BP919607 |
Clone id |
YMU001_000127_B01 |
Library |
YMU01 |
Length |
590 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000127_B01. |
Accession |
BP919607 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL3489Contig1 |
Sequence |
CATACATCGAAATAACTTTCTTAGAGATACAACTCAAGCCTTTCAGAGGCCACCAACAAA CCACCTTGCTTCTTTAACTGCATTTGCAAACTATTCACATCAACTATACACATATGCACT CGTGACTCTAGACTTATCACTTCTCCTTATAAAAATAAGCCCTGTACATACCCAGATTGG GTATGGCTTGCCATAATTCTTACACTTTCAGCAAGATAAGAAATCCTGCCAATGCACGTG AAGGATACATATCATATGCAGAACCTTTCACACCAGACAACCTCTGAATACTATGTACAG TGCTCAATCATTCACTCTGGAAAGCCAGGTATGTCCAAAGGTTAACCTTTCTTTTCCCGG TGCCAGTCGTAACACTCGTGCAAAACAAACTGCAAATCTTTCTTTAACCCATGTCCACCT CCGGCGCAAATAGATTGGCCATATAACCATCGAACCCAGCCTGTCTTCCATCCAGAATAA GAGCTTGGTTAAATGCCTGGCTTCCAAAATATGTGTCACCACTCTTTGAGCAAGCATCCA TAACAGTTCGGCACACCACCATATCTGGTTCCACTGGTAAATTCTCTATC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
A8MQA3 |
Definition |
sp|A8MQA3|PP330_ARATH Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana |
Align length |
57 |
Score (bit) |
38.5 |
E-value |
0.025 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7QI70 |
Definition |
tr|A7QI70|A7QI70_VITVI Chromosome chr17 scaffold_101, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
59 |
Score (bit) |
42.0 |
E-value |
0.026 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP919607|Adiantum capillus-veneris mRNA, clone: YMU001_000127_B01. (590 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7QI70|A7QI70_VITVI Chromosome chr17 scaffold_101, whole geno... 42 0.026 tr|A5B7G0|A5B7G0_VITVI Putative uncharacterized protein OS=Vitis... 42 0.026 tr|A7Q1A2|A7Q1A2_VITVI Chromosome chr10 scaffold_43, whole genom... 42 0.034 tr|A5AT77|A5AT77_VITVI Putative uncharacterized protein OS=Vitis... 42 0.034 tr|A7PRP0|A7PRP0_VITVI Chromosome chr14 scaffold_27, whole genom... 41 0.044 tr|A7PL13|A7PL13_VITVI Chromosome chr7 scaffold_20, whole genome... 40 0.075 tr|A5AZY0|A5AZY0_VITVI Putative uncharacterized protein OS=Vitis... 40 0.075 tr|Q6F382|Q6F382_ORYSJ Os03g0795200 protein OS=Oryza sativa subs... 40 0.099 tr|A3ANL0|A3ANL0_ORYSJ Putative uncharacterized protein OS=Oryza... 40 0.099 tr|A2XMV7|A2XMV7_ORYSI Putative uncharacterized protein OS=Oryza... 40 0.099 tr|B4F908|B4F908_MAIZE Putative uncharacterized protein OS=Zea m... 39 0.17 tr|Q10MC4|Q10MC4_ORYSJ Os03g0314400 protein OS=Oryza sativa subs... 39 0.29 tr|O49549|O49549_ARATH Putative uncharacterized protein F7J7.10 ... 39 0.29 tr|A7PCR5|A7PCR5_VITVI Chromosome chr17 scaffold_12, whole genom... 39 0.29 tr|A2XFZ4|A2XFZ4_ORYSI Putative uncharacterized protein OS=Oryza... 