BP919574 |
Clone id |
YMU001_000126_F10 |
Library |
YMU01 |
Length |
602 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000126_F10. |
Accession |
BP919574 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL849Contig1 |
Sequence |
GGATTATCAGAAAGGGCCAGACGTCATACAGGCTGCATTGCCAGAGTTCATGCAAGATGA TGTGCAAATGGTTATGCTTGGATCTGGGGATCCTCAAATTGAATCTTGGATGAAGTGGGC TGAAGCCACATATAAAGACAAGTTCAGAGGATGGGTGGGATTCAGTGTTCCTGTGGCACA TCGAATAACTGCAGGGTGCGATATTCTGCTAATGCCTTCTCGATTTGAGCCATGTGGGCT GAATCAGTTGTATGGCATGAGATACGGCACAGTACCTGTAGTTCATTCTACAGGCGGATT ACGGGATACTGTCGAGGACTTCAACCCTTTCGCAAATGCTGGCAAAGGCGGTGGCACAGG TTGGACGTTTTCTCCTCTCTCTAAGGAGGCTATGCTAGGGGCTTTATGGACATCTATCCA GACATATAGAGAGCATAAGACATCTTGGCAAGGTATAATGCGTCGTGGGATGGAACAAGA TGTCTCATGGGATCGTGCAGCTTTGCAATATGAGCAGATATTTGAGTGGTCAAGTATAGA TCCTCCTTATGCTTAGGTTATGGGCTTTTGCTTCTATAAAGCGGATAGCACTTGAAAGTG TG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9FNF2 |
Definition |
sp|Q9FNF2|SSY1_ARATH Soluble starch synthase, chloroplastic/amyloplastic OS=Arabidopsis thaliana |
Align length |
183 |
Score (bit) |
290.0 |
E-value |
3.0e-78 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP919574|Adiantum capillus-veneris mRNA, clone: YMU001_000126_F10. (602 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q9FNF2|SSY1_ARATH Soluble starch synthase, chloroplastic/amyl... 290 3e-78 sp|P93568|SSY1_SOLTU Soluble starch synthase 1, chloroplastic/am... 290 5e-78 sp|Q0DEC8|SSY1_ORYSJ Soluble starch synthase 1, chloroplastic/am... 284 3e-76 sp|A2Y9M4|SSY1_ORYSI Soluble starch synthase 1, chloroplastic/am... 284 3e-76 sp|Q43654|SSY1_WHEAT Starch synthase 1, chloroplastic/amyloplast... 282 8e-76 sp|Q43093|SSG2_PEA Granule-bound starch synthase 2, chloroplasti... 218 1e-56 sp|Q6Z2T8|SSY22_ORYSJ Soluble starch synthase 2-2, chloroplastic... 209 1e-53 sp|Q43847|SSY2_SOLTU Granule-bound starch synthase 2, chloroplas... 206 7e-53 sp|Q7XE48|SSY21_ORYSJ Soluble starch synthase 2-1, chloroplastic... 205 2e-52 sp|P0C586|SSY23_ORYSI Soluble starch synthase 2-3, chloroplastic... 198 2e-50 sp|Q0DDE3|SSY23_ORYSJ Soluble starch synthase 2-3, chloroplastic... 197 3e-50 sp|Q2IM81|GLGA_ANADE Glycogen synthase OS=Anaeromyxobacter dehal... 171 2e-42 sp|Q8DPS3|GLGA_STRR6 Glycogen synthase OS=Streptococcus pneumoni... 162 1e-39 sp|Q97QS5|GLGA_STRPN Glycogen synthase OS=Streptococcus pneumoni... 162 1e-39 sp|Q04KG5|GLGA_STRP2 Glycogen synthase OS=Streptococcus pneumoni... 162 1e-39 sp|A7H6L1|GLGA_ANADF Glycogen synthase OS=Anaeromyxobacter sp. (... 