BP919600
Clone id YMU001_000127_A06
Library
Length 565
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000127_A06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
TTGTTAGTTTCACTAGTAACATACTAGTGATAGCTAGTGCATGTCAAACCGTGTCCTTAT
ACATGCGGTTCCACCTAGATAGCCCAAATTATATCTCAATTGGCATGAACCACAAGGATA
TGGTAAGACCACAAAAAAAGGAAAATTGTGGCCATTGCATAATCCAATCTCCTCAGCAAT
GTCACTCGCCGGCCCCTTTGAAAAACTAATCCAAAATTTCATTTCTCCACACATAAAAAG
CATGTGCTCATTTCATCTCTATGTGGCCGGCTCTGTACTTAAATAACATTTAGTCCTCAC
ATGCCTCTCGTCGTGTACATCGTGCTTATAAACCCTCCCGCAGACATGAAGGTTATCTCC
ATATTTATGTGAAAAGTAGGTCCTCATCATGCCAAATGTACACGAACTTTCAGCAATATG
ATGTATATACCTAGCCATAGCAAAACAATGTGCCAGACTAATCCTCCACCTTCATGTGAG
GCAGGGCTATGGCTGGCTATCTGTATACAACATAGCTCTTGGCATCACATCAAGCTGATA
CTCGTTTGAGGCGTCTCACATGCCT
■■Homology search results ■■ -
sp_hit_id Q40353
Definition sp|Q40353|MMK2_MEDSA Mitogen-activated protein kinase homolog MMK2 OS=Medicago sativa
Align length 89
Score (bit) 30.8
E-value 4.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919600|Adiantum capillus-veneris mRNA, clone:
YMU001_000127_A06.
(565 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q40353|MMK2_MEDSA Mitogen-activated protein kinase homolog MM... 31 4.8
sp|Q8N2I2|ZN619_HUMAN Zinc finger protein 619 OS=Homo sapiens GN... 30 6.4

>sp|Q40353|MMK2_MEDSA Mitogen-activated protein kinase homolog MMK2
OS=Medicago sativa GN=MMK2 PE=2 SV=1
Length = 371

Score = 30.8 bits (68), Expect = 4.8
Identities = 26/89 (29%), Positives = 39/89 (43%)
Frame = +3

Query: 72 HLDSPNYISIGMNHKDMVRPQKKENCGHCIIQSPQQCHSPAPLKN*SKISFLHT*KACAH 251
H+D N +SI KD++RP +KEN H I S L + + T C +
Sbjct: 90 HMDHENVMSI----KDIIRPPQKENFNHVYIVSELM---DTDLHQIIRSNQPMTDDHCRY 142

Query: 252 FISMWPALYLNNI*SSHASRRVHRAYKPS 338
F+ L + H++ +HR KPS
Sbjct: 143 FVYQ----LLRGLKYVHSANVLHRDLKPS 167


>sp|Q8N2I2|ZN619_HUMAN Zinc finger protein 619 OS=Homo sapiens
GN=ZNF619 PE=2 SV=1
Length = 560

Score = 30.4 bits (67), Expect = 6.4
Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 3/53 (5%)
Frame = +1

Query: 394 KCTRTFSNMMYIPSHSKTMCQTNPPPSCEAGL---WLAICIQHSSWHHIKLIL 543
+C +TFS + + H + P E G W A IQH WH K ++
Sbjct: 416 ECGKTFSQKITLVQHQRVHTGEKPYECKECGKAFRWNASFIQHQKWHTRKKLI 468


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919600|Adiantum capillus-veneris mRNA, clone:
YMU001_000127_A06.
(565 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******