lipase/hydrolase-like protein
OS=Arabidopsis thaliana GN=At5g22810 PE=4 SV=1
Length = 337

Score = 44.7 bits (104), Expect = 0.002
Identities = 21/49 (42%), Positives = 28/49 (57%)
Frame = -2

Query: 318 ETAILCNQYLPGTCTNASEFVFFDSVHPXXXXXXXXXXXXXXAGIALVS 172
ET+ILCN GTC NA+E+VF+D HP +GI+L+S
Sbjct: 289 ETSILCNPKSVGTCNNATEYVFWDGFHPTEAANKILADNLLVSGISLIS 337


>tr|B6TNT3|B6TNT3_MAIZE Anther-specific proline-rich protein APG
OS=Zea mays PE=2 SV=1
Length = 360

Score = 44.7 bits (104), Expect = 0.002
Identities = 17/28 (60%), Positives = 23/28 (82%)
Frame = -2

Query: 318 ETAILCNQYLPGTCTNASEFVFFDSVHP 235
ET++LC+Q PGTCTNA+ +VF+D HP
Sbjct: 312 ETSVLCHQGAPGTCTNATGYVFWDGFHP 339


>tr|B4G053|B4G053_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 359

Score = 44.7 bits (104), Expect = 0.002
Identities = 17/28 (60%), Positives = 23/28 (82%)
Frame = -2

Query: 318 ETAILCNQYLPGTCTNASEFVFFDSVHP 235
ET++LC+Q PGTCTNA+ +VF+D HP
Sbjct: 311 ETSVLCHQGAPGTCTNATGYVFWDGFHP 338


>tr|Q9FT04|Q9FT04_CICAR Putative proline-rich protein APG isolog
(Fragment) OS=Cicer arietinum PE=2 SV=1
Length = 350

Score = 44.3 bits (103), Expect = 0.003
Identities = 20/48 (41%), Positives = 29/48 (60%)
Frame = -2

Query: 315 TAILCNQYLPGTCTNASEFVFFDSVHPXXXXXXXXXXXXXXAGIALVS 172
T++LCN GTC+NA+++VF+DSVHP GIAL++
Sbjct: 303 TSLLCNPKSIGTCSNATQYVFWDSVHPSQAANQVLADSLLLQGIALIA 350


>tr|B7FFR0|B7FFR0_MEDTR Putative uncharacterized protein (Fragment)
OS=Medicago truncatula PE=2 SV=1
Length = 54

Score = 44.3 bits (103), Expect = 0.003
Identities = 21/48 (43%), Positives = 30/48 (62%)
Frame = -2

Query: 315 TAILCNQYLPGTCTNASEFVFFDSVHPXXXXXXXXXXXXXXAGIALVS 172
T++LCN GTC+NA+++VF+DSVHP AGIAL++
Sbjct: 7 TSLLCNPKSLGTCSNATQYVFWDSVHPSEAANQVLADNLIIAGIALIT 54


>tr|A7PQL0|A7PQL0_VITVI Chromosome chr6 scaffold_25, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00022108001
PE=4 SV=1
Length = 351

Score = 43.1 bits (100), Expect = 0.007
Identities = 20/48 (41%), Positives = 26/48 (54%)
Frame = -2

Query: 318 ETAILCNQYLPGTCTNASEFVFFDSVHPXXXXXXXXXXXXXXAGIALV 175
ET+ILCN GTC NA+E+VF+D HP GI+L+
Sbjct: 303 ETSILCNAESVGTCANATEYVFWDGFHPTEAANKILADNLLEDGISLI 350


>tr|Q9AUJ9|Q9AUJ9_ORYSA Putative proline-rich protein OS=Oryza
sativa GN=OSJNBb0072E24.7 PE=4 SV=1
Length = 357

Score = 42.4 bits (98), Expect = 0.012
Identities = 19/49 (38%), Positives = 26/49 (53%)
Frame = -2

Query: 318 ETAILCNQYLPGTCTNASEFVFFDSVHPXXXXXXXXXXXXXXAGIALVS 172
ET++LCNQ GTC NA+ +VF+D HP G+ L+S
Sbjct: 309 ETSVLCNQGAVGTCANATGYVFWDGFHPTDAANKVLADALLLQGLQLIS 357


>tr|Q7Y007|Q7Y007_ORYSJ Os03g0683800 protein OS=Oryza sativa subsp.
japonica GN=OSJNBb0070O09.18 PE=2 SV=1
Length = 357

Score = 42.4 bits (98), Expect = 0.012
Identities = 19/49 (38%), Positives = 26/49 (53%)
Frame = -2

Query: 318 ETAILCNQYLPGTCTNASEFVFFDSVHPXXXXXXXXXXXXXXAGIALVS 172
ET++LCNQ GTC NA+ +VF+D HP G+ L+S
Sbjct: 309 ETSVLCNQGAVGTCANATGYVFWDGFHPTDAANKVLADALLLQGLQLIS 357