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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP919606
Clone id YMU001_000127_A12
Library
Length 403
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000127_A12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
CAGAAGCGTGAGTTTAAGCAATTCGGTATCTAGCATTCCTGGGCACATACCTTTAAGAAG
AACATGAGTGTATGAAACAAATTGGTGTACACATTGATGTAGGTTGTAAGTGGGTTCTTA
CTCTGGACGTGGCTTGAAAATACAAGAAAATCCGAACATCTCACACAGCAGACATCTGTC
TGGTCTCCCAGACTTCAACCCCTTGCATATGCTTGCGTGCAACAAACAGACGCTGCCCAC
CTGCATCAAGGTTTGTGATCTCATGCCCACCATGCCGTCTACTGTGTTCGACAAAATTCC
TTCGAAATGAAGTCTCCCAGTATTCTCTATCAGCCACATCCACTTCTGTTCCGGCAAGCG
GCACCTCTGACCATACCTCAAGATCGCTAGCCCGCGTACAAAA
■■Homology search results ■■ -
sp_hit_id Q4R6V5
Definition sp|Q4R6V5|CS036_MACFA Uncharacterized protein C19orf36 homolog OS=Macaca fascicularis
Align length 49
Score (bit) 30.4
E-value 2.8
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919606|Adiantum capillus-veneris mRNA, clone:
YMU001_000127_A12.
         (403 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q4R6V5|CS036_MACFA Uncharacterized protein C19orf36 homolog O...    30   2.8  
sp|Q1ZYL8|CS036_HUMAN Uncharacterized protein C19orf36 OS=Homo s...    30   3.7  
sp|A0JPQ9|CHID1_RAT Chitinase domain-containing protein 1 OS=Rat...    30   3.7  
sp|Q922Q9|CHID1_MOUSE Chitinase domain-containing protein 1 OS=M...    30   3.7  
sp|P97433|RGNEF_MOUSE Rho-guanine nucleotide exchange factor OS=...    30   3.7  
sp|O14709|ZN197_HUMAN Zinc finger protein 197 OS=Homo sapiens GN...    29   6.3  
sp|Q4VZL0|YCF1_CUCSA Putative membrane protein ycf1 OS=Cucumis s...    29   6.3  
sp|P33264|CP2CR_MESAU Cytochrome P450 2C27 OS=Mesocricetus aurat...    29   6.3  
sp|Q08078|CP2CP_MESAU Cytochrome P450 2C25 OS=Mesocricetus aurat...    29   6.3  
sp|P07602|SAP_HUMAN Proactivator polypeptide OS=Homo sapiens GN=...    29   8.2  

>sp|Q4R6V5|CS036_MACFA Uncharacterized protein C19orf36 homolog
           OS=Macaca fascicularis GN=QtsA-17041 PE=2 SV=1
          Length = 219

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 18/49 (36%), Positives = 25/49 (51%)
 Frame = +1

Query: 106 VSGFLLWTWLENTRKSEHLTQQTSVWSPRLQPLAYACVQQTDAAHLHQG 252
           VSG LL  W ++T K  HL     +   +L  +A A  Q+ D   L+QG
Sbjct: 48  VSGALLTDWSDDTMKELHLAIPAEITREKLDQVATAVYQRMD--QLYQG 94


>sp|Q1ZYL8|CS036_HUMAN Uncharacterized protein C19orf36 OS=Homo
           sapiens GN=C19orf36 PE=2 SV=2
          Length = 232

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 18/49 (36%), Positives = 24/49 (48%)
 Frame = +1

Query: 106 VSGFLLWTWLENTRKSEHLTQQTSVWSPRLQPLAYACVQQTDAAHLHQG 252
           VSG LL  W ++T K  HL     +   +L  +A A  Q  D   L+QG
Sbjct: 48  VSGALLTDWSDDTMKELHLAIPAKITREKLDQVATAVYQMMD--QLYQG 94


>sp|A0JPQ9|CHID1_RAT Chitinase domain-containing protein 1 OS=Rattus
           norvegicus GN=Chid1 PE=2 SV=2
          Length = 393