160 6e-39 sp|A8AYH0|GLGA_STRGC Glycogen synthase OS=Streptococcus gordonii... 152 1e-36 sp|Q2RH55|GLGA_MOOTA Glycogen synthase OS=Moorella thermoacetica... 151 2e-36 sp|Q1ILA0|GLGA_ACIBL Glycogen synthase OS=Acidobacteria bacteriu... 151 2e-36 sp|A3CM04|GLGA_STRSV Glycogen synthase OS=Streptococcus sanguini... 150 4e-36 sp|Q81K85|GLGA_BACAN Glycogen synthase OS=Bacillus anthracis GN=... 149 1e-35 sp|Q632H4|GLGA_BACCZ Glycogen synthase OS=Bacillus cereus (strai... 148 2e-35 sp|Q816G8|GLGA_BACCR Glycogen synthase OS=Bacillus cereus (strai... 147 3e-35 sp|Q6HC18|GLGA_BACHK Glycogen synthase OS=Bacillus thuringiensis... 147 4e-35 sp|Q72YJ6|GLGA_BACC1 Glycogen synthase OS=Bacillus cereus (strai... 146 7e-35 sp|Q608L4|GLGA1_METCA Glycogen synthase 1 OS=Methylococcus capsu... 144 3e-34 sp|A4IS20|GLGA_GEOTN Glycogen synthase OS=Geobacillus thermodeni... 144 4e-34 sp|O08328|GLGA_BACST Glycogen synthase OS=Bacillus stearothermop... 142 1e-33 sp|Q8E079|GLGA_STRA5 Glycogen synthase OS=Streptococcus agalacti... 141 2e-33 sp|Q8E5V5|GLGA_STRA3 Glycogen synthase OS=Streptococcus agalacti... 141 2e-33
>sp|Q9FNF2|SSY1_ARATH Soluble starch synthase, chloroplastic/amyloplastic OS=Arabidopsis thaliana GN=At5g24300 PE=2 SV=1 Length = 652
Score = 290 bits (743), Expect = 3e-78 Identities = 128/183 (69%), Positives = 155/183 (84%) Frame = +2
Query: 2 DYQKGPDVIQAALPEFMQDDVQMVMLGSGDPQIESWMKWAEATYKDKFRGWVGFSVPVAH 181 DYQKG D+IQ A P+ M DD+Q VMLGSGDP+ ESWM+ E TY+DKFRGWVGF+VP++H Sbjct: 468 DYQKGIDLIQTAGPDLMVDDIQFVMLGSGDPKYESWMRSMEETYRDKFRGWVGFNVPISH 527
Query: 182 RITAGCDILLMPSRFEPCGLNQLYGMRYGTVPVVHSTGGLRDTVEDFNPFANAGKGGGTG 361 RITAGCDILLMPSRFEPCGLNQLY MRYGT+PVVH TGGLRDTVE+FNP+A G G GTG Sbjct: 528 RITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHGTGGLRDTVENFNPYAEGGAGTGTG 587
Query: 362 WTFSPLSKEAMLGALWTSIQTYREHKTSWQGIMRRGMEQDVSWDRAALQYEQIFEWSSID 541 W F+PLSK++M+ AL + TYRE+K SW+G+MRRGM ++ SW+ AA+QYEQ+F+W +D Sbjct: 588 WVFTPLSKDSMVSALRLAAATYREYKQSWEGLMRRGMTRNYSWENAAVQYEQVFQWVFMD 647
Query: 542 PPY 550 PPY Sbjct: 648 PPY 650
>sp|P93568|SSY1_SOLTU Soluble starch synthase 1, chloroplastic/amyloplastic OS=Solanum tuberosum PE=2 SV=1 Length = 641
Score = 290 bits (741), Expect = 5e-78 Identities = 129/183 (70%), Positives = 154/183 (84%) Frame = +2
Query: 2 DYQKGPDVIQAALPEFMQDDVQMVMLGSGDPQIESWMKWAEATYKDKFRGWVGFSVPVAH 181 DYQKG D+I +A+PE MQ+DVQ+VMLGSG+ Q E WM+ E +KDKFR WVGF+VPV+H Sbjct: 457 DYQKGVDIILSAIPELMQNDVQVVMLGSGEKQYEDWMRHTENLFKDKFRAWVGFNVPVSH 516