39 0.29 tr|A7QGA5|A7QGA5_VITVI Chromosome undetermined scaffold_91, whol... 38 0.37 tr|B4FZF5|B4FZF5_MAIZE Putative uncharacterized protein OS=Zea m... 37 0.64 tr|A7PJW3|A7PJW3_VITVI Chromosome chr12 scaffold_18, whole genom... 37 0.64 tr|Q6DT52|Q6DT52_ARALP AT1G74600 (Fragment) OS=Arabidopsis lyrat... 37 0.83 tr|Q10K51|Q10K51_ORYSJ Pentatricopeptide, putative (Putative unc... 37 0.83 tr|A7QI90|A7QI90_VITVI Chromosome chr17 scaffold_101, whole geno... 37 0.83 tr|A7PD58|A7PD58_VITVI Chromosome chr17 scaffold_12, whole genom... 37 0.83 tr|A2Q4J6|A2Q4J6_MEDTR Tetratricopeptide-like helical OS=Medicag... 37 0.83 tr|Q0IZR0|Q0IZR0_ORYSJ Os09g0555400 protein OS=Oryza sativa subs... 37 1.1 tr|A5AF05|A5AF05_VITVI Putative uncharacterized protein OS=Vitis... 37 1.1 tr|A2Z3X5|A2Z3X5_ORYSI Putative uncharacterized protein OS=Oryza... 37 1.1 tr|Q6Z0F9|Q6Z0F9_ORYSJ Os08g0340900 protein OS=Oryza sativa subs... 36 1.4 tr|B8B9V6|B8B9V6_ORYSI Putative uncharacterized protein OS=Oryza... 36 1.4 tr|A7PHS8|A7PHS8_VITVI Chromosome chr17 scaffold_16, whole genom... 36 1.4 tr|A3BS46|A3BS46_ORYSJ Putative uncharacterized protein OS=Oryza... 36 1.4
>tr|A7QI70|A7QI70_VITVI Chromosome chr17 scaffold_101, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00000117001 PE=4 SV=1 Length = 592
Score = 42.0 bits (97), Expect = 0.026 Identities = 18/59 (30%), Positives = 34/59 (57%) Frame = -2
Query: 589 IENLPVEPDMVVCRTVMDACSKSGDTYFGSQAFNQALILDGRQAGFDGYMANLFAPEVD 413 ++N+P++PDM+V RT++ AC G+ +Q N L +++ ++NLFA + Sbjct: 505 VQNMPIKPDMIVWRTLLGACHTQGNISLANQVMNYLCELGPKKSEDYVLLSNLFASNAE 563
>tr|A5B7G0|A5B7G0_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_011618 PE=4 SV=1 Length = 529
Score = 42.0 bits (97), Expect = 0.026 Identities = 18/59 (30%), Positives = 34/59 (57%) Frame = -2
Query: 589 IENLPVEPDMVVCRTVMDACSKSGDTYFGSQAFNQALILDGRQAGFDGYMANLFAPEVD 413 ++N+P++PDM+V RT++ AC G+ +Q N L +++ ++NLFA + Sbjct: 442 VQNMPIKPDMIVWRTLLGACXXQGNISLANQVMNXLCELGPKKSEDYVLLSNLFASNAE 500
>tr|A7Q1A2|A7Q1A2_VITVI Chromosome chr10 scaffold_43, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00028372001 PE=4 SV=1 Length = 613
Score = 41.6 bits (96), Expect = 0.034 Identities = 21/57 (36%), Positives = 35/57 (61%) Frame = -2
Query: 589 IENLPVEPDMVVCRTVMDACSKSGDTYFGSQAFNQALILDGRQAGFDGYMANLFAPE 419 I+N+P++P+ VV RT++ AC+ G G A Q L L+ + +G ++NL+A E Sbjct: 401 IQNMPMQPNAVVWRTLLGACTIHGHLALGEVARAQLLQLEPKHSGDYVLLSNLYASE 457
>tr|A5AT77|A5AT77_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_016806 PE=4 SV=1 Length = 348
Score = 41.6 bits (96), Expect = 0.034 Identities = 21/57 (36%), Positives = 35/57 (61%) Frame = -2