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
 Frame = -1

Query: 340 DVADREYWETSFRRNFVEHSRRHGGHEIT---NLDAGGQRLFVARKHMQGVEVWETRQ 176
           D   R  W++    +F E+ +  GG  +     L +   RL +AR+   GV +WE  Q
Sbjct: 327 DHRPRVVWDSQAAEHFFEYKKNRGGRHVVFYPTLKSLQVRLELARELGVGVSIWELGQ 384


>sp|Q922Q9|CHID1_MOUSE Chitinase domain-containing protein 1 OS=Mus
           musculus GN=Chid1 PE=2 SV=1
          Length = 393

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
 Frame = -1

Query: 340 DVADREYWETSFRRNFVEHSRRHGGHEIT---NLDAGGQRLFVARKHMQGVEVWETRQ 176
           D   R  W++    +F E+ +  GG  +     L +   RL +AR+   GV +WE  Q
Sbjct: 327 DHRPRVVWDSQAAEHFFEYKKNRGGRHVVFYPTLKSLQVRLELARELGVGVSIWELGQ 384


>sp|P97433|RGNEF_MOUSE Rho-guanine nucleotide exchange factor OS=Mus
           musculus GN=Rgnef PE=1 SV=1
          Length = 1693

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
 Frame = +3

Query: 171 DICLVSQTSTPCI-CLRATNRRCPPASRFVISCPPCRLLCSTKFLRNEVSQYSLSATSTS 347
           D  L+ + S  C  C   T++ C  A       PPC      K+ +N+      S++   
Sbjct: 669 DKTLLGKESLQCANCKANTHKGCKDA------VPPCTKKFQEKYNKNKPQSILGSSSVRD 722

Query: 348 VPASGTSDHTSRSL 389
           VPA G S H S S+
Sbjct: 723 VPAPGLSLHPSSSM 736


>sp|O14709|ZN197_HUMAN Zinc finger protein 197 OS=Homo sapiens
           GN=ZNF197 PE=2 SV=1
          Length = 1029

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 16/47 (34%), Positives = 24/47 (51%)
 Frame = -1

Query: 310 SFRRNFVEHSRRHGGHEITNLDAGGQRLFVARKHMQGVEVWETRQMS 170
           S  RN +EH R H G +    D  G + F+ +K + G +   TR+ S
Sbjct: 772 SSNRNLIEHKRIHSGEKPYECDECG-KCFILKKSLIGHQRIHTREKS 817


>sp|Q4VZL0|YCF1_CUCSA Putative membrane protein ycf1 OS=Cucumis
           sativus GN=ycf1-A PE=3 SV=2
          Length = 1879

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 2/94 (2%)
 Frame = +3

Query: 105 CKWVLTLDVA*KYKKIRTS--HTADICLVSQTSTPCICLRATNRRCPPASRFVISCPPCR 278
           CK V+ L    K KKI TS   +      + TSTP     +T    P ++    +  P  
Sbjct: 571 CKRVVILSDLNKIKKISTSTPTSTPTSTPTSTSTPTSTPTSTPTSTPTSTS---TSTPAS 627

Query: 279 LLCSTKFLRNEVSQYSLSATSTSVPASGTSDHTS 380
           +  ST      +   + ++TSTS+PAS TS  TS
Sbjct: 628 IPASTS---TSIPASTSTSTSTSIPAS-TSTSTS 657


>sp|P33264|CP2CR_MESAU Cytochrome P450 2C27 OS=Mesocricetus auratus
           GN=CYP2C27 PE=2 SV=1
          Length = 490

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
 Frame = +3

Query: 177 CLVSQTSTPCICLRATNRR-CPPASRFVISCPPCRLLCSTKF 299
           CLV +       LR TN   C P   F++SC PC ++CS  F
Sbjct: 151 CLVEE-------LRKTNGSPCDPT--FILSCAPCNVICSIIF 183


>sp|Q08078|CP2CP_MESAU Cytochrome P450 2C25 OS=Mesocricetus auratus
           GN=CYP2C25 PE=2 SV=1
          Length = 490

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
 Frame = +3

Query: 177 CLVSQTSTPCICLRATNRR-CPPASRFVISCPPCRLLCSTKF 299
           CLV +       LR TN   C P   F++SC PC ++CS  F
Sbjct: 151 CLVEE-------LRKTNGSPCDPT--FILSCAPCNVICSIIF 183


>sp|P07602|SAP_HUMAN Proactivator polypeptide OS=Homo sapiens
           GN=PSAP PE=1 SV=2
          Length = 524

