BP919595
Clone id YMU001_000127_A01
Library
Length 525
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000127_A01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TGGCCCAAAAAACGTGGAAGATACTGGCGTGCCAAAAGTGTACAGAATCCCTTAATTTGC
GCAAGCTTTTTAGGTAAGTGTCTTTAGGAACTCACGCTTTTGGAAGTGACAGCTTTTGGG
GCTCGCTTTTAGGCATCCCATGTAAGTTTATAAGGAGCCCTTGTGCCATTCTCTGGTAAA
CAATAGCAACGTCCCACAGAGTCAGACCCTTTGGAGTTGTAGCTGTGTGATTGGCAATAA
AGAAAGAAATATCGGAAGGGGAGGCACTGCATCTGGGAGCAGGAGCCATCCCTTGTTGAC
TCTCCCCTTCTCTCTCTCTATTTCATGCTTTGTTGTTGCAGTTTCTTTATATTTCTCGCT
TGGAGTGTCCAAGCCAATTACCCTTGCTGGACCCTCTTTAGGTGATGCTTTTTAGCAATT
ACTTGGGGGTTGACCCGAGGTCTCCTCTCTATCCTCCATGGCATCCATTGGCGGTGGTGA
TTCTTCCTTGCTGGTGGTTACCCTGCTGGTCTCAATGCCGATCTT
■■Homology search results ■■ -
sp_hit_id Q3BR52
Definition sp|Q3BR52|NFI_XANC5 Endonuclease V OS=Xanthomonas campestris pv. vesicatoria (strain 85-10)
Align length 64
Score (bit) 35.4
E-value 0.17
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919595|Adiantum capillus-veneris mRNA, clone:
YMU001_000127_A01.
(525 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q3BR52|NFI_XANC5 Endonuclease V OS=Xanthomonas campestris pv.... 35 0.17
sp|Q8PIM0|NFI_XANAC Endonuclease V OS=Xanthomonas axonopodis pv.... 33 1.1
sp|Q8BMJ2|SYLC_MOUSE Leucyl-tRNA synthetase, cytoplasmic OS=Mus ... 32 1.8
sp|Q8P7A0|NFI_XANCP Endonuclease V OS=Xanthomonas campestris pv.... 32 2.4
sp|Q4UWV2|NFI_XANC8 Endonuclease V OS=Xanthomonas campestris pv.... 32 2.4
sp|P08553|NFM_MOUSE Neurofilament medium polypeptide OS=Mus musc... 31 4.1
sp|Q8NBQ7|AQP11_HUMAN Aquaporin-11 OS=Homo sapiens GN=AQP11 PE=2... 31 4.1
sp|Q2HHH2|YD156_CHAGB WD repeat-containing protein CHGG_00332 OS... 30 5.4
sp|Q8BHH1|AQP11_MOUSE Aquaporin-11 OS=Mus musculus GN=Aqp11 PE=2... 30 5.4
sp|Q6LPD9|SERC_PHOPR Phosphoserine aminotransferase OS=Photobact... 30 7.0
sp|Q870L3|MIRC_EMENI Siderophore iron transporter mirC OS=Emeric... 30 7.1

>sp|Q3BR52|NFI_XANC5 Endonuclease V OS=Xanthomonas campestris pv.
vesicatoria (strain 85-10) GN=nfi PE=3 SV=1
Length = 237

Score = 35.4 bits (80), Expect = 0.17
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Frame = -2

Query: 458 WRIERRPRVNPQVIAKKHHLKRVQQG*LAWTLQARNIKKLQQQSM---K*RERRGESTRD 288
W + +PR NP +++ H + QG L WTL+ +L + + + RRGE T
Sbjct: 172 WALRSKPRCNPLIVSPGHCVS--MQGALDWTLRTLRAYRLPEPTRLADRLASRRGEVTVP 229

Query: 287 GSCS 276
+CS
Sbjct: 230 AACS 233


>sp|Q8PIM0|NFI_XANAC Endonuclease V OS=Xanthomonas axonopodis pv.
citri GN=nfi PE=3 SV=1
Length = 237

Score = 32.7 bits (73), Expect = 1.1
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Frame = -2

Query: 458 WRIERRPRVNPQVIAKKHHLKRVQQG*LAWTLQARNIKKLQQQSM---K*RERRGEST 294
W + +PR NP +++ H + QG L WTL+ +L + + + RRGE T
Sbjct: 172 WALRSKPRCNPLIVSPGHRVS--MQGALDWTLRTLRAYRLPEPTRLADRLASRRGEVT 227


>sp|Q8BMJ2|SYLC_MOUSE Leucyl-tRNA synthetase, cytoplasmic OS=Mus
musculus GN=Lars PE=2 SV=2
Length = 1178

