BP919587 |
Clone id |
YMU001_000126_H01 |
Library |
YMU01 |
Length |
525 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000126_H01. |
Accession |
BP919587 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL4132Contig1 |
Sequence |
CTTTTGAGAGGTTTGGAAAGCACTTTGTCTCTATGCATTTCACTGATGAGTTTCCGTCAG GAGCGCATAAAAGGATACTTCAGTTCAAATTTACACTTCCCTCGATCAATAGTATGGGGG ATATGTCAAGGTTGATTGCCCTTGTACCATATTATATTGATCTTCTGGGCCGCTATAAGC TCAGTACGCAGCTGCGTGCAAAAGCTGACGCTGCAAGGGCTAAAGTGGCTCAGGAGGCTT TTAAAGAAGCCCAGACTGCTCGCCAGGAAGCTTCACAGAAAAGGAAACAAGAGAGGCGTA AAGCATTCGAAAGTGTTGATTCCAAGCTTTCTGTAGAAGCTATACGCAAGCGAGAAGAGA AGGAGCGTTTGCGGCAGATGAAGAAGTCCGTGCCAAGGATCAAAATATCACGAGCCTAGG TCCATCGATCTATAGCAGGTCACATTGTCTAATGTTGTAGAGCTGTCGACCACGTTTGTC ATTATCATATGCAGACTCCTGATTGCTAATGTTTCGGGCAGTGGT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q94CC0 |
Definition |
sp|Q94CC0|Y5994_ARATH Uncharacterized protein At5g49945 OS=Arabidopsis thaliana |
Align length |
137 |
Score (bit) |
140.0 |
E-value |
5.0e-33 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP919587|Adiantum capillus-veneris mRNA, clone: YMU001_000126_H01. (525 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q94CC0|Y5994_ARATH Uncharacterized protein At5g49945 OS=Arabi... 140 5e-33 sp|Q6AZI2|CCD47_XENLA Coiled-coil domain-containing protein 47 O... 40 0.009 sp|Q66I12|CCD47_DANRE Coiled-coil domain-containing protein 47 O... 39 0.015 sp|Q9UIF8|BAZ2B_HUMAN Bromodomain adjacent to zinc finger domain... 39 0.020 sp|Q9D024|CC47_MOUSE Coiled-coil domain-containing protein 47 OS... 37 0.057 sp|Q5U2X6|CCD47_RAT Coiled-coil domain-containing protein 47 OS=... 37 0.074 sp|Q96A33|CCD47_HUMAN Coiled-coil domain-containing protein 47 O... 37 0.074 sp|Q3ZC50|CCD47_BOVIN Coiled-coil domain-containing protein 47 O... 37 0.074 sp|A5DLJ8|NST1_PICGU Stress response protein NST1 OS=Pichia guil... 35 0.22 sp|P0C204|CCD47_MACFA Coiled-coil domain-containing protein 47 O... 35 0.28 sp|Q13111|CAF1A_HUMAN Chromatin assembly factor 1 subunit A OS=H... 34 0.37 sp|Q6CBW0|NST1_YARLI Stress response protein NST1 OS=Yarrowia li... 34 0.48 sp|Q5ZIA2|MAP7_CHICK Ensconsin OS=Gallus gallus GN=MAP7 PE=2 SV=1 34 0.48 sp|Q92376|KLP1_SCHPO Kinesin-like protein 1 OS=Schizosaccharomyc... 34 0.48 sp|Q9NRL2|BAZ1A_HUMAN Bromodomain adjacent to zinc finger domain... 34 0.48 sp|Q54Y06|Y8487_DICDI Probable cyclin-dependent serine/threonine... 33 0.63 sp|Q5B3C8|NST1_EMENI Stress response protein nst1 OS=Emericella ... 33 0.63 sp|Q6BUT3|NST1_DEBHA Stress response protein NST1 OS=Debaryomyce... 