 Score = 28.9 bits (63), Expect = 8.2
 Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 4/34 (11%)
 Frame = -1

Query: 361 PLAGTEVDVADREYW----ETSFRRNFVEHSRRH 272
           PL GTE  +    YW    ET+ + N VEH +RH
Sbjct: 488 PLLGTEKCIWGPSYWCQNTETAAQCNAVEHCKRH 521
tr_hit_id B8LKP6
Definition tr|B8LKP6|B8LKP6_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 75
Score (bit) 94.0
E-value 3.0e-18
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919606|Adiantum capillus-veneris mRNA, clone:
YMU001_000127_A12.
         (403 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B8LKP6|B8LKP6_PICSI Putative uncharacterized protein OS=Picea...    94   3e-18
tr|A9RGW0|A9RGW0_PHYPA Predicted protein OS=Physcomitrella paten...    83   6e-15
tr|Q2HUH9|Q2HUH9_MEDTR K+ channel tetramerisation OS=Medicago tr...    53   7e-06
tr|Q9S7R7|Q9S7R7_ARATH T16O11.1 protein (At3g09030) (MZB10.6 pro...    53   9e-06
tr|A5A8D3|A5A8D3_TOBAC Putative uncharacterized protein JEI1 OS=...    53   9e-06
tr|A7PP21|A7PP21_VITVI Chromosome chr8 scaffold_23, whole genome...    51   3e-05
tr|Q9FN67|Q9FN67_ARATH Gb|AAD56319.1 (Putative uncharacterized p...    49   1e-04
tr|Q0WL39|Q0WL39_ARATH Putative uncharacterized protein At5g4133...    49   1e-04
tr|Q84QB5|Q84QB5_ORYSJ Os03g0264700 protein OS=Oryza sativa subs...    48   3e-04
tr|A2XEU4|A2XEU4_ORYSI Putative uncharacterized protein OS=Oryza...    47   4e-04
tr|A3AGC1|A3AGC1_ORYSJ Putative uncharacterized protein OS=Oryza...    45   0.002
tr|B2B3X3|B2B3X3_PODAN Predicted CDS Pa_6_7540 OS=Podospora anse...    35   1.9  
tr|B0JK64|B0JK64_MICAN Phosphotransacetylase OS=Microcystis aeru...    35   2.5  
tr|B6TDA2|B6TDA2_MAIZE Protein binding protein OS=Zea mays PE=2 ...    35   2.5  
tr|B3NE15|B3NE15_DROER GG16072 OS=Drosophila erecta GN=GG16072 P...    35   2.5  
tr|B6PKV6|B6PKV6_BRAFL Putative uncharacterized protein OS=Branc...    34   3.1  
tr|B1WT44|B1WT44_CYAA5 Probable fatty acid desaturase OS=Cyanoth...    34   4.2  
tr|Q7F268|Q7F268_ORYSJ Os07g0419200 protein OS=Oryza sativa subs...    34   4.2  
tr|A3BJ06|A3BJ06_ORYSJ Putative uncharacterized protein OS=Oryza...    34   4.2  
tr|A2XVE6|A2XVE6_ORYSI Putative uncharacterized protein OS=Oryza...    34   4.2  
tr|B6KXK3|B6KXK3_BRAFL Putative uncharacterized protein OS=Branc...    33   5.4  
tr|A9RAZ0|A9RAZ0_PHYPA Predicted protein OS=Physcomitrella paten...    33   5.5  
tr|A9SYW5|A9SYW5_PHYPA Predicted protein OS=Physcomitrella paten...    33   7.2  
tr|Q8X0N9|Q8X0N9_NEUCR Related to nitrate assimilation regulator...    33   9.4  

>tr|B8LKP6|B8LKP6_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 464

 Score = 94.0 bits (232), Expect = 3e-18
 Identities = 48/75 (64%), Positives = 55/75 (73%)
 Frame = -1

Query: 403 FCTRASDLEVWSEVPLAGTEVDVADREYWETSFRRNFVEHSRRHGGHEITNLDAGGQRLF 224
           FC+R  DLEVWSEVP+    +  +  E  E  FRRNFVEHSRR  GH+IT+L AGG RLF
Sbjct: 395 FCSRGEDLEVWSEVPV----ISKSSAEVEEKKFRRNFVEHSRR--GHQITSLSAGGDRLF 448