Score = 32.0 bits (71), Expect = 1.8
Identities = 19/55 (34%), Positives = 29/55 (52%)
Frame = -3

Query: 259 PSDISFFIANHTATTPKGLTLWDVAIVYQRMAQGLLINLHGMPKSEPQKLSLPKA 95
P+ +S++I NH A P+ W V++ R LL+N M KS L+L +A
Sbjct: 681 PNHLSYYIYNHVAMWPEQSDKWPVSV---RANGHLLLNSEKMSKSTGNFLTLSQA 732


>sp|Q8P7A0|NFI_XANCP Endonuclease V OS=Xanthomonas campestris pv.
campestris GN=nfi PE=3 SV=1
Length = 236

Score = 31.6 bits (70), Expect = 2.4
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Frame = -2

Query: 458 WRIERRPRVNPQVIAKKHHLKRVQQG*LAWTLQARNIKKLQQQSM---K*RERRGE 300
W + +PR NP +++ H + QG L WTL+ +L + + + RRGE
Sbjct: 173 WALRSKPRCNPLIVSPGHRVS--MQGALDWTLRTLRAYRLPEPTRLADRLASRRGE 226


>sp|Q4UWV2|NFI_XANC8 Endonuclease V OS=Xanthomonas campestris pv.
campestris (strain 8004) GN=nfi PE=3 SV=1
Length = 236

Score = 31.6 bits (70), Expect = 2.4
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Frame = -2

Query: 458 WRIERRPRVNPQVIAKKHHLKRVQQG*LAWTLQARNIKKLQQQSM---K*RERRGE 300
W + +PR NP +++ H + QG L WTL+ +L + + + RRGE
Sbjct: 173 WALRSKPRCNPLIVSPGHRVS--MQGALDWTLRTLRAYRLPEPTRLADRLASRRGE 226


>sp|P08553|NFM_MOUSE Neurofilament medium polypeptide OS=Mus
musculus GN=Nefm PE=1 SV=4
Length = 848

Score = 30.8 bits (68), Expect = 4.1
Identities = 21/80 (26%), Positives = 34/80 (42%), Gaps = 4/80 (5%)
Frame = -1

Query: 516 IETSRVTTSKEESPPPMDAMEDREETSGQPPSNC*KASPKEGPARVIGL----DTPSEKY 349
++ S +KEE P P + ++++ E G SP+E I + + E+
Sbjct: 686 VKVSLEKDTKEEKPQPQEKVKEKAEEEGGSEEEGSDRSPQESKKEDIAINGEVEGKEEEE 745

Query: 348 KETATTKHEIEREKGRVNKG 289
+ET E EKG V G
Sbjct: 746 QETQEKGSGREEEKGVVTNG 765


>sp|Q8NBQ7|AQP11_HUMAN Aquaporin-11 OS=Homo sapiens GN=AQP11 PE=2
SV=1
Length = 271

Score = 30.8 bits (68), Expect = 4.1
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +1

Query: 322 FMLCCCSFFIFLAWSVQANYPCWTLFR*CFLAITWGLT 435
F LCCC+ + L +P WTL F ++ GLT
Sbjct: 55 FQLCCCTHELQLLSEQHPAHPTWTLTLVYFFSLVHGLT 92


>sp|Q2HHH2|YD156_CHAGB WD repeat-containing protein CHGG_00332
OS=Chaetomium globosum GN=CHGG_00332 PE=3 SV=1
Length = 524

Score = 30.4 bits (67), Expect = 5.4
Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Frame = -1

Query: 519 GIETSRVTTSKEESPP-PMDAMEDREETSGQPPSNC*KASPKEGPARVIGLDTPSEKYKE 343
GI T+ + +PP P A R + + P A P +R+ GLD ++ K
Sbjct: 29 GISTTAEKIIPKPAPPKPKRASAPRAK---REPVKRETARPTRQSSRLAGLDADADTLKR 85

Query: 342 TATTKHEIEREKGRVNK 292
A + E+E EK + K
Sbjct: 86 KAEVEAEVEAEKAKAKK 102


>sp|Q8BHH1|AQP11_MOUSE Aquaporin-11 OS=Mus musculus GN=Aqp11 PE=2
SV=1
Length = 271

Score = 30.4 bits (67), Expect = 5.4
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +1

Query: 322 FMLCCCSFFIFLAWSVQANYPCWTLFR*CFLAITWGLT 435
F LCCC+ + + + +P WTL F ++ GLT
Sbjct: 55 FQLCCCTHELQVLSEQDSAHPTWTLTLIYFFSLVHGLT 92


>sp|Q6LPD9|SERC_PHOPR Phosphoserine aminotransferase
OS=Photobacterium profundum GN=serC PE=3 SV=1
Length = 360