33 0.63 sp|Q7TNY6|GCP60_RAT Golgi resident protein GCP60 OS=Rattus norve... 33 0.63 sp|Q9H3P7|GCP60_HUMAN Golgi resident protein GCP60 OS=Homo sapie... 33 0.63 sp|Q07283|TRHY_HUMAN Trichohyalin OS=Homo sapiens GN=TCHH PE=1 SV=2 33 0.82 sp|Q6FM98|NST1_CANGA Stress response protein NST1 OS=Candida gla... 33 0.82 sp|O88379|BAZ1A_MOUSE Bromodomain adjacent to zinc finger domain... 33 0.82 sp|P34623|YO87_CAEEL Uncharacterized protein ZK1236.7 OS=Caenorh... 32 1.4 sp|P13505|CALD1_MELGA Caldesmon, smooth muscle (Fragment) OS=Mel... 32 1.4 sp|P12957|CALD1_CHICK Caldesmon OS=Gallus gallus GN=CALD1 PE=1 SV=2 32 1.4 sp|Q9QWF0|CAF1A_MOUSE Chromatin assembly factor 1 subunit A OS=M... 32 1.4 sp|Q6ZNF1|YF017_HUMAN Uncharacterized protein FLJ16163 OS=Homo s... 32 1.8 sp|Q02040|SF17A_HUMAN Splicing factor, arginine/serine-rich 17A ... 32 1.8 sp|Q8BMP6|GCP60_MOUSE Golgi resident protein GCP60 OS=Mus muscul... 32 1.8
>sp|Q94CC0|Y5994_ARATH Uncharacterized protein At5g49945 OS=Arabidopsis thaliana GN=At5g49945 PE=1 SV=1 Length = 480
Score = 140 bits (352), Expect = 5e-33 Identities = 66/137 (48%), Positives = 97/137 (70%) Frame = +3
Query: 6 ERFGKHFVSMHFTDEFPSGAHKRILQFKFTLPSINSMGDMSRLIALVPYYIDLLGRYKLS 185 +++GK+F+SMH +D+ P G HK+++ FKF+LP M D+ RL+AL+PYYIDL+GRY+LS Sbjct: 344 DKYGKNFMSMHISDQHP-GKHKKMMLFKFSLPDAKHMDDIVRLVALIPYYIDLVGRYRLS 402
Query: 186 TQLXXXXXXXXXXXXXXXFKEAQTARQEASQKRKQERRKAFESVDSKLSVEAIRKREEKE 365 +Q +KE ARQEA QK+K E++K E ++K+S E IRK+E KE Sbjct: 403 SQARNKTESGRQKAAEEAYKELHNARQEALQKKKAEKKKMMEEAEAKMSAEVIRKKEAKE 462
Query: 366 RLRQMKKSVPRIKISRA 416 R RQ+KK+VP++K+SR+ Sbjct: 463 RARQVKKAVPKMKMSRS 479
>sp|Q6AZI2|CCD47_XENLA Coiled-coil domain-containing protein 47 OS=Xenopus laevis GN=ccdc47 PE=2 SV=1 Length = 489
Score = 39.7 bits (91), Expect = 0.009 Identities = 38/153 (24%), Positives = 68/153 (44%), Gaps = 28/153 (18%) Frame = +3
Query: 30 SMHFTDEFPSGAH--------------KRILQFKFTLP-----SINSMGDMSRLIALVPY 152 S+HF+D+F SG K+ L F F +P S+ M + L+ +V Y Sbjct: 336 SIHFSDQF-SGPKIMQEEGQPLKLPETKKTLLFTFNVPGSGNASVKDMEALLPLMNMVIY 394
Query: 153 YIDLLGRYKLSTQLXXXXXXXXXXXXXXXFKEAQTARQEASQKRKQERRKAFES------ 314 ID + +++L+ + K RQEA+Q R++E+++A + Sbjct: 395 SIDKVKKFRLNREGKQKADKNRARVEENFLKITHVQRQEAAQTRREEKKRAEKERIMNEE 454
Query: 315 --VDSKLSVEAIRKREEKE-RLRQMKKSVPRIK 404 + EA ++RE+K+ +QMK ++K Sbjct: 455 DPEKQRRLEEAAQRREQKKIEKKQMKMKQIKVK 487
>sp|Q66I12|CCD47_DANRE Coiled-coil domain-containing protein 47 OS=Danio rerio GN=ccdc47 PE=2 SV=1 Length = 486
Score = 38.9 bits (89), Expect = 0.015 Identities = 39/153 (25%), Positives = 68/153 (44%), Gaps = 28/153 (18%) Frame = +3