Query: 223 VARKHMQGVEVWETR 179
           VAR  MQGVEVWET+
Sbjct: 449 VARWEMQGVEVWETK 463


>tr|A9RGW0|A9RGW0_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_104545 PE=4 SV=1
          Length = 455

 Score = 83.2 bits (204), Expect = 6e-15
 Identities = 41/72 (56%), Positives = 54/72 (75%)
 Frame = -1

Query: 397 TRASDLEVWSEVPLAGTEVDVADREYWETSFRRNFVEHSRRHGGHEITNLDAGGQRLFVA 218
           ++ +D+EVWSEVPLA +     ++E+ E+SFRRN +EH RRH G EIT + AGG RLF+ 
Sbjct: 384 SQGADVEVWSEVPLAESFRPKEEKEFSESSFRRNRLEH-RRHPGQEITQMVAGGGRLFIT 442

Query: 217 RKHMQGVEVWET 182
           RK  QGVEVWE+
Sbjct: 443 RKDFQGVEVWES 454


>tr|Q2HUH9|Q2HUH9_MEDTR K+ channel tetramerisation OS=Medicago
           truncatula GN=MtrDRAFT_AC149134g11v2 PE=4 SV=1
          Length = 478

 Score = 53.1 bits (126), Expect = 7e-06
 Identities = 29/75 (38%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
 Frame = -1

Query: 403 FCTRASDLEVWSEVPLAGTEVDVADREY-WETSFRRNFVEHSRRHGGHEITNLDAGGQRL 227
           F  R  +LEVWS V          DRE   E  +RRNFV+         I  ++ GG RL
Sbjct: 394 FVGRGGELEVWSRVKEVVECESERDRESDGEGVYRRNFVDKREDSEKGVIVKIEGGGDRL 453

Query: 226 FVARKHMQGVEVWET 182
           F++R+ ++G+EVWE+
Sbjct: 454 FISREDVEGIEVWES 468


>tr|Q9S7R7|Q9S7R7_ARATH T16O11.1 protein (At3g09030) (MZB10.6
           protein) OS=Arabidopsis thaliana GN=MZB10.6 PE=2 SV=1
          Length = 460

 Score = 52.8 bits (125), Expect = 9e-06
 Identities = 31/77 (40%), Positives = 41/77 (53%)
 Frame = -1

Query: 394 RASDLEVWSEVPLAGTEVDVADREYWETSFRRNFVEHSRRHGGHEITNLDAGGQRLFVAR 215
           R   LEVWS V          ++   +   RRNFV+         I+ ++AGG RLFV+R
Sbjct: 389 RGGALEVWSSVK---------EKTSGDPIRRRNFVDKEDDSKRGMISKIEAGGDRLFVSR 439

Query: 214 KHMQGVEVWETRQMSAV 164
           + M+GVEVWET   S V
Sbjct: 440 ECMEGVEVWETSSFSGV 456


>tr|A5A8D3|A5A8D3_TOBAC Putative uncharacterized protein JEI1
           OS=Nicotiana tabacum GN=JEI1 PE=2 SV=1
          Length = 463

 Score = 52.8 bits (125), Expect = 9e-06
 Identities = 27/74 (36%), Positives = 45/74 (60%)
 Frame = -1

Query: 403 FCTRASDLEVWSEVPLAGTEVDVADREYWETSFRRNFVEHSRRHGGHEITNLDAGGQRLF 224
           FC++  +LE+WSEV +  +   + DR      FR+N +  ++   G++IT+   GG ++F
Sbjct: 393 FCSKGGNLELWSEVLIGNS---IKDRV-----FRKNSMGRAKDICGNKITHFSFGGNKMF 444

Query: 223 VARKHMQGVEVWET 182
           V RK  Q VEVW++
Sbjct: 445 VTRKDQQFVEVWQS 458


>tr|A7PP21|A7PP21_VITVI Chromosome chr8 scaffold_23, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00021480001
           PE=4 SV=1
          Length = 467

 Score = 51.2 bits (121), Expect = 3e-05
 Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
 Frame = -1