Query: 182 RITAGCDILLMPSRFEPCGLNQLYGMRYGTVPVVHSTGGLRDTVEDFNPFANAGKGGGTG 361 RITAGCDILLMPSRFEPCGLNQLY MRYGT+P+VHSTGGLRDTV+DFNP+A G G GTG Sbjct: 517 RITAGCDILLMPSRFEPCGLNQLYAMRYGTIPIVHSTGGLRDTVKDFNPYAQEGIGEGTG 576
Query: 362 WTFSPLSKEAMLGALWTSIQTYREHKTSWQGIMRRGMEQDVSWDRAALQYEQIFEWSSID 541 WTFSPL+ E +L L +I TY EHK+SW+G+MRRGM +D SW+ AA+QYEQ+F W+ ID Sbjct: 577 WTFSPLTSEKLLDTLKLAIGTYTEHKSSWEGLMRRGMGRDYSWENAAIQYEQVFTWAFID 636
Query: 542 PPY 550 PPY Sbjct: 637 PPY 639
>sp|Q0DEC8|SSY1_ORYSJ Soluble starch synthase 1, chloroplastic/amyloplastic OS=Oryza sativa subsp. japonica GN=Os06g0160700 PE=1 SV=1 Length = 641
Score = 284 bits (726), Expect = 3e-76 Identities = 130/183 (71%), Positives = 153/183 (83%) Frame = +2
Query: 2 DYQKGPDVIQAALPEFMQDDVQMVMLGSGDPQIESWMKWAEATYKDKFRGWVGFSVPVAH 181 DYQKG D+I+ A+P+ M+D++Q VMLGSGDP E WM+ E+ Y+DKFRGWVGFSVPV+H Sbjct: 458 DYQKGIDLIKLAIPDLMRDNIQFVMLGSGDPGFEGWMRSTESGYRDKFRGWVGFSVPVSH 517
Query: 182 RITAGCDILLMPSRFEPCGLNQLYGMRYGTVPVVHSTGGLRDTVEDFNPFANAGKGGGTG 361 RITAGCDILLMPSRFEPCGLNQLY M+YGTVPVVH TGGLRDTVE+FNPFA G+ GTG Sbjct: 518 RITAGCDILLMPSRFEPCGLNQLYAMQYGTVPVVHGTGGLRDTVENFNPFAEKGE-QGTG 576
Query: 362 WTFSPLSKEAMLGALWTSIQTYREHKTSWQGIMRRGMEQDVSWDRAALQYEQIFEWSSID 541 W FSPL+ E ML AL +I TYREHK+SW+G+M+RGM D +WD AA QYEQIFEW+ +D Sbjct: 577 WAFSPLTIEKMLWALRMAISTYREHKSSWEGLMKRGMSSDFTWDHAASQYEQIFEWAFMD 636
Query: 542 PPY 550 PY Sbjct: 637 QPY 639
>sp|A2Y9M4|SSY1_ORYSI Soluble starch synthase 1, chloroplastic/amyloplastic OS=Oryza sativa subsp. indica GN=OsI_021017 PE=2 SV=1 Length = 641
Score = 284 bits (726), Expect = 3e-76 Identities = 130/183 (71%), Positives = 153/183 (83%) Frame = +2
Query: 2 DYQKGPDVIQAALPEFMQDDVQMVMLGSGDPQIESWMKWAEATYKDKFRGWVGFSVPVAH 181 DYQKG D+I+ A+P+ M+D++Q VMLGSGDP E WM+ E+ Y+DKFRGWVGFSVPV+H Sbjct: 458 DYQKGIDLIKLAIPDLMRDNIQFVMLGSGDPGFEGWMRSTESGYRDKFRGWVGFSVPVSH 517
Query: 182 RITAGCDILLMPSRFEPCGLNQLYGMRYGTVPVVHSTGGLRDTVEDFNPFANAGKGGGTG 361 RITAGCDILLMPSRFEPCGLNQLY M+YGTVPVVH TGGLRDTVE+FNPFA G+ GTG Sbjct: 518 RITAGCDILLMPSRFEPCGLNQLYAMQYGTVPVVHGTGGLRDTVENFNPFAEKGE-QGTG 576
Query: 362 WTFSPLSKEAMLGALWTSIQTYREHKTSWQGIMRRGMEQDVSWDRAALQYEQIFEWSSID 541 W FSPL+ E ML AL +I TYREHK+SW+G+M+RGM D +WD AA QYEQIFEW+ +D Sbjct: 577 WAFSPLTIEKMLWALRMAISTYREHKSSWEGLMKRGMSSDFTWDHAASQYEQIFEWAFMD 636
Query: 542 PPY 550 PY Sbjct: 637 QPY 639
>sp|Q43654|SSY1_WHEAT Starch synthase 1, chloroplastic/amyloplastic OS=Triticum aestivum GN=WSSI-2 PE=2 SV=2 Length = 647
Score = 282 bits (722), Expect = 8e-76 Identities = 130/183 (71%), Positives = 153/183 (83%) Frame = +2
