BP919586
Clone id YMU001_000126_G12
Library
Length 466
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000126_G12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
CTTGAATCCAGATGAAAATAATCCACTGAATGATTATCCGGAGGAAGAAGATGATTCAGA
AGAGGAGACAGACAGCACCTTGTCACAGTCTGACGTAGCTGAAGGGAAGCAGGATGTGGT
GTCGAATGCATCAGACGAATATGGTTGCGATACTGCAGAGGAATGGGAAGAGAATTGGGG
TAGTGCTTGTTATTGCTCTGGCGAGGAGTTGGGATAAAGGACGATTTTGATAATGATTCA
TCTTGAGTCAGCTATTATCTGTGCCATACATCTGCATTGAACACTAGAACTGAGCACACT
CTACAACCTGCCCATCAGTTGTGTTTGGAACTGTAACTCTTGGATTTGTGTAAAGCTAGT
CAAGAACATTGAACTTGCATATGAAGGGAGCCAGCTATGTATACCATTAGGGATTTTGTA
ATCATTTCTGGAGTTGAGTAGGTATCACAATCAGCACAGCTGAGTC
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919586|Adiantum capillus-veneris mRNA, clone:
YMU001_000126_G12.
(466 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done

***** No hits found ******


tr_hit_id B2W9J0
Definition tr|B2W9J0|B2W9J0_PYRTR Putative uncharacterized protein OS=Pyrenophora tritici-repentis (strain Pt-1C-BFP)
Align length 61
Score (bit) 33.9
E-value 4.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919586|Adiantum capillus-veneris mRNA, clone:
YMU001_000126_G12.
(466 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B2W9J0|B2W9J0_PYRTR Putative uncharacterized protein OS=Pyren... 34 4.2
tr|B8C9P4|B8C9P4_THAPS Predicted protein OS=Thalassiosira pseudo... 33 5.4

>tr|B2W9J0|B2W9J0_PYRTR Putative uncharacterized protein
OS=Pyrenophora tritici-repentis (strain Pt-1C-BFP)
GN=PTRG_06648 PE=4 SV=1
Length = 578

Score = 33.9 bits (76), Expect = 4.2
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Frame = -2

Query: 435 NSRNDYKIPNGIHSWLPSYASSM---FLTSFTQIQELQFQTQLMGRL*SVLSSSVQCRCM 265
N+ N+Y++P I W P Y S++ + T+ ELQF + + +L+++V+ CM
Sbjct: 182 NTNNEYEVPRDISQWTP-YQSNLKYCLVEQVTETCELQFSFAIAALI--ILANAVKAICM 238

Query: 264 A 262
A
Sbjct: 239 A 239


>tr|B8C9P4|B8C9P4_THAPS Predicted protein OS=Thalassiosira
pseudonana CCMP1335 GN=THAPSDRAFT_8507 PE=4 SV=1
Length = 748

Score = 33.5 bits (75), Expect = 5.4
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = -3

Query: 230 SKSSFIPTPRQSNNKHYPNSLPIPLQYRNHIRLMHSTPHPASLQLRQTVTR 78
++S F PTPR +N+ PN+ PIP ++R + L + H +LR R
Sbjct: 197 TQSQFNPTPRNANSNKDPNT-PIPEEFRRTLILSNIPQHIGRRELRNHFQR 246