Query: 403 FCTRASDLEVWSEVPLAGTEVDVADREYW--ETSFRRNFVEHSRRHGGHEITNLDAGGQR 230
           F  R   LEVWS+           +RE    E S+RRN+V+         IT ++ GG R
Sbjct: 393 FVARGGGLEVWSQ-----------ERENMVSEGSYRRNYVDKLDDLERGTITKMEGGGDR 441

Query: 229 LFVARKHMQGVEVWETRQMS 170
           LF++R+ ++G+EVWE+   S
Sbjct: 442 LFISREDVEGIEVWESSNFS 461


>tr|Q9FN67|Q9FN67_ARATH Gb|AAD56319.1 (Putative uncharacterized
           protein At5g41330) (At5g41330) OS=Arabidopsis thaliana
           GN=At5g41330 PE=2 SV=1
          Length = 458

 Score = 49.3 bits (116), Expect = 1e-04
 Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
 Frame = -1

Query: 403 FCT-RASDLEVWSEVPLAGTEVDVADREYWETSFRRNFVEHSRRHGGHEITNLDAGGQRL 227
           FC+ + S +E+WSEV + G   + +     E  FR+N +      G ++IT L  GG R+
Sbjct: 378 FCSSKGSGIELWSEV-ITGLVGNASRDVLEERVFRKNSLGKLADSGENKITGLAFGGNRM 436

Query: 226 FVARKHMQGVEVWET 182
           FV RK  Q V+VW++
Sbjct: 437 FVTRKDQQSVQVWQS 451


>tr|Q0WL39|Q0WL39_ARATH Putative uncharacterized protein At5g41330
           OS=Arabidopsis thaliana GN=At5g41330 PE=2 SV=1
          Length = 458

 Score = 49.3 bits (116), Expect = 1e-04
 Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
 Frame = -1

Query: 403 FCT-RASDLEVWSEVPLAGTEVDVADREYWETSFRRNFVEHSRRHGGHEITNLDAGGQRL 227
           FC+ + S +E+WSEV + G   + +     E  FR+N +      G ++IT L  GG R+
Sbjct: 378 FCSSKGSGIELWSEV-ITGLVGNASRDVLEERVFRKNSLGKLADSGENKITGLAFGGNRM 436

Query: 226 FVARKHMQGVEVWET 182
           FV RK  Q V+VW++
Sbjct: 437 FVTRKDQQSVQVWQS 451


>tr|Q84QB5|Q84QB5_ORYSJ Os03g0264700 protein OS=Oryza sativa subsp.
           japonica GN=OJ1012B02.6 PE=4 SV=1
          Length = 481

 Score = 47.8 bits (112), Expect = 3e-04
 Identities = 32/89 (35%), Positives = 44/89 (49%), Gaps = 11/89 (12%)
 Frame = -1

Query: 403 FCTRASDLEVWS--EVPLAGT---------EVDVADREYWETSFRRNFVEHSRRHGGHEI 257
           F +R   LEVWS  E    GT         + ++ +    E  FR  +V+         I
Sbjct: 381 FVSRKDGLEVWSRLEEQSNGTANLAEQTRAKENINNEGINENCFRSCYVDTEEDADRGMI 440

Query: 256 TNLDAGGQRLFVARKHMQGVEVWETRQMS 170
             ++ GG RLFV R+ MQGVEVWET Q++
Sbjct: 441 HIMEGGGDRLFVTREEMQGVEVWETSQLA 469


>tr|A2XEU4|A2XEU4_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_10858 PE=4 SV=1
          Length = 481

 Score = 47.4 bits (111), Expect = 4e-04
 Identities = 32/89 (35%), Positives = 43/89 (48%), Gaps = 11/89 (12%)
 Frame = -1

Query: 403 FCTRASDLEVWS--EVPLAGT---------EVDVADREYWETSFRRNFVEHSRRHGGHEI 257
           F +R   LEVWS  E    GT         + ++      E  FR  +V+         I
Sbjct: 381 FVSRKDGLEVWSRLEEQSNGTANLAEQTRAKENINSEGINENCFRSCYVDTEEDADRGMI 440

Query: 256 TNLDAGGQRLFVARKHMQGVEVWETRQMS 170
             ++ GG RLFV R+ MQGVEVWET Q++
Sbjct: 441 HIMEGGGDRLFVTREEMQGVEVWETSQLA 469