Query: 2 DYQKGPDVIQAALPEFMQDDVQMVMLGSGDPQIESWMKWAEATYKDKFRGWVGFSVPVAH 181 DYQKG D+I+ A+PE M++DVQ VMLGSGDP E WM+ E++YKDKFRGWVGFSVPV+H Sbjct: 464 DYQKGIDLIKMAIPELMREDVQFVMLGSGDPIFEGWMRSTESSYKDKFRGWVGFSVPVSH 523
Query: 182 RITAGCDILLMPSRFEPCGLNQLYGMRYGTVPVVHSTGGLRDTVEDFNPFANAGKGGGTG 361 RITAGCDILLMPSRFEPCGLNQLY M+YGTVPVVH TGGLRDTVE FNPF G+ GTG Sbjct: 524 RITAGCDILLMPSRFEPCGLNQLYAMQYGTVPVVHGTGGLRDTVETFNPFGAKGE-EGTG 582
Query: 362 WTFSPLSKEAMLGALWTSIQTYREHKTSWQGIMRRGMEQDVSWDRAALQYEQIFEWSSID 541 W FSPL+ + ML AL T++ T+REHK SW+G+M+RGM +D +WD AA QYEQIFEW+ +D Sbjct: 583 WAFSPLTVDKMLWALRTAMSTFREHKPSWEGLMKRGMTKDHTWDHAAEQYEQIFEWAFVD 642
Query: 542 PPY 550 PY Sbjct: 643 QPY 645
>sp|Q43093|SSG2_PEA Granule-bound starch synthase 2, chloroplastic/amyloplastic OS=Pisum sativum PE=1 SV=1 Length = 752
Score = 218 bits (556), Expect = 1e-56 Identities = 103/173 (59%), Positives = 124/173 (71%) Frame = +2
Query: 2 DYQKGPDVIQAALPEFMQDDVQMVMLGSGDPQIESWMKWAEATYKDKFRGWVGFSVPVAH 181 D+QKG D+I A+P M DVQ+VMLG+G +E +K EA + DK R WVGFSV +AH Sbjct: 576 DHQKGVDLIAEAIPWMMSHDVQLVMLGTGRADLEQMLKEFEAQHCDKIRSWVGFSVKMAH 635
Query: 182 RITAGCDILLMPSRFEPCGLNQLYGMRYGTVPVVHSTGGLRDTVEDFNPFANAGKGGGTG 361 RITAG DILLMPSRFEPCGLNQLY M YGTVPVVH GGLRDTV+ FNPF + G G Sbjct: 636 RITAGSDILLMPSRFEPCGLNQLYAMSYGTVPVVHGVGGLRDTVQPFNPFDES----GVG 691
Query: 362 WTFSPLSKEAMLGALWTSIQTYREHKTSWQGIMRRGMEQDVSWDRAALQYEQI 520 WTF ++ ALW + TY+++K SW+GI RGM QD+SWD AA QYE++ Sbjct: 692 WTFDRAEANKLMAALWNCLLTYKDYKKSWEGIQERGMSQDLSWDNAAQQYEEV 744
>sp|Q6Z2T8|SSY22_ORYSJ Soluble starch synthase 2-2, chloroplastic/amyloplastic OS=Oryza sativa subsp. japonica GN=SSII-2 PE=2 SV=2 Length = 694
Score = 209 bits (531), Expect = 1e-53 Identities = 100/173 (57%), Positives = 122/173 (70%) Frame = +2
Query: 2 DYQKGPDVIQAALPEFMQDDVQMVMLGSGDPQIESWMKWAEATYKDKFRGWVGFSVPVAH 181 D+QKG D+I A+P DVQ+VMLG+G P +E ++ E+ + DK RGWVGFSV +AH Sbjct: 518 DHQKGVDIIGDAMPWIAGQDVQVVMLGTGRPDLEEMLRRFESEHNDKVRGWVGFSVQLAH 577
Query: 182 RITAGCDILLMPSRFEPCGLNQLYGMRYGTVPVVHSTGGLRDTVEDFNPFANAGKGGGTG 361 RITAG D+LLMPSRFEPCGLNQLY M YGTVPVVH+ GGLRDTV F+PFA+ G G Sbjct: 578 RITAGADVLLMPSRFEPCGLNQLYAMAYGTVPVVHAVGGLRDTVAPFDPFADT----GLG 633
Query: 362 WTFSPLSKEAMLGALWTSIQTYREHKTSWQGIMRRGMEQDVSWDRAALQYEQI 520 WTF M+ AL + TYR +K SW+G+ RGM QD+SWD AA YE + Sbjct: 634 WTFDRAEANRMIDALGHCLNTYRNYKESWRGLQARGMAQDLSWDHAAELYEDV 686
>sp|Q43847|SSY2_SOLTU Granule-bound starch synthase 2, chloroplastic/amyloplastic OS=Solanum tuberosum GN=SS2 PE=1 SV=3 Length = 767
Score = 206 bits (524), Expect = 7e-53 Identities = 99/173 (57%), Positives = 122/173 (70%) Frame = +2
