BP919595 |
Clone id |
YMU001_000127_A01 |
Library |
YMU01 |
Length |
525 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000127_A01. |
Accession |
BP919595 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
TGGCCCAAAAAACGTGGAAGATACTGGCGTGCCAAAAGTGTACAGAATCCCTTAATTTGC GCAAGCTTTTTAGGTAAGTGTCTTTAGGAACTCACGCTTTTGGAAGTGACAGCTTTTGGG GCTCGCTTTTAGGCATCCCATGTAAGTTTATAAGGAGCCCTTGTGCCATTCTCTGGTAAA CAATAGCAACGTCCCACAGAGTCAGACCCTTTGGAGTTGTAGCTGTGTGATTGGCAATAA AGAAAGAAATATCGGAAGGGGAGGCACTGCATCTGGGAGCAGGAGCCATCCCTTGTTGAC TCTCCCCTTCTCTCTCTCTATTTCATGCTTTGTTGTTGCAGTTTCTTTATATTTCTCGCT TGGAGTGTCCAAGCCAATTACCCTTGCTGGACCCTCTTTAGGTGATGCTTTTTAGCAATT ACTTGGGGGTTGACCCGAGGTCTCCTCTCTATCCTCCATGGCATCCATTGGCGGTGGTGA TTCTTCCTTGCTGGTGGTTACCCTGCTGGTCTCAATGCCGATCTT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q3BR52 |
Definition |
sp|Q3BR52|NFI_XANC5 Endonuclease V OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) |
Align length |
64 |
Score (bit) |
35.4 |
E-value |
0.17 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP919595|Adiantum capillus-veneris mRNA, clone: YMU001_000127_A01. (525 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q3BR52|NFI_XANC5 Endonuclease V OS=Xanthomonas campestris pv.... 35 0.17 sp|Q8PIM0|NFI_XANAC Endonuclease V OS=Xanthomonas axonopodis pv.... 33 1.1 sp|Q8BMJ2|SYLC_MOUSE Leucyl-tRNA synthetase, cytoplasmic OS=Mus ... 32 1.8 sp|Q8P7A0|NFI_XANCP Endonuclease V OS=Xanthomonas campestris pv.... 32 2.4 sp|Q4UWV2|NFI_XANC8 Endonuclease V OS=Xanthomonas campestris pv.... 32 2.4 sp|P08553|NFM_MOUSE Neurofilament medium polypeptide OS=Mus musc... 31 4.1 sp|Q8NBQ7|AQP11_HUMAN Aquaporin-11 OS=Homo sapiens GN=AQP11 PE=2... 31 4.1 sp|Q2HHH2|YD156_CHAGB WD repeat-containing protein CHGG_00332 OS... 30 5.4 sp|Q8BHH1|AQP11_MOUSE Aquaporin-11 OS=Mus musculus GN=Aqp11 PE=2... 30 5.4 sp|Q6LPD9|SERC_PHOPR Phosphoserine aminotransferase OS=Photobact... 30 7.0 sp|Q870L3|MIRC_EMENI Siderophore iron transporter mirC OS=Emeric... 30 7.1
>sp|Q3BR52|NFI_XANC5 Endonuclease V OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=nfi PE=3 SV=1 Length = 237
Score = 35.4 bits (80), Expect = 0.17 Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 3/64 (4%) Frame = -2
Query: 458 WRIERRPRVNPQVIAKKHHLKRVQQG*LAWTLQARNIKKLQQQSM---K*RERRGESTRD 288 W + +PR NP +++ H + QG L WTL+ +L + + + RRGE T Sbjct: 172 WALRSKPRCNPLIVSPGHCVS--MQGALDWTLRTLRAYRLPEPTRLADRLASRRGEVTVP 229
Query: 287 GSCS 276 +CS Sbjct: 230 AACS 233
>sp|Q8PIM0|NFI_XANAC Endonuclease V OS=Xanthomonas axonopodis pv. citri GN=nfi PE=3 SV=1 Length = 237
Score = 32.7 bits (73), Expect = 1.1 Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 3/58 (5%) Frame = -2
Query: 458 WRIERRPRVNPQVIAKKHHLKRVQQG*LAWTLQARNIKKLQQQSM---K*RERRGEST 294 W + +PR NP +++ H + QG L WTL+ +L + + + RRGE T Sbjct: 172 WALRSKPRCNPLIVSPGHRVS--MQGALDWTLRTLRAYRLPEPTRLADRLASRRGEVT 227
>sp|Q8BMJ2|SYLC_MOUSE Leucyl-tRNA synthetase, cytoplasmic OS=Mus musculus GN=Lars PE=2 SV=2 Length = 1178
Score = 32.0 bits (71), Expect = 1.8 Identities = 19/55 (34%), Positives = 29/55 (52%) Frame = -3
Query: 259 PSDISFFIANHTATTPKGLTLWDVAIVYQRMAQGLLINLHGMPKSEPQKLSLPKA 95 P+ +S++I NH A P+ W V++ R LL+N M KS L+L +A Sbjct: 681 PNHLSYYIYNHVAMWPEQSDKWPVSV---RANGHLLLNSEKMSKSTGNFLTLSQA 732