Query: 589 IENLPVEPDMVVCRTVMDACSKSGDTYFGSQAFNQALILDGRQAGFDGYMANLFAPE 419 I+N+P++P+ VV RT++ AC+ G G A Q L L+ + +G ++NL+A E Sbjct: 136 IQNMPMQPNAVVWRTLLGACTIHGHLALGEVARAQLLQLEPKHSGDYVLLSNLYASE 192
>tr|A7PRP0|A7PRP0_VITVI Chromosome chr14 scaffold_27, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00022577001 PE=4 SV=1 Length = 745
Score = 41.2 bits (95), Expect = 0.044 Identities = 19/59 (32%), Positives = 32/59 (54%) Frame = -2
Query: 589 IENLPVEPDMVVCRTVMDACSKSGDTYFGSQAFNQALILDGRQAGFDGYMANLFAPEVD 413 IE++P+ PD+ ++ AC K GDT G + + + L GF ++N+FA + D Sbjct: 533 IESMPMAPDVATWGALLGACKKHGDTEMGERVGRKLIELQPDHDGFHVLLSNIFASKGD 591
>tr|A7PL13|A7PL13_VITVI Chromosome chr7 scaffold_20, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00019394001 PE=4 SV=1 Length = 812
Score = 40.4 bits (93), Expect = 0.075 Identities = 18/55 (32%), Positives = 32/55 (58%) Frame = -2
Query: 589 IENLPVEPDMVVCRTVMDACSKSGDTYFGSQAFNQALILDGRQAGFDGYMANLFA 425 IE +P+EP +V R+++ AC +G+ G A A+ D + +G ++N+FA Sbjct: 679 IEKMPIEPAAIVWRSLLSACRIAGNVELGKYAAEMAISTDPKDSGSYILLSNIFA 733
>tr|A5AZY0|A5AZY0_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_038220 PE=4 SV=1 Length = 732
Score = 40.4 bits (93), Expect = 0.075 Identities = 18/55 (32%), Positives = 32/55 (58%) Frame = -2
Query: 589 IENLPVEPDMVVCRTVMDACSKSGDTYFGSQAFNQALILDGRQAGFDGYMANLFA 425 IE +P+EP +V R+++ AC +G+ G A A+ D + +G ++N+FA Sbjct: 600 IEKMPIEPAAIVWRSLLSACRIAGNVELGKYAAEMAISTDPKDSGSYILLSNIFA 654
>tr|Q6F382|Q6F382_ORYSJ Os03g0795200 protein OS=Oryza sativa subsp. japonica GN=OSJNBb0021G19.15 PE=4 SV=1 Length = 611
Score = 40.0 bits (92), Expect = 0.099 Identities = 19/55 (34%), Positives = 30/55 (54%) Frame = -2
Query: 589 IENLPVEPDMVVCRTVMDACSKSGDTYFGSQAFNQALILDGRQAGFDGYMANLFA 425 I+ LP++P ++ RT++ AC+ GD G + F + L LD G +NL A Sbjct: 398 IDELPIKPTAILWRTLLSACAGHGDVDMGKRVFERILELDDSHGGDYVIFSNLCA 452
>tr|A3ANL0|A3ANL0_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_012382 PE=4 SV=1 Length = 611
Score = 40.0 bits (92), Expect = 0.099 Identities = 19/55 (34%), Positives = 30/55 (54%) Frame = -2
Query: 589 IENLPVEPDMVVCRTVMDACSKSGDTYFGSQAFNQALILDGRQAGFDGYMANLFA 425 I+ LP++P ++ RT++ AC+ GD G + F + L LD G +NL A Sbjct: 398 IDELPIKPTAILWRTLLSACAGHGDVDMGKRVFERILELDDSHGGDYVIFSNLCA 452
>tr|A2XMV7|A2XMV7_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_13880 PE=4 SV=1 Length = 671
Score = 40.0 bits (92), Expect = 0.099 Identities = 19/55 (34%), Positives = 30/55 (54%) Frame = -2
Query: 589 IENLPVEPDMVVCRTVMDACSKSGDTYFGSQAFNQALILDGRQAGFDGYMANLFA 425 I+ LP++P ++ RT++ AC+ GD G + F + L LD G +NL A Sbjct: 398 IDELPIKPTAILWRTLLSACAGHGDVDMGKRVFERILELDDSHGGDYVIFSNLCA 452
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