Query: 2 DYQKGPDVIQAALPEFMQDDVQMVMLGSGDPQIESWMKWAEATYKDKFRGWVGFSVPVAH 181 D QKG D+I A+P M DVQ+VMLG+G +E ++ E + DK RGWVGFSV +H Sbjct: 591 DPQKGVDLIAEAVPWMMGQDVQLVMLGTGRRDLEQMLRQFECQHNDKIRGWVGFSVKTSH 650
Query: 182 RITAGCDILLMPSRFEPCGLNQLYGMRYGTVPVVHSTGGLRDTVEDFNPFANAGKGGGTG 361 RITAG DILLMPSRFEPCGLNQLY M+YGT+PVVH+ GGLRDTV+ F+PF + G G Sbjct: 651 RITAGADILLMPSRFEPCGLNQLYAMKYGTIPVVHAVGGLRDTVQPFDPFNES----GLG 706
Query: 362 WTFSPLSKEAMLGALWTSIQTYREHKTSWQGIMRRGMEQDVSWDRAALQYEQI 520 WTFS ++ AL + TYRE+K SW+GI R M QD+SWD AA YE++ Sbjct: 707 WTFSRAEASQLIHALGNCLLTYREYKKSWEGIQTRCMTQDLSWDNAAQNYEEV 759
>sp|Q7XE48|SSY21_ORYSJ Soluble starch synthase 2-1, chloroplastic/amyloplastic OS=Oryza sativa subsp. japonica GN=SSII-1 PE=2 SV=2 Length = 749
Score = 205 bits (521), Expect = 2e-52 Identities = 94/173 (54%), Positives = 124/173 (71%) Frame = +2
Query: 2 DYQKGPDVIQAALPEFMQDDVQMVMLGSGDPQIESWMKWAEATYKDKFRGWVGFSVPVAH 181 D+QKG D+I A+P DVQ++MLG+G +E ++ E+ + D+ RGWVGFS+ +AH Sbjct: 573 DHQKGVDLIAEAMPWIAGQDVQLIMLGTGRQDLEDTLRRLESQHYDRVRGWVGFSIRLAH 632
Query: 182 RITAGCDILLMPSRFEPCGLNQLYGMRYGTVPVVHSTGGLRDTVEDFNPFANAGKGGGTG 361 R+TAG DILLMPSRFEPCGLNQLY M YGTVPVVH+ GGLRDTVE +NP+ + G G Sbjct: 633 RMTAGADILLMPSRFEPCGLNQLYAMMYGTVPVVHAVGGLRDTVEHYNPYEES----GLG 688
Query: 362 WTFSPLSKEAMLGALWTSIQTYREHKTSWQGIMRRGMEQDVSWDRAALQYEQI 520 WTF ++ AL + TYR ++TSW+G+ +RGM QD+SWD AA YE++ Sbjct: 689 WTFEKAEANRLIDALGHCLNTYRNYRTSWEGLQKRGMMQDLSWDNAAKLYEEV 741
>sp|P0C586|SSY23_ORYSI Soluble starch synthase 2-3, chloroplastic/amyloplastic OS=Oryza sativa subsp. indica GN=SSII-3 PE=1 SV=1 Length = 810
Score = 198 bits (504), Expect = 2e-50 Identities = 96/173 (55%), Positives = 121/173 (69%) Frame = +2
Query: 2 DYQKGPDVIQAALPEFMQDDVQMVMLGSGDPQIESWMKWAEATYKDKFRGWVGFSVPVAH 181 D QKG D+I A+P DVQ+V+LGSG +E ++ EA + K RGWVGFSV +AH Sbjct: 634 DGQKGVDIIGDAMPWIAGQDVQLVLLGSGRRDLEVMLQRFEAQHNSKVRGWVGFSVKMAH 693
Query: 182 RITAGCDILLMPSRFEPCGLNQLYGMRYGTVPVVHSTGGLRDTVEDFNPFANAGKGGGTG 361 RITAG D+L+MPSRFEPCGLNQLY M YGTVPVVH+ GGLRDTV F+PF + G G Sbjct: 694 RITAGADVLVMPSRFEPCGLNQLYAMAYGTVPVVHAVGGLRDTVSAFDPFEDT----GLG 749
Query: 362 WTFSPLSKEAMLGALWTSIQTYREHKTSWQGIMRRGMEQDVSWDRAALQYEQI 520 WTF ++ AL ++TYR++K SW+G+ RGM QD+SWD AA YE++ Sbjct: 750 WTFDRAEPHKLIEALGHCLETYRKYKESWRGLQVRGMSQDLSWDHAAELYEEV 802
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9U0N5 |
Definition |
tr|A9U0N5|A9U0N5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
184 |
Score (bit) |
304.0 |
E-value |
2.0e-81 |
Report |
|