>sp|Q8P7A0|NFI_XANCP Endonuclease V OS=Xanthomonas campestris pv. campestris GN=nfi PE=3 SV=1 Length = 236
Score = 31.6 bits (70), Expect = 2.4 Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Frame = -2
Query: 458 WRIERRPRVNPQVIAKKHHLKRVQQG*LAWTLQARNIKKLQQQSM---K*RERRGE 300 W + +PR NP +++ H + QG L WTL+ +L + + + RRGE Sbjct: 173 WALRSKPRCNPLIVSPGHRVS--MQGALDWTLRTLRAYRLPEPTRLADRLASRRGE 226
>sp|Q4UWV2|NFI_XANC8 Endonuclease V OS=Xanthomonas campestris pv. campestris (strain 8004) GN=nfi PE=3 SV=1 Length = 236
Score = 31.6 bits (70), Expect = 2.4 Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Frame = -2
Query: 458 WRIERRPRVNPQVIAKKHHLKRVQQG*LAWTLQARNIKKLQQQSM---K*RERRGE 300 W + +PR NP +++ H + QG L WTL+ +L + + + RRGE Sbjct: 173 WALRSKPRCNPLIVSPGHRVS--MQGALDWTLRTLRAYRLPEPTRLADRLASRRGE 226
>sp|P08553|NFM_MOUSE Neurofilament medium polypeptide OS=Mus musculus GN=Nefm PE=1 SV=4 Length = 848
Score = 30.8 bits (68), Expect = 4.1 Identities = 21/80 (26%), Positives = 34/80 (42%), Gaps = 4/80 (5%) Frame = -1
Query: 516 IETSRVTTSKEESPPPMDAMEDREETSGQPPSNC*KASPKEGPARVIGL----DTPSEKY 349 ++ S +KEE P P + ++++ E G SP+E I + + E+ Sbjct: 686 VKVSLEKDTKEEKPQPQEKVKEKAEEEGGSEEEGSDRSPQESKKEDIAINGEVEGKEEEE 745
Query: 348 KETATTKHEIEREKGRVNKG 289 +ET E EKG V G Sbjct: 746 QETQEKGSGREEEKGVVTNG 765
>sp|Q8NBQ7|AQP11_HUMAN Aquaporin-11 OS=Homo sapiens GN=AQP11 PE=2 SV=1 Length = 271
Score = 30.8 bits (68), Expect = 4.1 Identities = 14/38 (36%), Positives = 19/38 (50%) Frame = +1
Query: 322 FMLCCCSFFIFLAWSVQANYPCWTLFR*CFLAITWGLT 435 F LCCC+ + L +P WTL F ++ GLT Sbjct: 55 FQLCCCTHELQLLSEQHPAHPTWTLTLVYFFSLVHGLT 92
>sp|Q2HHH2|YD156_CHAGB WD repeat-containing protein CHGG_00332 OS=Chaetomium globosum GN=CHGG_00332 PE=3 SV=1 Length = 524
Score = 30.4 bits (67), Expect = 5.4 Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 1/77 (1%) Frame = -1
Query: 519 GIETSRVTTSKEESPP-PMDAMEDREETSGQPPSNC*KASPKEGPARVIGLDTPSEKYKE 343 GI T+ + +PP P A R + + P A P +R+ GLD ++ K Sbjct: 29 GISTTAEKIIPKPAPPKPKRASAPRAK---REPVKRETARPTRQSSRLAGLDADADTLKR 85
Query: 342 TATTKHEIEREKGRVNK 292 A + E+E EK + K Sbjct: 86 KAEVEAEVEAEKAKAKK 102
>sp|Q8BHH1|AQP11_MOUSE Aquaporin-11 OS=Mus musculus GN=Aqp11 PE=2 SV=1 Length = 271
Score = 30.4 bits (67), Expect = 5.4 Identities = 13/38 (34%), Positives = 20/38 (52%) Frame = +1
Query: 322 FMLCCCSFFIFLAWSVQANYPCWTLFR*CFLAITWGLT 435 F LCCC+ + + + +P WTL F ++ GLT Sbjct: 55 FQLCCCTHELQVLSEQDSAHPTWTLTLIYFFSLVHGLT 92
>sp|Q6LPD9|SERC_PHOPR Phosphoserine aminotransferase OS=Photobacterium profundum GN=serC PE=3 SV=1 Length = 360
Score = 30.0 bits (66), Expect = 7.0 Identities = 26/83 (31%), Positives = 35/83 (42%), Gaps = 3/83 (3%) Frame = -3
Query: 463 CHGG*RGDLGSTPK*LLKSIT*RGSSKGNWLGHSK-REI*RNCNNKA*NREREGESQQGM 287 CHGG RG + P LL G + HS E + C+ A + E E ++ + Sbjct: 72 CHGGARGQFAAVPMNLLGDANTADYMDGGYWAHSAIAEAKKYCSPNAVDITCEREGKKAI 131
Query: 286 APAPRCSASPSDISF--FIANHT 224 PA S S D +F F N T Sbjct: 132 LPAREWSLS-DDAAFVHFCPNET 153
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B6NSQ5 |
Definition |
tr|B6NSQ5|B6NSQ5_BRAFL Putative uncharacterized protein OS=Branchiostoma floridae |
Align length |
64 |
Score (bit) |
35.0 |
E-value |
2.3 |
Report |
|