Query: 30 SMHFTDEFPSGAH--------------KRILQFKFTLPSINSMG--DMSRLIAL---VPY 152 S+HF+D+F SG K+ L F F +P + + DM L+ L V Y Sbjct: 333 SIHFSDQF-SGPKVMQEEGQPLKLPETKKTLLFTFNVPGMGNTSPKDMDSLLPLMNMVIY 391
Query: 153 YIDLLGRYKLSTQLXXXXXXXXXXXXXXXFKEAQTARQEASQKRKQERRKAFES------ 314 ID + + +L+ + K+ RQEA+Q R++E+++A + Sbjct: 392 SIDKVKKLRLNREGKQKADRNRARVEENFLKQTHAQRQEAAQTRREEKKRAEKERIMNEE 451
Query: 315 --VDSKLSVEAIRKREEKE-RLRQMKKSVPRIK 404 + EA ++RE+K+ +QMK ++K Sbjct: 452 DPERQRRLEEAAQRREQKKMEKKQMKMKQIKVK 484
>sp|Q9UIF8|BAZ2B_HUMAN Bromodomain adjacent to zinc finger domain protein 2B OS=Homo sapiens GN=BAZ2B PE=1 SV=2 Length = 1972
Score = 38.5 bits (88), Expect = 0.020 Identities = 21/57 (36%), Positives = 33/57 (57%) Frame = +3
Query: 243 KEAQTARQEASQKRKQERRKAFESVDSKLSVEAIRKREEKERLRQMKKSVPRIKISR 413 KE + RQ+A + QER + + + ++EA +K EEKERL+Q K+ R+ R Sbjct: 792 KEKEMRRQQAVLLKHQERERRRQHMMLMKAMEARKKAEEKERLKQEKRDEKRLNKER 848
>sp|Q9D024|CC47_MOUSE Coiled-coil domain-containing protein 47 OS=Mus musculus GN=Ccdc47 PE=2 SV=2 Length = 483
Score = 37.0 bits (84), Expect = 0.057 Identities = 38/153 (24%), Positives = 65/153 (42%), Gaps = 28/153 (18%) Frame = +3
Query: 30 SMHFTDEFPSGAH--------------KRILQFKFTLPSINS-----MGDMSRLIALVPY 152 S+HF+D+F SG KR L F F +P + M + L+ +V Y Sbjct: 330 SVHFSDQF-SGPKIMQEEGQPLKLPDTKRTLLFTFNVPGSGNTYPKDMESLLPLMNMVIY 388
Query: 153 YIDLLGRYKLSTQLXXXXXXXXXXXXXXXFKEAQTARQEASQKRKQERRKAFES------ 314 ID +++L+ + K RQEA+Q R++E+++A + Sbjct: 389 SIDKAKKFRLNREGKQKADKNRARVEENFLKLTHVQRQEAAQSRREEKKRAEKERIMNEE 448
Query: 315 --VDSKLSVEAIRKREEKE-RLRQMKKSVPRIK 404 + EA +RE+K+ +QMK ++K Sbjct: 449 DPEKQRRLEEAALRREQKKLEKKQMKMKQIKVK 481
>sp|Q5U2X6|CCD47_RAT Coiled-coil domain-containing protein 47 OS=Rattus norvegicus GN=Ccdc47 PE=2 SV=1 Length = 483
Score = 36.6 bits (83), Expect = 0.074 Identities = 40/153 (26%), Positives = 65/153 (42%), Gaps = 28/153 (18%) Frame = +3
Query: 30 SMHFTDEFPSGAH--------------KRILQFKFTLPSINSM--GDMSRLIAL---VPY 152 S+HF+D+F SG KR L F F +P + DM L+ L V Y Sbjct: 330 SVHFSDQF-SGPKIMQEEGQPLKLPDTKRTLLFTFNVPGSGNTYPKDMEALLPLMNMVIY 388
Query: 153 YIDLLGRYKLSTQLXXXXXXXXXXXXXXXFKEAQTARQEASQKRKQERRKAFES------ 314 ID +++L+ + K RQEA+Q R++E+++A + Sbjct: 389 SIDKAKKFRLNREGKQKADKNRARVEENFLKLTHVQRQEAAQSRREEKKRAEKERIMNEE 448
Query: 315 --VDSKLSVEAIRKREEKE-RLRQMKKSVPRIK 404 + EA +RE+K+ +QMK ++K Sbjct: 449 DPEKQRRLEEAALRREQKKLEKKQMKMKQIKVK 481
>sp|Q96A33|CCD47_HUMAN Coiled-coil domain-containing protein 47 OS=Homo sapiens GN=CCDC47 PE=1 SV=1 Length = 483