Score = 30.0 bits (66), Expect = 7.0
Identities = 26/83 (31%), Positives = 35/83 (42%), Gaps = 3/83 (3%)
Frame = -3

Query: 463 CHGG*RGDLGSTPK*LLKSIT*RGSSKGNWLGHSK-REI*RNCNNKA*NREREGESQQGM 287
CHGG RG + P LL G + HS E + C+ A + E E ++ +
Sbjct: 72 CHGGARGQFAAVPMNLLGDANTADYMDGGYWAHSAIAEAKKYCSPNAVDITCEREGKKAI 131

Query: 286 APAPRCSASPSDISF--FIANHT 224
PA S S D +F F N T
Sbjct: 132 LPAREWSLS-DDAAFVHFCPNET 153


tr_hit_id B6NSQ5
Definition tr|B6NSQ5|B6NSQ5_BRAFL Putative uncharacterized protein OS=Branchiostoma floridae
Align length 64
Score (bit) 35.0
E-value 2.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919595|Adiantum capillus-veneris mRNA, clone:
YMU001_000127_A01.
(525 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B6NSQ5|B6NSQ5_BRAFL Putative uncharacterized protein OS=Branc... 35 2.3
tr|B5DHZ0|B5DHZ0_DROPS GA25805 OS=Drosophila pseudoobscura pseud... 35 3.0
tr|A6QLR2|A6QLR2_BOVIN LARS protein OS=Bos taurus GN=LARS PE=2 SV=1 34 5.1
tr|B6PDA9|B6PDA9_BRAFL Putative uncharacterized protein OS=Branc... 34 5.2
tr|Q6AX83|Q6AX83_XENLA MGC82093 protein OS=Xenopus laevis GN=lar... 33 6.6
tr|Q5EB29|Q5EB29_XENTR MGC97760 protein OS=Xenopus tropicalis GN... 33 6.6
tr|B6QET6|B6QET6_PENMA Putative uncharacterized protein OS=Penic... 33 6.7
tr|B6P275|B6P275_BRAFL Putative uncharacterized protein OS=Branc... 33 8.6
tr|B4NRH2|B4NRH2_DROWI GK18648 OS=Drosophila willistoni GN=GK186... 33 8.6
tr|A4RGQ6|A4RGQ6_MAGGR Putative uncharacterized protein OS=Magna... 33 8.8

>tr|B6NSQ5|B6NSQ5_BRAFL Putative uncharacterized protein
OS=Branchiostoma floridae GN=BRAFLDRAFT_128701 PE=4 SV=1
Length = 1360

Score = 35.0 bits (79), Expect = 2.3
Identities = 20/64 (31%), Positives = 27/64 (42%)
Frame = -1

Query: 498 TTSKEESPPPMDAMEDREETSGQPPSNC*KASPKEGPARVIGLDTPSEKYKETATTKHEI 319
T+ K+ SPP + D EET S ++ E R GLD P +TK E
Sbjct: 1181 TSGKKRSPPSSATVSDTEETETDRYSRALNSTTSEDTVRYAGLDRPVSSSSPKKSTKSER 1240

Query: 318 EREK 307
+ K
Sbjct: 1241 QTAK 1244


>tr|B5DHZ0|B5DHZ0_DROPS GA25805 OS=Drosophila pseudoobscura
pseudoobscura GN=GA25805 PE=4 SV=1
Length = 18482

Score = 34.7 bits (78), Expect = 3.0
Identities = 22/65 (33%), Positives = 32/65 (49%)
Frame = -1

Query: 525 KIGIETSRVTTSKEESPPPMDAMEDREETSGQPPSNC*KASPKEGPARVIGLDTPSEKYK 346
K I+ TT+ EE+P P A EE + QP + E A V+ ++ P+E
Sbjct: 14333 KAVIDKLTTTTTPEETPTPATATAAAEEEAAQP-----QQEVPEKTAIVVAVEAPAEVAT 14387

Query: 345 ETATT 331
ETAT+
Sbjct: 14388 ETATS 14392


>tr|A6QLR2|A6QLR2_BOVIN LARS protein OS=Bos taurus GN=LARS PE=2 SV=1
Length = 1176

Score = 33.9 bits (76), Expect = 5.1
Identities = 20/55 (36%), Positives = 29/55 (52%)
Frame = -3

Query: 259 PSDISFFIANHTATTPKGLTLWDVAIVYQRMAQGLLINLHGMPKSEPQKLSLPKA 95
P+ +S+F+ NH A P+ W VA+ R LL+N M KS L+L +A
Sbjct: 679 PNHLSYFLYNHVAMWPEECDKWPVAV---RANGHLLLNSEKMSKSTGNFLTLSQA 730