Score = 36.6 bits (83), Expect = 0.074 Identities = 40/153 (26%), Positives = 65/153 (42%), Gaps = 28/153 (18%) Frame = +3
Query: 30 SMHFTDEFPSGAH--------------KRILQFKFTLPSINSM--GDMSRLIAL---VPY 152 S+HF+D+F SG KR L F F +P + DM L+ L V Y Sbjct: 330 SVHFSDQF-SGPKIMQEEGQPLKLPDTKRTLLFTFNVPGSGNTYPKDMEALLPLMNMVIY 388
Query: 153 YIDLLGRYKLSTQLXXXXXXXXXXXXXXXFKEAQTARQEASQKRKQERRKAFES------ 314 ID +++L+ + K RQEA+Q R++E+++A + Sbjct: 389 SIDKAKKFRLNREGKQKADKNRARVEENFLKLTHVQRQEAAQSRREEKKRAEKERIMNEE 448
Query: 315 --VDSKLSVEAIRKREEKE-RLRQMKKSVPRIK 404 + EA +RE+K+ +QMK ++K Sbjct: 449 DPEKQRRLEEAALRREQKKLEKKQMKMKQIKVK 481
>sp|Q3ZC50|CCD47_BOVIN Coiled-coil domain-containing protein 47 OS=Bos taurus GN=CCDC47 PE=2 SV=1 Length = 483
Score = 36.6 bits (83), Expect = 0.074 Identities = 40/153 (26%), Positives = 65/153 (42%), Gaps = 28/153 (18%) Frame = +3
Query: 30 SMHFTDEFPSGAH--------------KRILQFKFTLPSINSM--GDMSRLIAL---VPY 152 S+HF+D+F SG KR L F F +P + DM L+ L V Y Sbjct: 330 SIHFSDQF-SGPKIMQEEGQPLKLPDTKRTLLFTFNVPGSGNTYPKDMEALLPLMNMVIY 388
Query: 153 YIDLLGRYKLSTQLXXXXXXXXXXXXXXXFKEAQTARQEASQKRKQERRKAFES------ 314 ID +++L+ + K RQEA+Q R++E+++A + Sbjct: 389 SIDKAKKFRLNREGKQKADKNRARVEENFLKLTHVQRQEAAQSRREEKKRAEKERIMNEE 448
Query: 315 --VDSKLSVEAIRKREEKE-RLRQMKKSVPRIK 404 + EA +RE+K+ +QMK ++K Sbjct: 449 DPEKQRRLEEAALRREQKKLEKKQMKMKQIKVK 481
>sp|A5DLJ8|NST1_PICGU Stress response protein NST1 OS=Pichia guilliermondii GN=NST1 PE=3 SV=2 Length = 1107
Score = 35.0 bits (79), Expect = 0.22 Identities = 20/52 (38%), Positives = 33/52 (63%), Gaps = 1/52 (1%) Frame = +3
Query: 246 EAQTARQEASQKRKQERRKAFESVDSKLSVEAIRKREEKERL-RQMKKSVPR 398 E + ++EA QK+++E+RK E + K E +K+EEKER R++K+ R Sbjct: 659 EQKRRKEEARQKKEEEKRKRIEELRLKKEAEK-KKQEEKERKERELKEKKER 709
>sp|P0C204|CCD47_MACFA Coiled-coil domain-containing protein 47 OS=Macaca fascicularis GN=CCDC47 PE=2 SV=1 Length = 483
Score = 34.7 bits (78), Expect = 0.28 Identities = 33/126 (26%), Positives = 55/126 (43%), Gaps = 14/126 (11%) Frame = +3
Query: 69 KRILQFKFTLPSINSM--GDMSRLIAL---VPYYIDLLGRYKLSTQLXXXXXXXXXXXXX 233 KR L F F +P + DM L+ L V Y ID +++L+ + Sbjct: 356 KRTLLFTFNVPGSGNTYPKDMEALLPLMNMVIYSIDKAKKFRLNREGKQKADKNRARVEE 415
Query: 234 XXFKEAQTARQEASQKRKQERRKAFES--------VDSKLSVEAIRKREEKE-RLRQMKK 386 K RQEA+Q R++E+++A + + EA +RE+K+ +QMK Sbjct: 416 NFLKLTHVQRQEAAQSRREEKKRAEKERIMNEEDPEKQRRLEEAALRREQKKLEKKQMKM 475
Query: 387 SVPRIK 404 ++K Sbjct: 476 KQIKVK 481
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8LPZ1 |
Definition |
tr|B8LPZ1|B8LPZ1_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
137 |
Score (bit) |
165.0 |
E-value |
1.0e-39 |
Report |
|