>tr|B6PDA9|B6PDA9_BRAFL Putative uncharacterized protein
OS=Branchiostoma floridae GN=BRAFLDRAFT_131162 PE=4 SV=1
Length = 3043

Score = 33.9 bits (76), Expect = 5.2
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 10/60 (16%)
Frame = -1

Query: 498 TTSKEESPPPMDAM---------EDREETSGQPPSNC*KASPKEGPARVI-GLDTPSEKY 349
T + E+SP P + + E EE QPPS A +E P + G+D P+E+Y
Sbjct: 582 TKASEDSPSPKEEISTPDDEKDQESEEEEKSQPPSTKQPAKEEEDPQSIAEGVDAPAEEY 641


>tr|Q6AX83|Q6AX83_XENLA MGC82093 protein OS=Xenopus laevis GN=lars
PE=2 SV=1
Length = 1178

Score = 33.5 bits (75), Expect = 6.6
Identities = 20/55 (36%), Positives = 29/55 (52%)
Frame = -3

Query: 259 PSDISFFIANHTATTPKGLTLWDVAIVYQRMAQGLLINLHGMPKSEPQKLSLPKA 95
P+ +S+F+ NH A P+ W VA+ R LL+N M KS L+L +A
Sbjct: 681 PNHLSYFLYNHVAMWPEDSGKWPVAV---RANGHLLLNSEKMSKSTGNFLTLSEA 732


>tr|Q5EB29|Q5EB29_XENTR MGC97760 protein OS=Xenopus tropicalis
GN=lars PE=2 SV=1
Length = 1177

Score = 33.5 bits (75), Expect = 6.6
Identities = 20/55 (36%), Positives = 29/55 (52%)
Frame = -3

Query: 259 PSDISFFIANHTATTPKGLTLWDVAIVYQRMAQGLLINLHGMPKSEPQKLSLPKA 95
P+ +S+F+ NH A P+ W VA+ R LL+N M KS L+L +A
Sbjct: 680 PNHLSYFLYNHVAMWPEDSGKWPVAV---RANGHLLLNSEKMSKSTGNFLTLSEA 731


>tr|B6QET6|B6QET6_PENMA Putative uncharacterized protein
OS=Penicillium marneffei ATCC 18224 GN=PMAA_080410 PE=4
SV=1
Length = 1434

Score = 33.5 bits (75), Expect = 6.7
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Frame = -1

Query: 513 ETSRVTTSKEESPPPMDAMED---REETSGQPPSNC*KASPKEGPA 385
E S EESPPP + + D +E +G+PP+ +A P+E PA
Sbjct: 992 EESSAAEPVEESPPPPEVLSDEPAKEVVAGEPPAA--EAQPEEAPA 1035


>tr|B6P275|B6P275_BRAFL Putative uncharacterized protein
OS=Branchiostoma floridae GN=BRAFLDRAFT_101871 PE=4 SV=1
Length = 207

Score = 33.1 bits (74), Expect = 8.6
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = -3

Query: 298 QQGMAPAPRCSASPSDISFFIANHTATTPKGLTLWD 191
Q G P P CS SP+ S F + T ++ +GLT+ D
Sbjct: 107 QSGSPPLPVCSVSPAHFSKFCSRSTNSSGRGLTVTD 142


>tr|B4NRH2|B4NRH2_DROWI GK18648 OS=Drosophila willistoni GN=GK18648
PE=4 SV=1
Length = 299

Score = 33.1 bits (74), Expect = 8.6
Identities = 19/77 (24%), Positives = 37/77 (48%)
Frame = -2

Query: 494 PARKNHHRQWMPWRIERRPRVNPQVIAKKHHLKRVQQG*LAWTLQARNIKKLQQQSMK*R 315
P ++NH + R ER + ++ K+ H KR+ Q ++LQ + + +
Sbjct: 180 PQQENHRERRQEERRERERQHRERLHQKRIHQKRIHQ------------ERLQWERRQMQ 227

Query: 314 ERRGESTRDGSCSQMQC 264
ERR + R+ C +++C
Sbjct: 228 ERREQERRELECRELEC 244


>tr|A4RGQ6|A4RGQ6_MAGGR Putative uncharacterized protein
OS=Magnaporthe grisea GN=MGG_08015 PE=4 SV=1
Length = 351

Score = 33.1 bits (74), Expect = 8.8
Identities = 20/57 (35%), Positives = 29/57 (50%)
Frame = -1

Query: 465 DAMEDREETSGQPPSNC*KASPKEGPARVIGLDTPSEKYKETATTKHEIEREKGRVN 295
+A E R +G PP S +GPA+ I ++TP E K A +H+ R G+ N
Sbjct: 110 EAQEARRAATGNPPPG---QSGGQGPAKKIKIETPEEIKKRLA--EHKARRALGQTN 161